Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 3.8e-124 448.4 256 100.0
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 2.0e-72 276.6 257 60.7
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 7.5e-72 274.6 250 62.4
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 1.9e-70 270.0 257 57.6
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.2e-69 267.3 257 58.0
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 3.5e-69 265.8 257 57.6
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 5.1e-68 261.9 258 60.1
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 3.1e-65 252.7 253 53.8
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 4.4e-64 248.8 257 54.5
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 4.4e-64 248.8 257 54.5
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 7.1e-62 241.5 258 53.9
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 1.0e-60 237.7 191 64.4
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 1.0e-60 237.7 250 54.8
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 2.3e-60 236.5 258 54.7
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 2.3e-60 236.5 257 53.7
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 6.6e-60 235.0 190 63.2
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 9.5e-59 231.1 247 53.4
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 2.1e-58 229.9 263 51.7
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 2.8e-58 229.6 252 50.0
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 6.2e-58 228.4 257 51.4
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 6.2e-58 228.4 253 49.8
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 1.1e-57 227.6 202 55.9
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.8e-57 226.9 254 50.4
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 5.2e-57 225.3 263 47.5
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 8.9e-57 224.6 258 49.6
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 1.2e-56 224.2 323 44.0
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 5.8e-56 221.9 261 48.7
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 2.2e-55 219.9 257 49.0
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 2.9e-55 219.5 266 48.1
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 2.9e-55 219.5 263 46.8
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 1.1e-54 217.6 253 47.4
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 1.1e-54 217.6 202 57.9
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 1.4e-54 217.2 266 46.6
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 1.4e-54 217.2 253 47.8
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 2.4e-54 216.5 268 42.9
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 7.1e-54 214.9 263 45.6
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 3.5e-53 212.6 258 47.3
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 1.3e-52 210.7 253 46.6
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 3.0e-52 209.5 186 59.7
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 3.9e-52 209.1 202 56.4
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 5.1e-52 208.8 257 45.1
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 6.6e-52 208.4 268 46.6
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 8.7e-52 208.0 252 46.4
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.5e-51 207.2 253 48.2
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 1.9e-51 206.8 264 45.5
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 2.5e-51 206.5 250 46.4
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 2.5e-51 206.5 258 45.7
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 2.5e-51 206.5 257 48.6
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 4.3e-51 205.7 202 55.4
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 5.6e-51 205.3 260 43.8
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 9.6e-51 204.5 178 60.7
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 2.1e-50 203.4 213 49.8
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 2.8e-50 203.0 260 43.8
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 2.8e-50 203.0 204 54.4
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 4.7e-50 202.2 271 46.9
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 6.2e-50 201.8 254 46.5
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.4e-49 200.7 258 47.3
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 1.8e-49 200.3 178 59.6
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 1.8e-49 200.3 178 60.1
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.1e-49 199.5 258 46.9
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 4.0e-49 199.1 258 46.1
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 5.3e-49 198.7 258 46.1
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.3e-49 198.7 258 46.1
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 5.3e-49 198.7 263 44.1
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 5.3e-49 198.7 182 56.6
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 6.9e-49 198.4 199 50.3
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 9.0e-49 198.0 178 59.0
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.2e-48 197.6 258 45.7
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 1.5e-48 197.2 186 55.9
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 9.9e-48 194.5 203 53.2
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 9.9e-48 194.5 262 41.6
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 1.6e-45 187.2 261 46.4
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 4.6e-45 185.7 179 53.6
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 1.1e-43 181.0 263 42.2
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 7.3e-43 178.3 249 44.6
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 3.6e-42 176.0 145 57.9
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 1.8e-41 173.7 185 51.4
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 5.8e-40 168.7 121 69.4
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 1.9e-38 163.7 119 63.9
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 5.4e-38 162.2 176 54.0
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 7.1e-38 161.8 177 52.0
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 7.1e-38 161.8 177 52.5
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 7.1e-38 161.8 202 48.5
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.2e-37 161.0 176 53.4
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 1.6e-37 160.6 177 51.4
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 2.7e-37 159.8 175 52.6
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 3.5e-37 159.5 176 53.4
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 7.9e-37 158.3 266 37.6
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 3.9e-36 156.0 190 46.3
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 8.7e-36 154.8 190 46.3
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 2.5e-35 153.3 180 50.6
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 3.3e-35 152.9 254 38.6
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 5.3e-33 145.6 308 37.0
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 6.9e-33 145.2 305 36.1
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 1.4e-25 120.9 185 35.7
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 2.6e-24 116.7 117 50.4
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 1.9e-22 110.5 112 50.9
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 2.3e-20 103.6 117 46.2
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 3.0e-20 103.2 234 34.6
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 2.5e-19 100.1 115 47.0
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 2.4e-17 93.6 240 28.8
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 5.5e-14 82.4 115 45.2
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 3.0e-12 76.6 95 45.3
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 8.8e-12 75.1 210 26.7
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 1.5e-11 74.3 60 56.7
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 1.5e-08 64.3 62 46.8
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 5.9e-08 62.4 112 34.8
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.7e-07 60.8 158 32.3
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 1.7e-07 60.8 59 42.4
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 1.7e-07 60.8 89 40.4
PRCOL_00003801 Prasinoderma coloniale HOM05D013257 ORTHO05D015313 7.2e-06 55.5 112 27.7


User provided reference genes

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