Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 4.6e-157 557.8 264 100.0
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 3.7e-122 441.8 264 76.9
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 8.2e-122 440.7 264 75.8
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 4.1e-121 438.3 264 75.8
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 1.7e-119 433.0 262 74.4
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 2.9e-119 432.2 264 74.6
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 1.4e-118 429.9 264 75.4
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 5.5e-118 427.9 264 73.5
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 9.4e-118 427.2 264 73.9
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 9.4e-118 427.2 257 77.4
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 2.7e-117 425.6 262 76.0
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 3.6e-117 425.2 264 75.4
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 7.9e-117 424.1 266 74.8
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 7.9e-117 424.1 264 73.9
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 2.3e-116 422.5 264 73.5
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.3e-116 422.5 264 74.2
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 3.9e-116 421.8 264 74.2
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 3.3e-115 418.7 264 74.2
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 5.7e-115 417.9 264 73.9
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 3.7e-114 415.2 264 73.9
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 3.7e-114 415.2 264 73.5
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 2.0e-112 409.5 264 75.0
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 4.5e-112 408.3 265 73.6
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 1.0e-111 407.1 265 70.9
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 1.3e-111 406.8 270 73.0
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 1.7e-111 406.4 264 72.7
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 2.2e-111 406.0 220 84.5
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.2e-109 400.2 252 75.4
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 1.6e-109 399.8 264 69.3
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 6.1e-109 397.9 264 70.5
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 1.0e-108 397.1 262 69.8
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 1.4e-108 396.7 264 70.5
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 3.9e-108 395.2 263 71.1
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 6.7e-108 394.4 265 68.7
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 3.3e-107 392.1 264 69.7
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 5.7e-107 391.3 256 71.5
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 1.3e-106 390.2 268 69.0
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 2.8e-106 389.0 253 69.6
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 2.8e-106 389.0 264 68.6
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 4.8e-106 388.3 255 71.4
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 1.1e-105 387.1 265 68.7
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 4.1e-105 385.2 264 69.7
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 4.1e-105 385.2 264 69.7
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 7.0e-105 384.4 262 70.6
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 4.5e-104 381.7 307 60.6
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 1.7e-103 379.8 265 69.8
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 1.7e-103 379.8 267 68.2
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 2.9e-103 379.0 253 70.4
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 6.5e-103 377.9 265 69.1
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 8.5e-103 377.5 262 67.9
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 8.5e-103 377.5 263 68.4
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 8.5e-103 377.5 254 69.3
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 5.5e-102 374.8 267 65.9
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.0e-100 368.6 254 66.5
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 5.2e-100 368.2 254 66.1
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.2e-100 368.2 254 66.1
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.4e-99 365.2 252 65.9
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 4.4e-99 365.2 254 67.3
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 4.4e-99 365.2 264 66.7
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 2.0e-96 356.3 265 64.5
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 5.9e-96 354.8 265 64.2
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 7.7e-96 354.4 264 66.3
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 1.1e-94 350.5 225 72.9
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 1.6e-93 346.7 219 73.1
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.1e-93 346.3 246 64.6
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 3.0e-92 342.4 254 65.7
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 4.0e-92 342.0 268 63.4
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 5.2e-92 341.7 266 63.2
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 2.0e-88 329.7 220 69.1
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 1.3e-87 327.0 264 61.7
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 8.3e-82 307.8 265 58.9
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 3.5e-80 302.4 224 62.5
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 2.9e-79 299.3 228 62.3
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 4.9e-74 282.0 178 74.2
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 4.1e-73 278.9 179 71.5
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 2.0e-64 250.0 173 69.4
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 2.0e-64 250.0 173 69.4
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 2.7e-56 223.0 181 61.3
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 2.7e-56 223.0 159 65.4
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 1.0e-55 221.1 179 56.4
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 1.1e-54 217.6 132 75.8
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 7.3e-54 214.9 284 44.0
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 2.8e-53 213.0 130 76.9
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 1.9e-49 200.3 203 52.7
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 5.6e-46 188.7 131 67.9
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 2.9e-42 176.4 144 56.9
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 2.6e-35 153.3 106 67.9
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.7e-34 150.6 110 61.8
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 1.4e-33 147.5 106 64.2
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 1.5e-30 137.5 315 31.1
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.3e-30 136.0 315 31.1
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 2.0e-27 127.1 101 62.4
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 5.1e-23 112.5 92 58.7
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 5.8e-19 99.0 113 46.9
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 5.8e-19 99.0 58 70.7
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.3e-18 97.8 58 69.0
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 9.3e-17 91.7 74 59.5


User provided reference genes

Program Settings