Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A479T52 Lonicera japonica HOM05D006033 ORTHO05D036448 9.2e-19 95.9 49 100.0
Lsat_1_v5_gn_8_133680 Lactuca sativa HOM05D006033 ORTHO05D036448 2.1e-07 58.2 88 47.7
MBI16_g07739_MAGBIO Magnolia biondii HOM05D006033 ORTHO05D007112 2.8e-07 57.8 87 47.1
Glyma.17G130200 Glycine max HOM05D006033 ORTHO05D007112 4.7e-07 57.0 102 43.1
EL10Ac5g11413 Beta vulgaris HOM05D006033 ORTHO05D007112 8.1e-07 56.2 102 43.1
AUR62029613 Chenopodium quinoa HOM05D006033 ORTHO05D007112 8.1e-07 56.2 102 43.1
AUR62034824 Chenopodium quinoa HOM05D006033 ORTHO05D007112 8.1e-07 56.2 102 43.1
Nn4g22317 Nelumbo nucifera HOM05D006033 ORTHO05D007112 8.1e-07 56.2 102 43.1
Atru.chr6.1793 Acer truncatum HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Actinidia08871 Actinidia chinensis HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Aqoxy5G03378 Aquilegia oxysepala HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
CANSAT80G2253 Cannabis sativa HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Cpa.g.sc13.116 Carica papaya HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Cfa018795 Carpinus fangiana HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
CiPaw.12G043200 Carya illinoinensis HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Ca_16046_v3 Cicer arietinum L. HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Haze_07138 Corylus avellana HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
DCAR_021619 Daucus carota HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Dinv11172 Davidia involucrata HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Duzib205G1080 Durio zibethinus HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Eucgr.K02726 Eucalyptus grandis HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
FvH4_5g08320 Fragaria vesca HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
FAN08G2192 Fragaria x ananassa HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
FAN13G1806 Fragaria x ananassa HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
FAN18G2263 Fragaria x ananassa HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Gohir.A12G189600 Gossypium hirsutum HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Gohir.D12G192000 Gossypium hirsutum HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Gorai.008G206300 Gossypium raimondii HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Lj5A96T53 Lonicera japonica HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
MD14G1157100 Malus domestica HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Oeu032516.1 Olea europaea HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Psat5g051280 Pisum sativum HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Prupe.5G151100 Prunus persica HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
RcHm_v2.0_Chr7g0190201 Rosa chinensis HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
SGA_v2.0_scaffold121G33024 Striga asiatica HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
Thecc.03G129200 Theobroma cacao HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
TPR.G14208 Trifolium pratense HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
TAR374G1541 Trochodendron aralioides HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
vmacro16716 Vaccinium macrocarpon HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
GSVIVG01008543001 Vitis vinifera HOM05D006033 ORTHO05D007112 1.1e-06 55.8 102 42.2
MD06G1141900 Malus domestica HOM05D006033 ORTHO05D007112 1.4e-06 55.5 102 41.2
PSO017G2963 Papaver somniferum HOM05D006033 ORTHO05D007112 1.4e-06 55.5 102 41.2
PSO478G4249 Papaver somniferum HOM05D006033 ORTHO05D007112 1.4e-06 55.5 102 41.2
QL10p002899 Quercus lobata HOM05D006033 ORTHO05D007112 1.4e-06 55.5 102 41.2
HPP92_007005 Vanilla planifolia HOM05D006033 ORTHO05D007112 1.4e-06 55.5 102 41.2
arahy.Tifrunner.gnm1.ann1.YV4Q3G Arachis hypogaea HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 41.2
arahy.Tifrunner.gnm1.ann1.Z456W4 Arachis hypogaea HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 41.2
CAN.G352.14 Capsicum annuum HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 42.2
ClCG03G003760 Citrullus lanatus HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 41.2
CsaV3_1G009650 Cucumis sativus L. HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 41.2
Migut.E01431 Erythranthe guttata HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 41.2
Lj1g0005507 Lotus japonicus HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 41.2
Manes.06G119600 Manihot esculenta HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 41.2
Medtr3g099240 Medicago truncatula HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 41.2
Phvul.003G211200 Phaseolus vulgaris HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 41.2
Sed0010085 Sechium edule HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 41.2
VMungo1215G0762 Vigna mungo HOM05D006033 ORTHO05D007112 2.3e-06 54.7 102 41.2
Actinidia36806 Actinidia chinensis HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
MELO3C002361.2 Cucumis melo HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
Glyma.05G048200 Glycine max HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
HanXRQChr05g0155041 Helianthus annuus HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
Lsat_1_v5_gn_5_13720 Lactuca sativa HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
Nitab4.5_0003282g0110 Nicotiana tabacum HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
Nitab4.5_0004750g0050 Nicotiana tabacum HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
Peaxi162Scf00089g00624 Petunia axillaris HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
PGR044G2394 Punica granatum HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
Solyc03g111340.4 Solanum lycopersicum HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
Sopen03g030470 Solanum pennellii HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
PGSC0003DMG401015240 Solanum tuberosum HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
TWI23G0550 Tripterygium wilfordii HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
TWI39G0081 Tripterygium wilfordii HOM05D006033 ORTHO05D007112 3.1e-06 54.3 102 41.2
MSTRG.1619 Avicennia marina HOM05D006033 ORTHO05D007112 4.0e-06 53.9 102 42.2
CDE02G1207 Ceratophyllum demersum HOM05D006033 ORTHO05D007112 4.0e-06 53.9 102 41.2
Aa31LG1G19340 Aethionema arabicum HOM05D006033 ORTHO05D007112 5.2e-06 53.5 102 40.2
Ciclev10031478m.g Citrus clementina HOM05D006033 ORTHO05D007112 5.2e-06 53.5 102 40.2
Medtr2g045230 Medicago truncatula HOM05D006033 ORTHO05D007112 5.2e-06 53.5 102 40.2
Potri.015G096300 Populus trichocarpa HOM05D006033 ORTHO05D007112 5.2e-06 53.5 102 41.2
Sabra15G0117100 Salix brachista HOM05D006033 ORTHO05D007112 5.2e-06 53.5 102 41.2
Sc10g0010470 Simmondsia chinensis HOM05D006033 ORTHO05D007112 5.2e-06 53.5 102 41.2
Lalb_Chr08g0237161 Lupinus albus HOM05D006033 ORTHO05D007112 6.8e-06 53.1 102 40.2
SalBow8G5593 Salvia bowleyana HOM05D006033 ORTHO05D007112 6.8e-06 53.1 102 41.2
FAN04G2747 Fragaria x ananassa HOM05D006033 ORTHO05D007112 8.9e-06 52.8 102 41.2
Hund02441 Selenicereus undatus HOM05D006033 ORTHO05D007112 8.9e-06 52.8 100 41.0


User provided reference genes

Program Settings