Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A400T56 Lonicera japonica HOM05D000267 ORTHO05D009944 5.4e-43 177.2 85 100.0
CSS0022193 Camellia sinensis var. sinensis HOM05D000267 ORTHO05D009944 3.1e-30 134.8 73 89.0
Prupe.8G168300 Prunus persica HOM05D000267 ORTHO05D009944 3.4e-29 131.3 74 85.1
Actinidia18043 Actinidia chinensis HOM05D000267 ORTHO05D002764 4.5e-29 131.0 74 81.1
Hma1.2p1_0163F.1_g072670 Hydrangea macrophylla HOM05D000267 ORTHO05D009944 2.2e-28 128.6 74 87.8
vmacro02289 Vaccinium macrocarpon HOM05D000267 ORTHO05D009944 2.2e-28 128.6 74 85.1
MD05G1124600 Malus domestica HOM05D000267 ORTHO05D009944 3.8e-28 127.9 74 82.4
Haze_02110 Corylus avellana HOM05D000267 ORTHO05D009944 8.4e-28 126.7 74 82.4
QL11p051524 Quercus lobata HOM05D000267 ORTHO05D009944 8.4e-28 126.7 74 82.4
COL.COLO4_17372 Corchorus olitorius HOM05D000267 ORTHO05D009944 2.4e-27 125.2 74 78.4
Duzib132G0985 Durio zibethinus HOM05D000267 ORTHO05D009944 5.5e-27 124.0 74 75.7
Thecc.02G056000 Theobroma cacao HOM05D000267 ORTHO05D009944 5.5e-27 124.0 74 79.7
Rhsim11G0193400 Rhododendron simsii HOM05D000267 ORTHO05D009944 7.1e-27 123.6 74 81.1
Cfa005283 Carpinus fangiana HOM05D000267 ORTHO05D002764 9.3e-27 123.2 73 80.8
Dinv41920 Davidia involucrata HOM05D000267 ORTHO05D002764 9.3e-27 123.2 74 83.8
CANSAT25G1222 Cannabis sativa HOM05D000267 ORTHO05D009944 2.1e-26 122.1 74 79.7
Cc09_g10270 Coffea canephora HOM05D000267 ORTHO05D009944 7.9e-26 120.2 74 81.1
TWI79G0018 Tripterygium wilfordii HOM05D000267 ORTHO05D009944 1.3e-25 119.4 74 74.3
GSVIVG01023990001 Vitis vinifera HOM05D000267 ORTHO05D009944 1.3e-25 119.4 73 78.1
Atru.chr5.3400 Acer truncatum HOM05D000267 ORTHO05D009944 1.8e-25 119.0 75 76.0
FAN20G0365 Fragaria x ananassa HOM05D000267 ORTHO05D009944 5.1e-25 117.5 74 74.3
FAN24G1303 Fragaria x ananassa HOM05D000267 ORTHO05D009944 5.1e-25 117.5 74 74.3
FAN27G0796 Fragaria x ananassa HOM05D000267 ORTHO05D009944 5.1e-25 117.5 74 74.3
Cpa.g.sc20.108 Carica papaya HOM05D000267 ORTHO05D009944 1.9e-24 115.5 74 75.7
FAN15G3022 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.9e-24 115.5 74 74.3
EL10Ac9g21344 Beta vulgaris HOM05D000267 ORTHO05D009944 2.5e-24 115.2 74 71.6
Ciclev10028457m.g Citrus clementina HOM05D000267 ORTHO05D009944 4.3e-24 114.4 74 73.0
THA.LOC104807804 Tarenaya hassleriana HOM05D000267 ORTHO05D009944 4.3e-24 114.4 74 71.6
FvH4_2g15600 Fragaria vesca HOM05D000267 ORTHO05D009944 5.6e-24 114.0 74 73.0
ClCG02G012080 Citrullus lanatus HOM05D000267 ORTHO05D009944 9.6e-24 113.2 74 71.6
CsaV3_2G016240 Cucumis sativus L. HOM05D000267 ORTHO05D009944 9.6e-24 113.2 74 73.0
Manes.11G097600 Manihot esculenta HOM05D000267 ORTHO05D009944 9.6e-24 113.2 74 73.0
Gohir.D12G036200 Gossypium hirsutum HOM05D000267 ORTHO05D009944 4.8e-23 110.9 74 73.0
Gorai.008G037400 Gossypium raimondii HOM05D000267 ORTHO05D009944 4.8e-23 110.9 74 73.0
TAR628G1652 Trochodendron aralioides HOM05D000267 ORTHO05D009944 4.8e-23 110.9 74 71.6
AUR62015150 Chenopodium quinoa HOM05D000267 ORTHO05D009944 6.2e-23 110.5 74 68.9
MELO3C020832.2 Cucumis melo HOM05D000267 ORTHO05D009944 6.2e-23 110.5 79 65.8
Gohir.A12G036400 Gossypium hirsutum HOM05D000267 ORTHO05D009944 6.2e-23 110.5 74 73.0
Potri.004G177400 Populus trichocarpa HOM05D000267 ORTHO05D009944 8.2e-23 110.2 74 70.3
MBI05_g00165_MAGBIO Magnolia biondii HOM05D000267 ORTHO05D009944 4.0e-22 107.8 74 64.9
Sed0004064 Sechium edule HOM05D000267 ORTHO05D009944 4.0e-22 107.8 74 70.3
AUR62013005 Chenopodium quinoa HOM05D000267 ORTHO05D009944 1.2e-21 106.3 74 66.2
Atru.chr5.3388 Acer truncatum HOM05D000267 ORTHO05D009944 1.5e-21 105.9 86 64.0
Atru.chr5.3392 Acer truncatum HOM05D000267 ORTHO05D009944 1.5e-21 105.9 68 72.1
AUR62010015 Chenopodium quinoa HOM05D000267 ORTHO05D009944 2.6e-21 105.1 74 66.2
CiPaw.05G084800 Carya illinoinensis HOM05D000267 ORTHO05D009944 4.5e-21 104.4 105 56.2
Nn5g30837 Nelumbo nucifera HOM05D000267 ORTHO05D009944 5.8e-21 104.0 74 63.5
Eucgr.I01454 Eucalyptus grandis HOM05D000267 ORTHO05D009944 7.6e-21 103.6 74 64.9
Migut.B00061 Erythranthe guttata HOM05D000267 ORTHO05D009944 1.7e-20 102.4 74 67.6
Sc14g0002320 Simmondsia chinensis HOM05D000267 ORTHO05D009944 2.9e-20 101.7 74 63.5
Ah.01g023200 Amaranthus hybridus HOM05D000267 ORTHO05D009944 4.9e-20 100.9 74 60.8
ATR0661G537 Amborella trichopoda HOM05D000267 ORTHO05D009944 1.4e-19 99.4 74 63.5
Hund06449 Selenicereus undatus HOM05D000267 ORTHO05D009944 1.2e-18 96.3 67 64.2
Mapoly0001s0154 Marchantia polymorpha HOM05D000267 ORTHO05D009944 2.3e-17 92.0 74 56.8
AagrBONN_evm.TU.Sc2ySwM_344.2069 Anthoceros agrestis HOM05D000267 ORTHO05D009944 3.0e-17 91.7 74 55.4
SMO367G0708 Selaginella moellendorffii HOM05D000267 ORTHO05D009944 8.7e-17 90.1 74 58.1
Pp3c3_37260 Physcomitrium patens HOM05D000267 ORTHO05D009944 1.1e-16 89.7 74 55.4
RcHm_v2.0_Chr6g0255801 Rosa chinensis HOM05D000267 ORTHO05D009944 1.9e-16 89.0 53 75.5
SalBow1G0833 Salvia bowleyana HOM05D000267 ORTHO05D009944 7.4e-16 87.0 73 60.3
Oeu015554.3 Olea europaea HOM05D000267 ORTHO05D002764 4.8e-15 84.3 61 65.6
Os04g0560500 Oryza sativa ssp. japonica HOM05D000267 ORTHO05D009944 4.1e-14 81.3 74 45.9
RcHm_v2.0_Chr6g0278801 Rosa chinensis HOM05D000267 ORTHO05D009944 2.0e-13 79.0 44 75.0
Zm00001eb074100 Zea mays HOM05D000267 ORTHO05D009944 2.9e-12 75.1 62 45.2
Nitab4.5_0000079g0250 Nicotiana tabacum HOM05D000267 ORTHO05D000298 2.1e-10 68.9 74 54.1
Pp3c21_13310 Physcomitrium patens HOM05D000267 ORTHO05D009944 2.1e-10 68.9 74 44.6
Sabra04G0119300 Salix brachista HOM05D000267 ORTHO05D009944 3.0e-09 65.1 43 60.5
Cre13.g587500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 9.7e-08 60.1 72 37.5
AagrBONN_evm.TU.Sc2ySwM_228.1198 Anthoceros agrestis HOM05D000267 ORTHO05D009944 1.3e-07 59.7 75 42.7
Nitab4.5_0007484g0010 Nicotiana tabacum HOM05D000267 ORTHO05D009944 5.3e-06 54.3 31 87.1
Thecc.02G059600 Theobroma cacao HOM05D000267 ORTHO05D009944 5.3e-06 54.3 38 73.7


User provided reference genes

Program Settings