Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 7.4e-245 850.1 435 100.0
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 6.8e-174 614.4 444 73.0
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 7.5e-173 610.9 441 73.0
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.0e-169 600.5 444 72.3
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 6.6e-161 571.2 436 69.0
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 5.8e-157 558.1 424 69.3
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 7.1e-155 551.2 414 69.8
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 1.6e-154 550.1 446 67.7
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.3e-153 547.0 407 70.0
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.7e-153 546.6 407 69.8
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 7.3e-152 541.2 412 68.2
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.6e-151 540.0 422 65.6
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 2.4e-150 536.2 402 69.7
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 1.2e-149 533.9 412 67.0
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 2.6e-149 532.7 443 64.6
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 5.8e-149 531.6 406 67.0
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 2.2e-148 529.6 391 70.3
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 7.1e-147 524.6 429 64.8
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 7.1e-147 524.6 413 68.3
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 2.1e-146 523.1 425 64.9
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 1.3e-145 520.4 454 62.1
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 3.9e-145 518.8 448 64.1
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.5e-144 516.9 433 62.4
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 2.5e-144 516.2 398 66.8
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 2.5e-144 516.2 445 64.7
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 2.8e-143 512.7 450 63.3
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.8e-143 511.9 410 67.1
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 1.4e-142 510.4 442 62.7
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 1.8e-142 510.0 435 64.6
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.4e-142 509.6 434 64.5
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.5e-141 506.9 432 64.8
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 3.4e-141 505.8 410 66.1
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 4.5e-141 505.4 401 64.6
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 6.4e-140 501.5 419 62.8
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 1.1e-139 500.7 436 64.4
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.9e-139 500.0 444 61.7
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.9e-139 500.0 413 65.4
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 7.1e-139 498.0 438 60.7
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 3.5e-138 495.7 442 62.4
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 1.8e-137 493.4 429 61.3
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 5.1e-137 491.9 411 63.5
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 6.7e-137 491.5 455 60.0
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 8.7e-137 491.1 414 63.8
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.1e-136 490.7 416 62.7
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 1.5e-136 490.3 413 63.2
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 2.5e-136 489.6 423 62.4
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 5.6e-136 488.4 443 60.3
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 9.6e-136 487.6 447 60.6
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 8.1e-135 484.6 434 61.5
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.4e-134 483.8 375 67.5
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.3e-132 477.2 416 59.6
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 6.4e-132 474.9 392 62.5
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 1.1e-131 474.2 382 64.7
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 4.2e-131 472.2 435 57.2
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 5.5e-131 471.9 433 58.4
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 6.7e-129 464.9 345 68.1
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 9.6e-128 461.1 400 63.2
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 5.3e-126 455.3 410 60.5
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 5.8e-125 451.8 440 57.7
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.9e-123 446.8 410 55.4
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 3.9e-121 439.1 441 54.2
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 1.9e-120 436.8 375 60.8
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 6.9e-118 428.3 398 56.0
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 1.2e-117 427.6 428 54.4
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 3.4e-117 426.0 442 53.2
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 4.5e-117 425.6 434 53.5
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 4.5e-117 425.6 434 53.5
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.3e-116 424.1 442 52.7
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 3.8e-116 422.5 407 54.8
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 8.5e-116 421.4 409 55.5
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 8.5e-116 421.4 401 55.6
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 5.5e-115 418.7 401 54.6
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 2.1e-114 416.8 427 52.5
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 7.9e-114 414.8 344 63.1
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 5.1e-113 412.1 429 53.1
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 3.6e-106 389.4 363 59.0
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 7.9e-106 388.3 334 59.6
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.1e-102 377.9 378 51.6
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 7.0e-102 375.2 420 48.3
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 4.5e-101 372.5 358 55.3
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 4.5e-101 372.5 311 65.6
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 4.4e-96 355.9 321 57.6
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 2.0e-93 347.1 311 61.4
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 8.8e-89 331.6 383 46.5
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.2e-87 327.0 374 48.4
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 3.0e-81 306.6 382 42.9
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 8.8e-81 305.1 410 44.1
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.3e-79 301.2 346 46.5
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 3.4e-72 276.6 304 51.3
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 8.0e-66 255.4 304 46.1
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 6.0e-61 239.2 253 54.2
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 3.0e-60 236.9 390 37.7
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 7.1e-54 215.7 388 36.9
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 4.6e-53 213.0 192 56.8
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 5.6e-51 206.1 592 28.0
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 3.9e-44 183.3 247 40.1
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 7.6e-40 169.1 116 71.6
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 2.7e-37 160.6 133 60.9
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 6.0e-37 159.5 192 48.4
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 4.6e-29 133.3 132 58.3
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 1.3e-23 115.2 362 27.3
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 1.7e-23 114.8 99 62.6
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.1e-21 107.8 83 67.5
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.3e-20 105.1 78 65.4
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 2.3e-20 104.4 77 66.2
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 5.1e-20 103.2 84 63.1
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 5.3e-17 93.2 79 58.2
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 1.0e-12 79.0 96 45.8
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.0e-12 79.0 54 74.1
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.5e-11 74.3 64 62.5
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 2.4e-09 67.8 61 55.7
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 3.4e-08 63.9 37 81.1
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 1.4e-06 58.5 37 75.7


User provided reference genes

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