Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 7.3e-110 400.6 206 100.0
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.0e-58 230.7 187 65.2
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 1.0e-58 230.7 193 64.2
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 1.7e-58 229.9 188 62.8
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 3.8e-58 228.8 181 64.1
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 1.8e-55 219.9 186 62.9
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 2.0e-54 216.5 166 66.9
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 3.3e-54 215.7 137 77.4
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 2.8e-53 212.6 183 57.9
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 3.7e-53 212.2 184 62.0
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 3.7e-53 212.2 147 68.0
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 6.3e-53 211.5 182 57.7
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 8.2e-53 211.1 175 61.1
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 1.4e-52 210.3 179 61.5
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 2.6e-51 206.1 181 58.0
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 3.5e-51 205.7 172 61.6
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 5.9e-51 204.9 171 59.6
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 5.9e-51 204.9 181 58.6
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 7.7e-51 204.5 197 56.3
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 7.7e-51 204.5 182 58.8
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.0e-50 204.1 167 60.5
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 1.7e-50 203.4 173 60.1
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 3.8e-50 202.2 180 58.3
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 5.0e-50 201.8 197 55.8
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 8.5e-50 201.1 167 58.7
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 8.5e-50 201.1 178 57.3
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 1.1e-49 200.7 175 56.6
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 2.5e-49 199.5 175 56.0
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 2.5e-49 199.5 177 56.5
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 4.2e-49 198.7 171 57.9
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 5.5e-49 198.4 183 58.5
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 5.5e-49 198.4 180 58.9
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 1.2e-48 197.2 172 60.5
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 1.2e-48 197.2 171 59.1
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 1.2e-48 197.2 187 56.7
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 1.6e-48 196.8 166 60.2
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 2.1e-48 196.4 173 58.4
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.6e-48 195.7 139 66.9
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 4.7e-48 195.3 173 60.1
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 4.7e-48 195.3 173 60.1
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 4.7e-48 195.3 179 55.3
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 8.0e-48 194.5 139 66.2
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 1.4e-47 193.7 173 59.5
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 2.3e-47 193.0 184 53.8
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 3.0e-47 192.6 139 69.1
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 4.0e-47 192.2 178 55.1
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 1.2e-46 190.7 146 65.8
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 2.6e-46 189.5 181 56.4
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 4.4e-46 188.7 178 56.2
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 9.7e-46 187.6 179 56.4
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 1.3e-45 187.2 166 59.6
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 1.7e-45 186.8 163 59.5
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 2.2e-45 186.4 145 64.1
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 2.2e-45 186.4 151 62.9
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 6.3e-45 184.9 143 62.2
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 1.1e-44 184.1 143 62.2
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 1.1e-44 184.1 148 65.5
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 1.4e-44 183.7 182 53.3
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 2.4e-44 183.0 179 52.5
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 2.4e-44 183.0 146 61.6
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 2.0e-43 179.9 178 51.7
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 5.9e-43 178.3 143 60.1
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 5.9e-43 178.3 171 54.4
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 1.0e-42 177.6 176 52.8
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 1.7e-42 176.8 140 61.4
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 1.7e-42 176.8 140 61.4
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 2.2e-42 176.4 172 52.9
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 2.2e-42 176.4 173 52.0
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 5.0e-42 175.3 170 53.5
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 6.5e-42 174.9 157 57.3
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 6.5e-42 174.9 182 48.4
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 1.5e-41 173.7 128 63.3
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 1.9e-41 173.3 157 59.2
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 2.5e-41 172.9 170 54.1
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 3.2e-41 172.6 174 52.9
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 4.2e-41 172.2 172 52.9
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 7.2e-41 171.4 181 50.8
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 2.3e-39 166.4 112 73.2
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.7e-37 160.2 125 60.0
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 7.0e-36 154.8 115 63.5
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 9.1e-36 154.5 125 62.4
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 1.6e-35 153.7 143 53.1
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 1.7e-34 150.2 127 60.6
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 3.3e-33 146.0 111 66.7
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 2.8e-32 142.9 110 63.6
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 4.7e-32 142.1 113 63.7
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 1.4e-31 140.6 110 62.7
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 1.3e-29 134.0 138 52.2
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.0e-26 124.4 86 70.9
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 1.7e-26 123.6 145 42.8
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 4.3e-25 119.0 105 56.2
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 5.6e-25 118.6 120 52.5
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 5.8e-22 108.6 125 48.0
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 3.7e-21 105.9 92 55.4
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 1.1e-20 104.4 108 52.8
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 1.6e-16 90.5 74 59.5
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 2.1e-16 90.1 140 37.9
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 8.0e-16 88.2 89 52.8
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 1.1e-15 87.8 127 39.4
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 7.5e-14 81.6 110 44.5
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 1.9e-12 77.0 135 39.3


User provided reference genes

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