Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 2.6e-158 562.0 284 100.0
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.2e-120 436.0 283 75.3
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.2e-120 436.0 283 75.3
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 1.6e-118 429.9 286 73.8
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 1.6e-115 419.9 283 73.1
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 2.1e-115 419.5 281 74.0
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 6.1e-115 417.9 287 72.5
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 3.0e-114 415.6 284 72.9
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 1.2e-113 413.7 283 68.9
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 2.6e-113 412.5 280 73.9
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 4.4e-113 411.8 285 69.8
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 7.5e-113 411.0 285 72.6
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 9.8e-113 410.6 285 70.5
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 1.7e-112 409.8 283 71.7
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 3.7e-112 408.7 284 69.4
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 6.3e-112 407.9 284 70.4
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 1.4e-111 406.8 282 70.6
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 2.4e-111 406.0 283 69.6
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 5.4e-111 404.8 285 69.1
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 7.0e-111 404.4 268 73.9
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 7.0e-111 404.4 283 72.1
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 9.1e-111 404.1 287 69.7
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 9.1e-111 404.1 283 70.7
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 1.2e-110 403.7 284 68.0
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 2.7e-110 402.5 285 69.5
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 4.5e-110 401.7 283 70.3
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 4.5e-110 401.7 318 64.8
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 1.0e-109 400.6 287 67.6
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 1.0e-109 400.6 283 71.4
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 1.7e-109 399.8 303 67.7
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 2.9e-109 399.1 282 69.1
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 2.9e-109 399.1 259 75.3
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 8.5e-109 397.5 284 69.0
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 1.9e-108 396.4 289 67.5
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 2.5e-108 396.0 289 67.5
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 3.2e-108 395.6 283 68.9
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 7.2e-108 394.4 284 67.6
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 3.0e-106 389.0 267 71.5
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 5.2e-106 388.3 283 68.2
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 6.8e-106 387.9 311 63.0
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 8.8e-106 387.5 286 68.9
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 1.5e-105 386.7 284 66.9
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 2.0e-105 386.3 268 70.5
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 4.4e-105 385.2 283 66.1
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 1.7e-104 383.3 261 69.7
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 1.7e-104 383.3 267 69.7
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 1.7e-104 383.3 280 68.9
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 3.7e-104 382.1 249 72.7
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 4.9e-104 381.7 261 69.3
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 8.3e-104 380.9 286 65.0
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 1.4e-103 380.2 287 66.6
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 3.1e-103 379.0 290 64.1
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 4.1e-103 378.6 283 67.5
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 4.1e-103 378.6 263 70.3
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 9.1e-103 377.5 286 65.4
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 1.2e-102 377.1 286 65.7
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 1.7e-101 373.2 286 64.3
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 2.3e-101 372.9 284 64.8
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 2.3e-101 372.9 260 70.8
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 3.8e-101 372.1 259 71.0
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 6.6e-101 371.3 255 71.4
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 1.1e-100 370.5 259 70.7
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 4.3e-100 368.6 259 69.1
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 4.3e-100 368.6 283 64.0
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 4.7e-99 365.2 283 63.3
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 4.7e-99 365.2 283 66.4
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 6.1e-99 364.8 281 64.4
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 6.1e-99 364.8 285 64.2
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.4e-98 363.6 281 64.1
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 1.8e-98 363.2 285 63.2
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 8.9e-98 360.9 284 65.8
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 5.7e-97 358.2 286 61.5
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 9.8e-97 357.5 278 64.7
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 1.3e-96 357.1 282 64.2
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 3.7e-96 355.5 283 61.8
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 1.8e-95 353.2 283 61.8
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 2.4e-95 352.8 229 75.1
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 3.2e-95 352.4 275 64.7
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 9.2e-95 350.9 283 61.1
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 1.2e-94 350.5 284 62.7
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 5.9e-94 348.2 285 60.7
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 1.7e-93 346.7 252 66.7
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 3.0e-93 345.9 286 59.8
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 6.6e-93 344.7 280 61.4
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 1.9e-92 343.2 284 60.2
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 1.6e-91 340.1 283 60.8
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 2.1e-91 339.7 267 61.0
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 6.2e-91 338.2 306 57.8
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 1.4e-90 337.0 254 67.7
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 2.3e-90 336.3 263 62.0
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 4.4e-89 332.0 259 63.3
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 1.9e-87 326.6 282 56.7
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 9.2e-87 324.3 283 59.0
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 4.3e-84 315.5 285 55.1
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 2.3e-82 309.7 322 53.1
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 2.9e-80 302.8 293 54.6
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 1.1e-76 290.8 353 49.6
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 1.9e-76 290.0 264 53.8
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.6e-75 287.0 208 71.2
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 8.1e-75 284.6 226 62.4
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 1.2e-73 280.8 188 70.7
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 7.6e-73 278.1 225 60.9
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 1.4e-71 273.9 161 80.1
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 9.2e-71 271.2 233 60.1
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 1.3e-69 267.3 224 61.2
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 2.2e-64 250.0 270 50.4
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 9.3e-63 244.6 173 69.9
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 1.3e-61 240.7 279 45.2
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 7.3e-60 235.0 263 47.1
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.3e-59 234.2 163 71.8
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 4.8e-59 232.3 273 44.0
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.0e-53 214.5 146 71.2
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 9.6e-52 208.0 139 70.5
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 6.7e-45 185.3 200 52.0
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 1.2e-33 147.9 144 52.8
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 1.4e-31 141.0 279 33.7
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.6e-30 137.5 80 76.2
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 2.7e-30 136.7 110 60.9
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.3e-29 134.4 162 48.8
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 3.9e-29 132.9 166 50.6
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 1.9e-28 130.6 172 45.3
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 1.7e-24 117.5 93 60.2
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.2e-24 117.1 108 56.5
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 2.9e-24 116.7 205 38.0
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 9.4e-23 111.7 246 34.6
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 2.3e-21 107.1 69 72.5
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-21 107.1 68 73.5
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 6.7e-21 105.5 79 65.8
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.1e-18 96.7 91 52.7
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 9.4e-07 58.5 91 38.5


User provided reference genes

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