Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 4.7e-135 484.6 251 100.0
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 6.7e-81 304.7 238 67.6
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 1.7e-76 290.0 239 63.6
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 3.2e-75 285.8 240 62.5
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 2.4e-70 269.6 238 58.4
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 2.9e-68 262.7 237 59.5
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 1.6e-66 256.9 238 58.0
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 3.5e-66 255.8 237 56.5
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 3.5e-66 255.8 237 58.2
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 7.9e-66 254.6 237 57.8
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 1.8e-65 253.4 237 57.0
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 1.9e-64 250.0 237 54.9
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 2.5e-64 249.6 238 56.7
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 9.7e-64 247.7 237 55.7
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 4.8e-63 245.4 238 53.4
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 6.3e-63 245.0 237 54.4
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 8.2e-63 244.6 237 54.9
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 1.8e-62 243.4 237 54.4
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 3.1e-62 242.7 237 55.7
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 4.1e-62 242.3 237 52.3
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 1.2e-61 240.7 239 57.3
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 2.0e-61 240.0 237 51.5
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 3.4e-61 239.2 237 51.9
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 3.4e-61 239.2 238 53.8
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 5.9e-61 238.4 241 52.7
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 5.9e-61 238.4 237 51.5
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 1.3e-60 237.3 237 51.5
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 5.0e-60 235.3 234 53.8
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 1.1e-59 234.2 237 53.2
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.4e-59 233.8 238 52.5
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 5.5e-59 231.9 190 62.6
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 7.2e-59 231.5 178 65.2
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 3.6e-58 229.2 236 51.3
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 6.1e-58 228.4 244 51.2
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 1.0e-57 227.6 240 52.5
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 1.8e-57 226.9 236 48.7
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 1.8e-57 226.9 238 51.7
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 2.3e-57 226.5 238 51.7
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 1.1e-56 224.2 241 51.5
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 5.7e-56 221.9 238 51.3
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 7.4e-56 221.5 238 52.5
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 9.7e-56 221.1 246 51.2
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 2.8e-55 219.5 264 47.0
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 4.8e-55 218.8 238 51.7
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 1.1e-54 217.6 241 49.0
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 1.2e-53 214.2 240 51.2
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 1.5e-53 213.8 237 49.4
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 5.9e-53 211.8 243 49.8
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.0e-52 211.1 237 49.8
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 1.3e-52 210.7 238 49.2
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.7e-52 210.3 238 48.7
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 2.9e-52 209.5 244 48.8
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 2.9e-52 209.5 241 49.0
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 3.8e-52 209.1 238 48.3
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 5.0e-52 208.8 238 47.5
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 6.5e-52 208.4 238 48.7
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 8.5e-52 208.0 238 47.1
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 1.1e-51 207.6 235 49.4
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 1.1e-51 207.6 238 49.2
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 1.1e-51 207.6 241 46.9
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 2.5e-51 206.5 255 51.8
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 3.2e-51 206.1 241 46.9
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 1.2e-50 204.1 243 49.0
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 1.6e-50 203.8 244 49.2
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 3.6e-50 202.6 238 48.3
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 7.9e-50 201.4 238 47.1
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 7.9e-50 201.4 248 49.2
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 1.0e-49 201.1 238 45.0
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 3.9e-49 199.1 239 46.4
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 1.5e-48 197.2 238 47.1
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 1.5e-48 197.2 244 47.1
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 2.0e-48 196.8 210 49.0
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 4.4e-48 195.7 241 48.5
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 4.8e-47 192.2 237 46.0
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 6.3e-47 191.8 241 45.2
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 1.4e-46 190.7 238 45.4
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 1.4e-46 190.7 209 48.3
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 2.4e-46 189.9 236 45.8
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 4.1e-46 189.1 260 44.2
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 1.6e-45 187.2 245 47.3
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 2.0e-45 186.8 255 44.7
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 2.6e-45 186.4 209 47.4
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 5.9e-45 185.3 236 45.3
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 9.4e-43 177.9 215 45.1
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 8.0e-42 174.9 241 44.4
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 1.4e-41 174.1 241 44.4
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 4.0e-41 172.6 241 44.4
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 5.2e-41 172.2 179 49.2
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 5.7e-40 168.7 224 45.5
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 9.7e-40 167.9 237 42.6
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 6.3e-39 165.2 248 42.7
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.4e-38 164.1 238 43.7
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 1.3e-36 157.5 239 41.4
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 1.7e-36 157.1 222 44.6
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 6.5e-36 155.2 174 50.6
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 7.2e-35 151.8 223 42.6
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 3.6e-34 149.4 183 45.4
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 1.2e-32 144.4 212 39.6
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 2.0e-32 143.7 214 38.3
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 2.2e-31 140.2 239 41.4
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 2.8e-31 139.8 178 47.8
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 1.4e-30 137.5 137 52.6
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 2.7e-29 133.3 244 39.8
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 1.5e-24 117.5 231 32.5
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 3.4e-24 116.3 76 72.4
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 6.3e-23 112.1 202 34.7
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 5.4e-22 109.0 133 49.6
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 4.5e-21 105.9 152 44.7
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 5.9e-21 105.5 148 45.3
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 8.0e-18 95.1 60 76.7
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 1.2e-16 91.3 202 32.2
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 5.7e-16 89.0 153 39.9
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 6.4e-15 85.5 59 66.1
Mapoly0051s0086 Marchantia polymorpha HOM05D006386 ORTHO05D007575 3.0e-12 76.6 213 30.0
Rhsim08G0139600 Rhododendron simsii HOM05D006386 ORTHO05D007575 3.1e-09 66.6 48 62.5
Aqoxy6G02623 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 5.2e-09 65.9 107 40.2
COL.COLO4_24165 Corchorus olitorius HOM05D006386 ORTHO05D007575 7.5e-08 62.0 69 50.7
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 2.9e-07 60.1 40 62.5
Gorai.007G248400 Gossypium raimondii HOM05D006386 ORTHO05D007575 1.4e-06 57.8 35 65.7


User provided reference genes

Program Settings