Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A479G53 Lonicera japonica HOM05D006033 ORTHO05D007112 2.4e-101 372.1 179 100.0
TAR374G1541 Trochodendron aralioides HOM05D006033 ORTHO05D007112 2.2e-46 189.5 207 51.7
Nn4g22317 Nelumbo nucifera HOM05D006033 ORTHO05D007112 3.8e-46 188.7 182 56.0
Cc03_g15140 Coffea canephora HOM05D006033 ORTHO05D007112 7.2e-45 184.5 206 50.5
GSVIVG01008543001 Vitis vinifera HOM05D006033 ORTHO05D007112 9.4e-45 184.1 207 50.7
Eucgr.K02726 Eucalyptus grandis HOM05D006033 ORTHO05D007112 1.6e-44 183.3 202 51.0
Ciclev10031478m.g Citrus clementina HOM05D006033 ORTHO05D007112 1.0e-43 180.6 207 51.7
TWI23G0550 Tripterygium wilfordii HOM05D006033 ORTHO05D007112 6.7e-43 177.9 207 50.7
Thecc.03G129200 Theobroma cacao HOM05D006033 ORTHO05D007112 1.1e-42 177.2 208 51.0
DCAR_021619 Daucus carota HOM05D006033 ORTHO05D007112 1.5e-42 176.8 177 54.8
Manes.06G119600 Manihot esculenta HOM05D006033 ORTHO05D007112 2.5e-42 176.0 204 50.0
Atru.chr6.1793 Acer truncatum HOM05D006033 ORTHO05D007112 3.3e-42 175.6 204 50.0
QL10p002899 Quercus lobata HOM05D006033 ORTHO05D007112 3.3e-42 175.6 206 48.1
Nitab4.5_0003282g0110 Nicotiana tabacum HOM05D006033 ORTHO05D007112 4.3e-42 175.3 171 56.1
Potri.015G096300 Populus trichocarpa HOM05D006033 ORTHO05D007112 2.2e-41 172.9 207 49.3
Aqoxy5G03378 Aquilegia oxysepala HOM05D006033 ORTHO05D007112 2.8e-41 172.6 207 47.8
CANSAT80G2253 Cannabis sativa HOM05D006033 ORTHO05D007112 2.8e-41 172.6 202 48.0
Lj5A96T53 Lonicera japonica HOM05D006033 ORTHO05D007112 3.7e-41 172.2 206 48.5
MD14G1157100 Malus domestica HOM05D006033 ORTHO05D007112 3.7e-41 172.2 206 48.1
Prupe.5G151100 Prunus persica HOM05D006033 ORTHO05D007112 3.7e-41 172.2 200 50.0
Cpa.g.sc13.116 Carica papaya HOM05D006033 ORTHO05D007112 4.8e-41 171.8 206 47.1
COL.COLO4_28129 Corchorus olitorius HOM05D006033 ORTHO05D007112 4.8e-41 171.8 207 49.3
Os02g0506500 Oryza sativa ssp. japonica HOM05D006033 ORTHO05D007112 4.8e-41 171.8 193 49.7
Solyc03g111340.4 Solanum lycopersicum HOM05D006033 ORTHO05D007112 6.3e-41 171.4 206 49.0
Sopen03g030470 Solanum pennellii HOM05D006033 ORTHO05D007112 6.3e-41 171.4 206 49.0
CiPaw.12G043200 Carya illinoinensis HOM05D006033 ORTHO05D007112 8.2e-41 171.0 196 50.5
ClCG03G003760 Citrullus lanatus HOM05D006033 ORTHO05D007112 8.2e-41 171.0 190 51.1
Peaxi162Scf00089g00624 Petunia axillaris HOM05D006033 ORTHO05D007112 8.2e-41 171.0 206 48.5
PGSC0003DMG401015240 Solanum tuberosum HOM05D006033 ORTHO05D007112 8.2e-41 171.0 206 49.0
MBI16_g07739_MAGBIO Magnolia biondii HOM05D006033 ORTHO05D007112 1.1e-40 170.6 176 54.5
PGR044G2394 Punica granatum HOM05D006033 ORTHO05D007112 1.4e-40 170.2 196 50.5
Sc10g0010470 Simmondsia chinensis HOM05D006033 ORTHO05D007112 1.8e-40 169.9 206 47.6
Duzib205G1080 Durio zibethinus HOM05D006033 ORTHO05D007112 3.1e-40 169.1 207 49.3
CSS0003528 Camellia sinensis var. sinensis HOM05D006033 ORTHO05D007112 4.1e-40 168.7 200 49.5
Gohir.A12G189600 Gossypium hirsutum HOM05D006033 ORTHO05D007112 5.3e-40 168.3 208 47.6
MD06G1141900 Malus domestica HOM05D006033 ORTHO05D007112 5.3e-40 168.3 202 48.0
Sabra15G0117100 Salix brachista HOM05D006033 ORTHO05D007112 5.3e-40 168.3 207 47.8
arahy.Tifrunner.gnm1.ann1.Z456W4 Arachis hypogaea HOM05D006033 ORTHO05D007112 6.9e-40 167.9 198 49.5
CsaV3_1G009650 Cucumis sativus L. HOM05D006033 ORTHO05D007112 6.9e-40 167.9 191 49.7
Glyma.17G130200 Glycine max HOM05D006033 ORTHO05D007112 6.9e-40 167.9 199 48.2
Sed0010085 Sechium edule HOM05D006033 ORTHO05D007112 6.9e-40 167.9 191 49.7
MELO3C002361.2 Cucumis melo HOM05D006033 ORTHO05D007112 9.1e-40 167.5 191 49.7
Nitab4.5_0004750g0050 Nicotiana tabacum HOM05D006033 ORTHO05D007112 9.1e-40 167.5 196 49.5
Cfa018795 Carpinus fangiana HOM05D006033 ORTHO05D007112 1.2e-39 167.2 207 47.3
RcHm_v2.0_Chr7g0190201 Rosa chinensis HOM05D006033 ORTHO05D007112 1.5e-39 166.8 200 48.5
Haze_07138 Corylus avellana HOM05D006033 ORTHO05D007112 2.0e-39 166.4 207 47.8
SalBow8G5593 Salvia bowleyana HOM05D006033 ORTHO05D007112 2.0e-39 166.4 180 52.8
CAN.G352.14 Capsicum annuum HOM05D006033 ORTHO05D007112 2.6e-39 166.0 206 47.6
Phvul.003G211200 Phaseolus vulgaris HOM05D006033 ORTHO05D007112 3.4e-39 165.6 199 47.7
Actinidia08871 Actinidia chinensis HOM05D006033 ORTHO05D007112 4.5e-39 165.2 202 49.5
C08p51760 Brassica napus HOM05D006033 ORTHO05D007112 4.5e-39 165.2 192 48.4
BolC8t52705H Brassica oleracea HOM05D006033 ORTHO05D007112 4.5e-39 165.2 192 48.4
VMungo1215G0762 Vigna mungo HOM05D006033 ORTHO05D007112 4.5e-39 165.2 199 47.7
Zm00001eb241690 Zea mays HOM05D006033 ORTHO05D007112 4.5e-39 165.2 191 48.7
Ah.02g114900 Amaranthus hybridus HOM05D006033 ORTHO05D007112 5.9e-39 164.9 193 49.2
FvH4_5g08320 Fragaria vesca HOM05D006033 ORTHO05D007112 5.9e-39 164.9 192 49.5
FAN18G2263 Fragaria x ananassa HOM05D006033 ORTHO05D007112 5.9e-39 164.9 192 49.5
Glyma.05G048200 Glycine max HOM05D006033 ORTHO05D007112 5.9e-39 164.9 191 48.7
Actinidia36806 Actinidia chinensis HOM05D006033 ORTHO05D007112 7.7e-39 164.5 200 50.0
ATR0561G152 Amborella trichopoda HOM05D006033 ORTHO05D007112 7.7e-39 164.5 207 44.9
HanXRQChr05g0155041 Helianthus annuus HOM05D006033 ORTHO05D007112 7.7e-39 164.5 196 49.5
EL10Ac5g11413 Beta vulgaris HOM05D006033 ORTHO05D007112 1.0e-38 164.1 191 49.2
A10p04060 Brassica napus HOM05D006033 ORTHO05D007112 1.0e-38 164.1 192 49.0
BolC5t29145H Brassica oleracea HOM05D006033 ORTHO05D007112 1.0e-38 164.1 192 49.5
BraA10t42677Z Brassica rapa HOM05D006033 ORTHO05D007112 1.0e-38 164.1 192 49.0
CDE02G1207 Ceratophyllum demersum HOM05D006033 ORTHO05D007112 1.3e-38 163.7 203 45.8
AUR62029613 Chenopodium quinoa HOM05D006033 ORTHO05D007112 1.3e-38 163.7 191 48.7
FAN08G2192 Fragaria x ananassa HOM05D006033 ORTHO05D007112 1.7e-38 163.3 192 49.0
FAN13G1806 Fragaria x ananassa HOM05D006033 ORTHO05D007112 1.7e-38 163.3 192 49.0
PSO478G4249 Papaver somniferum HOM05D006033 ORTHO05D007112 1.7e-38 163.3 191 48.7
BcaC07g42135 Brassica carinata HOM05D006033 ORTHO05D007112 2.2e-38 162.9 209 46.4
Ca_16046_v3 Cicer arietinum L. HOM05D006033 ORTHO05D007112 2.2e-38 162.9 191 48.7
Hund02441 Selenicereus undatus HOM05D006033 ORTHO05D007112 2.2e-38 162.9 193 49.2
arahy.Tifrunner.gnm1.ann1.YV4Q3G Arachis hypogaea HOM05D006033 ORTHO05D007112 2.9e-38 162.5 191 48.7
FAN04G2747 Fragaria x ananassa HOM05D006033 ORTHO05D007112 2.9e-38 162.5 192 49.0
Lsat_1_v5_gn_5_13720 Lactuca sativa HOM05D006033 ORTHO05D007112 2.9e-38 162.5 202 47.0
SGA_v2.0_scaffold121G33024 Striga asiatica HOM05D006033 ORTHO05D007112 3.8e-38 162.2 181 51.9
THA.LOC104811587 Tarenaya hassleriana HOM05D006033 ORTHO05D007112 3.8e-38 162.2 204 47.5
Sp1g04220 Schrenkiella parvula HOM05D006033 ORTHO05D007112 5.0e-38 161.8 209 46.4
CARHR004850 Cardamine hirsuta HOM05D006033 ORTHO05D007112 6.5e-38 161.4 209 46.4
Lj1g0005507 Lotus japonicus HOM05D006033 ORTHO05D007112 6.5e-38 161.4 199 46.2
C05p03680 Brassica napus HOM05D006033 ORTHO05D007112 1.4e-37 160.2 192 47.9
AUR62034824 Chenopodium quinoa HOM05D006033 ORTHO05D007112 1.4e-37 160.2 216 44.4
HPP92_007005 Vanilla planifolia HOM05D006033 ORTHO05D007112 1.9e-37 159.8 207 45.4
Gohir.D12G192000 Gossypium hirsutum HOM05D006033 ORTHO05D007112 2.5e-37 159.5 210 45.2
MSTRG.1619 Avicennia marina HOM05D006033 ORTHO05D007112 3.2e-37 159.1 195 47.2
Thhalv10007699m.g Eutrema salsugineum HOM05D006033 ORTHO05D007112 3.2e-37 159.1 209 45.5
AL1G15150 Arabidopsis lyrata HOM05D006033 ORTHO05D007112 4.2e-37 158.7 209 45.5
Oeu032516.1 Olea europaea HOM05D006033 ORTHO05D007112 4.2e-37 158.7 211 46.0
TPR.G14208 Trifolium pratense HOM05D006033 ORTHO05D007112 4.2e-37 158.7 199 46.7
AT1G05350 Arabidopsis thaliana HOM05D006033 ORTHO05D007112 5.5e-37 158.3 209 45.5
Medtr2g045230 Medicago truncatula HOM05D006033 ORTHO05D007112 7.2e-37 157.9 191 47.6
Medtr3g099240 Medicago truncatula HOM05D006033 ORTHO05D007112 7.2e-37 157.9 191 47.6
PSO017G2963 Papaver somniferum HOM05D006033 ORTHO05D007112 7.2e-37 157.9 195 47.7
Psat5g051280 Pisum sativum HOM05D006033 ORTHO05D007112 9.4e-37 157.5 191 47.1
A09p67480 Brassica napus HOM05D006033 ORTHO05D007112 1.2e-36 157.1 192 46.9
BraA09t42076Z Brassica rapa HOM05D006033 ORTHO05D007112 1.2e-36 157.1 192 46.9
Lalb_Chr08g0237161 Lupinus albus HOM05D006033 ORTHO05D007112 2.1e-36 156.4 191 46.1
Carub.0001s0469 Capsella rubella HOM05D006033 ORTHO05D007112 2.7e-36 156.0 192 47.4
Gorai.008G206300 Gossypium raimondii HOM05D006033 ORTHO05D007112 3.6e-36 155.6 210 45.2
Migut.E01431 Erythranthe guttata HOM05D006033 ORTHO05D007112 1.0e-35 154.1 203 45.3
vmacro16716 Vaccinium macrocarpon HOM05D006033 ORTHO05D007112 3.9e-35 152.1 194 47.4
TWI39G0081 Tripterygium wilfordii HOM05D006033 ORTHO05D007112 1.4e-32 143.7 208 44.2
unitig_46.g18225 Utricularia gibba HOM05D006033 ORTHO05D007112 3.1e-32 142.5 190 46.8
Pp3c7_23140 Physcomitrium patens HOM05D006033 ORTHO05D007112 2.0e-31 139.8 194 43.3
TAR622G1220 Trochodendron aralioides HOM05D006033 ORTHO05D007112 3.8e-30 135.6 70 90.0
Mapoly0009s0069 Marchantia polymorpha HOM05D006033 ORTHO05D007112 6.5e-30 134.8 194 41.2
SMO364G0767 Selaginella moellendorffii HOM05D006033 ORTHO05D007112 1.9e-29 133.3 213 37.6
TAR027G0002 Trochodendron aralioides HOM05D000369 ORTHO05D000253 3.2e-29 132.5 72 86.1
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 1.2e-28 130.6 82 75.6
Potri.012G097700 Populus trichocarpa HOM05D006033 ORTHO05D007112 8.8e-27 124.4 89 68.5
Aa31LG1G19340 Aethionema arabicum HOM05D006033 ORTHO05D007112 5.9e-23 111.7 169 43.2
Gohir.D07G055650 Gossypium hirsutum HOM05D006033 ORTHO05D007112 3.8e-22 109.0 147 42.9
Dinv11172 Davidia involucrata HOM05D006033 ORTHO05D007112 1.1e-21 107.5 149 43.0
Haze_26394 Corylus avellana HOM05D006033 ORTHO05D007112 3.4e-18 95.9 221 32.1
PRCOL_00005996 Prasinoderma coloniale HOM05D006033 ORTHO05D007112 6.3e-17 91.7 211 31.8
Cre13.g582350 Chlamydomonas reinhardtii HOM05D006033 ORTHO05D007112 1.6e-15 87.0 211 30.8
SEGI_30811 Sequoiadendron giganteum HOM05D006033 ORTHO05D007112 4.5e-15 85.5 76 55.3
CANSAT80G2043 Cannabis sativa HOM05D006033 ORTHO05D007112 2.3e-11 73.2 54 64.8
TAR376G0865 Trochodendron aralioides HOM05D006033 ORTHO05D007112 8.8e-11 71.2 38 86.8
Oeu008767.2 Olea europaea HOM05D006033 ORTHO05D007112 3.4e-10 69.3 94 45.7


User provided reference genes

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