Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 3.6e-70 268.1 130 100.0
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 7.8e-41 170.6 247 41.7
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 3.9e-40 168.3 249 40.2
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 3.9e-40 168.3 248 41.1
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 2.5e-39 165.6 247 40.1
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 3.3e-39 165.2 247 40.1
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 1.4e-37 159.8 248 38.3
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 4.0e-37 158.3 246 39.4
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 6.8e-37 157.5 247 38.1
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 8.9e-37 157.1 255 37.3
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.5e-36 156.4 248 37.5
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 2.0e-36 156.0 247 38.5
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 3.4e-36 155.2 247 38.1
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 3.4e-36 155.2 247 38.5
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 5.8e-36 154.5 245 37.6
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 7.5e-36 154.1 245 37.1
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 9.8e-36 153.7 246 37.4
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.3e-35 153.3 246 37.4
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.7e-35 152.9 248 36.7
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 2.9e-35 152.1 245 37.6
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 4.9e-35 151.4 246 37.8
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 4.9e-35 151.4 248 37.1
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 6.4e-35 151.0 247 38.5
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 6.4e-35 151.0 246 37.0
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 6.4e-35 151.0 247 37.2
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 6.4e-35 151.0 246 39.0
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.9e-34 149.4 247 37.2
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.4e-34 149.1 247 38.5
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 2.4e-34 149.1 247 36.8
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 7.0e-34 147.5 247 36.8
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 9.2e-34 147.1 247 36.0
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.2e-33 146.7 247 36.4
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 1.2e-33 146.7 247 36.0
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 2.1e-33 146.0 246 37.4
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 6.0e-33 144.4 233 38.6
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 7.8e-33 144.1 247 35.6
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.7e-32 142.9 247 36.0
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.7e-32 142.9 251 35.5
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 1.7e-32 142.9 247 35.2
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 3.9e-32 141.7 247 36.8
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 3.9e-32 141.7 247 35.6
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 3.9e-32 141.7 247 35.6
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 3.9e-32 141.7 247 35.6
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 3.9e-32 141.7 247 34.8
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 6.6e-32 141.0 246 36.6
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 2.5e-31 139.0 247 36.0
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 3.3e-31 138.7 247 35.2
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 4.3e-31 138.3 247 36.0
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 5.6e-31 137.9 249 34.9
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 5.6e-31 137.9 224 38.4
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 5.6e-31 137.9 224 38.4
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 9.5e-31 137.1 250 36.0
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.2e-30 136.7 247 35.6
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 4.7e-30 134.8 247 36.0
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 4.7e-30 134.8 79 78.5
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 8.1e-30 134.0 248 34.3
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 1.1e-29 133.7 78 74.4
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 1.1e-29 133.7 81 75.3
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 1.8e-29 132.9 79 74.7
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.8e-29 132.9 79 77.2
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 3.1e-29 132.1 81 75.3
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 5.2e-29 131.3 79 74.7
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 5.2e-29 131.3 202 38.6
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.9e-29 130.6 235 34.9
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 8.9e-29 130.6 233 35.6
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.2e-28 130.2 245 34.7
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.5e-28 129.8 77 76.6
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 2.0e-28 129.4 79 72.2
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.0e-28 129.4 234 34.6
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 2.0e-28 129.4 79 73.4
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.6e-28 129.0 235 34.5
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 3.4e-28 128.6 74 73.0
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 5.8e-28 127.9 80 68.8
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 7.5e-28 127.5 79 72.2
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 1.7e-27 126.3 244 34.4
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 4.9e-27 124.8 232 33.6
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.4e-26 123.2 152 48.7
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 1.9e-26 122.9 247 34.4
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.0e-24 117.1 233 32.6
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.7e-24 116.3 150 44.7
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 3.0e-24 115.5 233 33.5
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 3.0e-24 115.5 70 68.6
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.5e-23 113.2 67 73.1
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 5.6e-23 111.3 78 59.0
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.6e-22 109.8 75 68.0
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 1.1e-21 107.1 231 34.2
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 1.1e-21 107.1 65 73.8
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 1.4e-21 106.7 208 34.6
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 3.1e-21 105.5 78 62.8
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.3e-19 100.1 65 63.1
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 1.7e-19 99.8 78 59.0
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.1e-18 97.1 200 33.5
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 1.4e-18 96.7 214 32.7
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.4e-18 95.9 64 70.3
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 5.4e-18 94.7 78 56.4
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.1e-17 92.8 76 53.9
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 2.7e-17 92.4 252 31.0
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 6.0e-17 91.3 76 56.6
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 8.7e-16 87.4 57 71.9
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.5e-15 86.7 65 60.0
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 7.3e-15 84.3 57 66.7
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 4.8e-14 81.6 218 29.4
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 1.2e-12 77.0 57 63.2
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 2.6e-12 75.9 57 61.4
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.7e-11 73.2 195 28.7
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 2.9e-11 72.4 79 51.9
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 3.8e-11 72.0 57 63.2
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 1.6e-09 66.6 40 67.5
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 7.8e-09 64.3 54 57.4
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 1.7e-08 63.2 44 61.4


User provided reference genes

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