Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 5.0e-186 654.4 364 100.0
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 9.6e-97 357.8 379 58.6
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 3.7e-96 355.9 371 59.6
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 1.0e-90 337.8 385 53.5
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 2.4e-87 326.6 391 51.4
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 1.7e-85 320.5 368 56.5
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 1.1e-84 317.8 386 54.4
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 4.6e-83 312.4 386 51.3
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 1.0e-82 311.2 386 52.1
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 6.7e-82 308.5 381 54.3
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 8.7e-82 308.1 369 51.5
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 1.5e-81 307.4 369 51.5
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 5.7e-81 305.4 369 51.5
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 2.8e-80 303.1 385 54.0
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 3.7e-80 302.8 379 52.2
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 6.3e-80 302.0 371 50.7
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 8.2e-80 301.6 380 52.4
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 9.0e-79 298.1 379 52.2
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 1.2e-78 297.7 379 51.2
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 3.4e-78 296.2 385 52.7
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 1.0e-77 294.7 367 52.0
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 2.9e-77 293.1 385 50.4
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 5.0e-77 292.4 382 53.1
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 6.5e-77 292.0 368 52.4
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 8.5e-77 291.6 366 50.0
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 3.2e-76 289.7 383 49.6
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 7.2e-76 288.5 371 50.9
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 1.6e-75 287.3 380 50.3
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.4e-74 284.3 382 50.5
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 7.4e-73 278.5 375 49.6
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 1.7e-72 277.3 376 48.7
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 3.7e-72 276.2 380 51.3
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 4.8e-72 275.8 366 51.4
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 4.8e-72 275.8 368 51.9
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 1.1e-71 274.6 376 51.3
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 1.8e-71 273.9 390 49.2
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 5.3e-71 272.3 378 50.0
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 6.9e-71 271.9 359 52.4
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 7.7e-70 268.5 380 48.9
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 1.7e-69 267.3 396 51.0
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 3.8e-69 266.2 374 47.9
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 6.5e-69 265.4 366 49.5
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 1.1e-68 264.6 373 52.8
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.4e-68 264.2 362 50.6
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.4e-68 264.2 362 51.1
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 2.5e-68 263.5 368 47.8
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.2e-68 263.1 399 44.9
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 4.2e-68 262.7 397 46.9
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 5.5e-68 262.3 376 47.1
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 1.0e-66 258.1 372 48.4
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 2.3e-66 256.9 379 47.0
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 1.1e-65 254.6 371 49.9
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 1.5e-65 254.2 370 48.1
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 3.7e-64 249.6 320 50.3
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 1.1e-63 248.1 399 46.4
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 1.4e-63 247.7 429 43.6
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 2.4e-63 246.9 376 48.4
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 1.1e-60 238.0 369 47.2
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 9.4e-60 235.0 362 46.1
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 1.2e-59 234.6 370 45.9
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 1.2e-59 234.6 380 43.2
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 1.6e-59 234.2 368 47.6
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 2.1e-59 233.8 362 45.9
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 8.0e-59 231.9 362 45.6
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 2.8e-56 223.4 461 40.6
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 1.1e-55 221.5 300 49.7
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 2.0e-54 217.2 320 45.3
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 1.0e-53 214.9 370 41.6
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 3.8e-53 213.0 305 46.6
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 6.8e-50 202.2 435 39.3
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 4.1e-47 193.0 377 42.4
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 5.9e-46 189.1 357 40.6
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 1.5e-44 184.5 373 41.6
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 1.9e-44 184.1 381 39.9
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 5.5e-44 182.6 414 38.2
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 1.2e-43 181.4 417 37.9
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 1.2e-43 181.4 375 39.5
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 2.1e-43 180.6 373 40.5
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 1.2e-41 174.9 379 41.7
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 1.2e-41 174.9 379 41.7
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 5.7e-41 172.6 366 39.1
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 2.8e-40 170.2 379 41.2
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 3.7e-40 169.9 386 40.7
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 3.7e-40 169.9 386 40.7
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 2.4e-39 167.2 294 42.5
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 5.4e-39 166.0 378 39.2
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 2.0e-38 164.1 384 38.8
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 1.9e-36 157.5 380 36.3
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 3.3e-36 156.8 387 36.4
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 7.2e-36 155.6 297 40.4
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 3.6e-35 153.3 367 35.7
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 6.8e-34 149.1 161 57.8
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 3.4e-33 146.7 370 36.2
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 3.2e-31 140.2 391 33.8
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 1.6e-30 137.9 304 38.2
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 8.6e-29 132.1 367 34.3
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 2.5e-28 130.6 308 38.6
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 2.8e-27 127.1 210 48.6
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 2.8e-27 127.1 371 34.5
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 7.5e-25 119.0 383 32.1
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 1.3e-24 118.2 403 31.8
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 4.9e-24 116.3 240 39.2
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 4.1e-23 113.2 367 33.2
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 1.5e-20 104.8 384 31.0
Cpa.g.sc939.1 Carica papaya HOM05D006327 ORTHO05D007952 2.2e-16 90.9 66 77.3
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.7e-16 90.1 91 53.8
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 4.9e-16 89.7 91 52.7
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.4e-16 89.4 91 53.8
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.1e-15 88.6 128 44.5
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.4e-15 86.3 91 51.6
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.4e-15 86.3 91 51.6
ATR0665G137 Amborella trichopoda HOM05D006327 ORTHO05D007952 9.2e-15 85.5 127 40.9
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 2.1e-14 84.3 75 57.3
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.1e-14 84.3 91 51.6
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.1e-14 84.3 55 74.5
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.0e-13 82.0 114 50.0
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 8.6e-13 79.0 47 76.6
MSTRG.11411 Avicennia marina HOM05D006327 ORTHO05D007952 2.5e-12 77.4 96 44.8
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 9.9e-09 65.5 55 56.4
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 9.9e-09 65.5 253 26.1
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 5.4e-07 59.7 171 32.2
Migut.B01064 Erythranthe guttata HOM05D006327 ORTHO05D007952 2.1e-06 57.8 71 45.1
SMO361G0449 Selaginella moellendorffii HOM05D063101 ORTHO05D007952 2.1e-06 57.8 218 28.0


User provided reference genes

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