Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A516T99 Lonicera japonica HOM05D000106 ORTHO05D000160 3.3e-26 120.9 60 100.0
Dinv30888 Davidia involucrata HOM05D000106 ORTHO05D000160 2.5e-10 68.2 55 65.5
DCAR_011925 Daucus carota HOM05D000106 ORTHO05D000160 8.1e-09 63.2 44 63.6
DCAR_027664 Daucus carota HOM05D000106 ORTHO05D000160 8.1e-09 63.2 53 56.6
Ciclev10027271m.g Citrus clementina HOM05D000106 ORTHO05D000160 1.8e-08 62.0 52 59.6
MELO3C024421.2 Cucumis melo HOM05D000106 ORTHO05D000160 2.0e-07 58.5 53 50.9
DCAR_031401 Daucus carota HOM05D000106 ORTHO05D000160 3.4e-07 57.8 53 52.8
TPR.G26944 Trifolium pratense HOM05D000106 ORTHO05D000160 7.6e-07 56.6 52 53.8
Medtr2g100470 Medicago truncatula HOM05D000106 ORTHO05D000160 9.9e-07 56.2 46 56.5
AL190U10020 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 2.9e-06 54.7 47 48.9
DCAR_029758 Daucus carota HOM05D000106 ORTHO05D000160 2.9e-06 54.7 53 52.8
BraA08t33925Z Brassica rapa HOM05D000106 ORTHO05D019706 3.7e-06 54.3 44 59.1
AT4G29450 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 4.9e-06 53.9 51 54.9
FAN09G0237 Fragaria x ananassa HOM05D000106 ORTHO05D000160 4.9e-06 53.9 53 45.3
QL05p017913 Quercus lobata HOM05D000106 ORTHO05D000160 4.9e-06 53.9 51 52.9
Atru.chr1.3590 Acer truncatum HOM05D000106 ORTHO05D000160 6.4e-06 53.5 43 58.1
CsaV3_4G032220 Cucumis sativus L. HOM05D005440 ORTHO05D007314 8.4e-06 53.1 45 53.3
QL93p1866_0182 Quercus lobata HOM05D000106 ORTHO05D000160 8.4e-06 53.1 48 47.9


User provided reference genes

Program Settings