Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 2.5e-93 345.5 181 100.0
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 5.5e-53 211.5 181 65.7
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 7.2e-53 211.1 177 68.4
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 9.4e-53 210.7 196 65.3
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 1.2e-52 210.3 181 64.1
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 3.6e-52 208.8 175 68.0
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 8.0e-52 207.6 181 66.9
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 1.8e-51 206.5 180 63.3
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 6.8e-51 204.5 179 62.0
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 3.4e-50 202.2 117 89.7
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 4.4e-50 201.8 179 62.6
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 4.4e-50 201.8 181 63.0
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 2.8e-49 199.1 116 88.8
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 3.7e-49 198.7 173 64.7
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 3.7e-49 198.7 116 87.1
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 8.3e-49 197.6 117 87.2
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 1.8e-48 196.4 116 87.1
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 3.1e-48 195.7 182 62.1
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 5.4e-48 194.9 181 62.4
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 5.4e-48 194.9 116 86.2
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 7.0e-48 194.5 181 59.7
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 9.1e-48 194.1 116 85.3
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 1.6e-47 193.4 113 89.4
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 1.6e-47 193.4 113 89.4
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 2.7e-47 192.6 181 63.5
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.7e-47 192.6 116 84.5
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.7e-47 192.6 116 84.5
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 2.7e-47 192.6 116 84.5
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 3.5e-47 192.2 181 63.0
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 3.5e-47 192.2 181 63.0
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 3.5e-47 192.2 181 63.0
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 5.9e-47 191.4 112 86.6
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 7.7e-47 191.0 175 63.4
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 7.7e-47 191.0 116 84.5
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 7.7e-47 191.0 114 84.2
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 7.7e-47 191.0 181 61.9
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 1.0e-46 190.7 112 88.4
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 2.3e-46 189.5 180 61.7
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 2.3e-46 189.5 114 83.3
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 3.8e-46 188.7 113 85.0
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 3.8e-46 188.7 115 83.5
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 6.6e-46 188.0 116 83.6
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 8.6e-46 187.6 166 65.1
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 8.6e-46 187.6 168 64.3
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.1e-45 187.2 176 64.2
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.9e-45 186.4 176 63.1
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.9e-45 186.4 116 81.9
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 1.9e-45 186.4 106 89.6
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 1.9e-45 186.4 108 87.0
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 1.9e-45 186.4 112 81.2
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 1.9e-45 186.4 115 84.3
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.5e-45 186.0 116 81.9
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 2.5e-45 186.0 106 88.7
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 2.5e-45 186.0 176 63.6
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 2.5e-45 186.0 112 85.7
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 3.3e-45 185.7 173 63.6
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.3e-45 185.7 116 81.9
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 4.2e-45 185.3 115 83.5
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 4.2e-45 185.3 171 59.6
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 4.2e-45 185.3 171 61.4
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 5.5e-45 184.9 113 85.0
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 9.5e-45 184.1 114 79.8
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 9.5e-45 184.1 109 84.4
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 9.5e-45 184.1 131 75.6
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 1.6e-44 183.3 115 79.1
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 2.1e-44 183.0 178 57.9
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 2.1e-44 183.0 107 85.0
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 3.6e-44 182.2 107 86.0
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 4.7e-44 181.8 177 58.8
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 1.0e-43 180.6 108 83.3
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 1.4e-43 180.3 117 77.8
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 1.8e-43 179.9 177 58.2
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 3.0e-43 179.1 108 82.4
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 4.0e-43 178.7 111 80.2
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 5.2e-43 178.3 108 83.3
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 8.9e-43 177.6 109 80.7
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 1.2e-42 177.2 117 76.9
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 1.2e-42 177.2 109 83.5
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 1.5e-42 176.8 108 81.5
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 2.0e-42 176.4 109 79.8
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 2.0e-42 176.4 109 79.8
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 2.0e-42 176.4 109 79.8
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 2.0e-42 176.4 109 79.8
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 2.0e-42 176.4 109 79.8
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 2.0e-42 176.4 109 79.8
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 3.4e-42 175.6 107 83.2
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 2.2e-41 172.9 109 78.0
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 2.2e-41 172.9 106 81.1
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 2.8e-41 172.6 106 79.2
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 8.3e-41 171.0 106 80.2
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 1.4e-40 170.2 106 79.2
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 1.4e-40 170.2 106 79.2
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 2.4e-40 169.5 109 76.1
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 3.1e-40 169.1 113 72.6
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 5.4e-40 168.3 109 78.9
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 1.2e-39 167.2 109 74.3
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 1.6e-39 166.8 109 71.6
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 2.7e-39 166.0 98 81.6
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 5.6e-37 158.3 114 65.8
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 5.6e-37 158.3 114 65.8
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 9.5e-37 157.5 114 66.7
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 6.8e-35 151.4 109 69.7
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 1.3e-33 147.1 85 89.4
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 1.7e-33 146.7 91 84.6
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.9e-33 146.0 116 70.7
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 1.6e-31 140.2 81 82.7
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 3.5e-31 139.0 84 84.5
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 1.3e-30 137.1 105 64.8
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 2.1e-28 129.8 86 74.4
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 2.1e-28 129.8 86 74.4
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 1.7e-25 120.2 107 55.1
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 2.8e-20 102.8 115 55.7
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 1.1e-19 100.9 53 94.3
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 4.4e-18 95.5 79 58.2
PRCOL_00000692 Prasinoderma coloniale HOM05D007021 ORTHO05D008916 2.9e-17 92.8 104 47.1


User provided reference genes

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