Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A367G52 Lonicera japonica HOM05D005911 ORTHO05D007565 8.5e-185 650.2 331 100.0
Dinv42087 Davidia involucrata HOM05D005911 ORTHO05D007565 3.2e-115 419.1 287 74.2
CSS0013374 Camellia sinensis var. sinensis HOM05D005911 ORTHO05D007565 1.4e-110 403.7 286 72.4
Hma1.2p1_0066F.1_g036670 Hydrangea macrophylla HOM05D005911 ORTHO05D007565 2.6e-109 399.4 287 70.4
TAR628G1003 Trochodendron aralioides HOM05D005911 ORTHO05D007565 1.9e-107 393.3 287 68.3
GSVIVG01024153001 Vitis vinifera HOM05D005911 ORTHO05D007565 5.1e-105 385.2 287 70.0
Nitab4.5_0001794g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 3.3e-104 382.5 287 66.2
Actinidia17824 Actinidia chinensis HOM05D005911 ORTHO05D007565 2.1e-103 379.8 286 69.9
Rhsim05G0076000 Rhododendron simsii HOM05D005911 ORTHO05D007565 8.2e-103 377.9 288 67.0
Haze_02358 Corylus avellana HOM05D005911 ORTHO05D009502 1.1e-102 377.5 297 66.0
CAN.G322.116 Capsicum annuum HOM05D005911 ORTHO05D007565 2.4e-102 376.3 287 64.8
Nitab4.5_0008989g0030 Nicotiana tabacum HOM05D005911 ORTHO05D007565 2.4e-102 376.3 287 65.9
MD10G1080400 Malus domestica HOM05D005911 ORTHO05D007565 1.2e-101 374.0 287 66.2
DCAR_003638 Daucus carota HOM05D005911 ORTHO05D007565 7.6e-101 371.3 288 66.7
Oeu014335.1 Olea europaea HOM05D005911 ORTHO05D007565 5.0e-100 368.6 287 66.2
Peaxi162Scf00016g00941 Petunia axillaris HOM05D005911 ORTHO05D007565 5.0e-100 368.6 288 64.2
Solyc01g109450.3 Solanum lycopersicum HOM05D005911 ORTHO05D007565 5.0e-100 368.6 287 64.8
Sopen01g051640 Solanum pennellii HOM05D005911 ORTHO05D007565 6.5e-100 368.2 287 64.8
MSTRG.20102 Avicennia marina HOM05D005911 ORTHO05D007565 1.4e-99 367.1 287 64.5
PGSC0003DMG400025190 Solanum tuberosum HOM05D005911 ORTHO05D007565 1.4e-99 367.1 287 64.1
Atru.chr5.2957 Acer truncatum HOM05D005911 ORTHO05D007565 2.5e-99 366.3 287 65.5
QL11p042848 Quercus lobata HOM05D005911 ORTHO05D007565 9.3e-99 364.4 287 66.9
Sed0023974 Sechium edule HOM05D005911 ORTHO05D007565 9.3e-99 364.4 287 62.7
TWI31G0066 Tripterygium wilfordii HOM05D005911 ORTHO05D007565 9.3e-99 364.4 287 64.8
Cfa005027 Carpinus fangiana HOM05D005911 ORTHO05D007565 1.6e-98 363.6 287 65.9
vmacro19435 Vaccinium macrocarpon HOM05D005911 ORTHO05D007565 2.7e-98 362.8 287 65.2
Lalb_Chr16g0385211 Lupinus albus HOM05D005911 ORTHO05D007565 1.8e-97 360.1 287 64.8
Prupe.8G101700 Prunus persica HOM05D005911 ORTHO05D007565 1.8e-97 360.1 287 64.8
Nn1g05068 Nelumbo nucifera HOM05D005911 ORTHO05D007565 3.0e-97 359.4 287 63.8
Lj4g0018405 Lotus japonicus HOM05D005911 ORTHO05D007565 2.5e-96 356.3 287 62.4
Migut.N01227 Erythranthe guttata HOM05D005911 ORTHO05D007565 3.3e-96 355.9 287 63.4
Manes.17G099400 Manihot esculenta HOM05D005911 ORTHO05D007565 4.3e-96 355.5 287 65.5
ECA236G0345 Erigeron canadensis HOM05D005911 ORTHO05D007565 5.7e-96 355.1 291 63.6
FAN20G0571 Fragaria x ananassa HOM05D005911 ORTHO05D007565 7.4e-96 354.8 288 61.8
COL.COLO4_32449 Corchorus olitorius HOM05D005911 ORTHO05D007565 9.7e-96 354.4 288 63.9
Psat3g133040 Pisum sativum HOM05D005911 ORTHO05D007565 9.7e-96 354.4 287 62.7
FAN15G1485 Fragaria x ananassa HOM05D005911 ORTHO05D007565 2.8e-95 352.8 287 61.7
CiPaw.06G137300 Carya illinoinensis HOM05D005911 ORTHO05D007565 6.3e-95 351.7 287 63.4
RcHm_v2.0_Chr6g0263461 Rosa chinensis HOM05D005911 ORTHO05D007565 8.2e-95 351.3 287 61.0
MBI16_g17455_MAGBIO Magnolia biondii HOM05D005911 ORTHO05D007565 1.4e-94 350.5 288 61.1
FAN24G3462 Fragaria x ananassa HOM05D005911 ORTHO05D007565 2.4e-94 349.7 287 61.3
FvH4_2g08380 Fragaria vesca HOM05D005911 ORTHO05D007565 3.1e-94 349.4 287 61.3
CsaV3_7G023300 Cucumis sativus L. HOM05D005911 ORTHO05D007565 6.9e-94 348.2 288 63.5
Thecc.02G123100 Theobroma cacao HOM05D005911 ORTHO05D007565 6.9e-94 348.2 288 61.8
Cc02_g17800 Coffea canephora HOM05D005911 ORTHO05D007565 2.0e-93 346.7 287 63.1
Duzib248G0238 Durio zibethinus HOM05D005911 ORTHO05D007565 3.4e-93 345.9 288 62.2
HanXRQChr16g0504971 Helianthus annuus HOM05D005911 ORTHO05D007565 3.4e-93 345.9 291 61.9
Gohir.D04G144200 Gossypium hirsutum HOM05D005911 ORTHO05D007565 4.5e-93 345.5 288 62.2
ClCG02G005220 Citrullus lanatus HOM05D005911 ORTHO05D007565 5.9e-93 345.1 288 61.8
SalBow3G0191 Salvia bowleyana HOM05D005911 ORTHO05D007565 5.9e-93 345.1 293 61.1
Gorai.012G129800 Gossypium raimondii HOM05D005911 ORTHO05D007565 1.3e-92 344.0 288 61.8
Medtr4g084100 Medicago truncatula HOM05D005911 ORTHO05D007565 1.3e-92 344.0 287 62.0
Potri.004G152100 Populus trichocarpa HOM05D005911 ORTHO05D007565 1.7e-92 343.6 286 62.9
Glyma.20G019800 Glycine max HOM05D005911 ORTHO05D007565 2.2e-92 343.2 288 61.1
TPR.G20990 Trifolium pratense HOM05D005911 ORTHO05D007565 2.9e-92 342.8 287 61.3
Ca_18760_v3 Cicer arietinum L. HOM05D005911 ORTHO05D007565 3.8e-92 342.4 287 61.3
Phvul.007G233200 Phaseolus vulgaris HOM05D005911 ORTHO05D007565 3.8e-92 342.4 287 59.6
Cpa.g.sc62.118 Carica papaya HOM05D005911 ORTHO05D007565 4.2e-91 339.0 287 63.8
arahy.Tifrunner.gnm1.ann1.CA4G6V Arachis hypogaea HOM05D005911 ORTHO05D007565 7.2e-91 338.2 287 60.6
VMungo0720G1659 Vigna mungo HOM05D005911 ORTHO05D007565 1.2e-90 337.4 315 57.1
MELO3C012560.2 Cucumis melo HOM05D005911 ORTHO05D007565 1.6e-90 337.0 308 59.4
Aqoxy5G01675 Aquilegia oxysepala HOM05D005911 ORTHO05D007565 9.7e-88 327.8 289 60.9
Sabra04G0100900 Salix brachista HOM05D005911 ORTHO05D007565 5.3e-86 322.0 325 56.0
SGA_v2.0_scaffold44G16630 Striga asiatica HOM05D005911 ORTHO05D007565 5.3e-86 322.0 287 58.2
AUR62011353 Chenopodium quinoa HOM05D005911 ORTHO05D007565 5.5e-83 312.0 287 56.8
Hund00288 Selenicereus undatus HOM05D005911 ORTHO05D007565 3.6e-82 309.3 287 55.7
Sc14g0001790 Simmondsia chinensis HOM05D005911 ORTHO05D007565 7.9e-82 308.1 305 53.8
PGR042G3082 Punica granatum HOM05D005911 ORTHO05D009502 1.0e-81 307.8 288 55.6
AUR62016709 Chenopodium quinoa HOM05D005911 ORTHO05D007565 1.4e-81 307.4 287 56.4
Nitab4.5_0000443g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 6.7e-81 305.1 286 58.0
Sp1g36210 Schrenkiella parvula HOM05D005911 ORTHO05D007565 2.8e-79 299.7 283 55.5
ATR0733G150 Amborella trichopoda HOM05D005911 ORTHO05D007565 8.2e-79 298.1 318 50.3
EL10Ac9g21750 Beta vulgaris HOM05D005911 ORTHO05D007565 2.4e-78 296.6 287 54.4
Thhalv10011559m.g Eutrema salsugineum HOM05D005911 ORTHO05D007565 2.6e-77 293.1 283 54.8
Sc14g0001910 Simmondsia chinensis HOM05D005911 ORTHO05D007565 1.7e-76 290.4 291 53.6
CAN.G149.23 Capsicum annuum HOM05D005911 ORTHO05D007565 2.9e-76 289.7 289 53.3
Eucgr.G00462 Eucalyptus grandis HOM05D005911 ORTHO05D007565 8.5e-76 288.1 287 52.3
Carub.0001s3853 Capsella rubella HOM05D005911 ORTHO05D007565 2.5e-75 286.6 283 53.7
AL1G56310 Arabidopsis lyrata HOM05D005911 ORTHO05D007565 3.2e-75 286.2 283 52.7
THA.LOC104804910 Tarenaya hassleriana HOM05D005911 ORTHO05D007565 5.5e-75 285.4 287 52.6
AT1G49350 Arabidopsis thaliana HOM05D005911 ORTHO05D007565 1.6e-74 283.9 288 53.1
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 2.1e-74 283.5 283 53.4
Eucgr.G01900 Eucalyptus grandis HOM05D005911 ORTHO05D007565 2.7e-74 283.1 287 51.9
BcaB02g11057 Brassica carinata HOM05D005911 ORTHO05D007565 3.6e-74 282.7 283 54.4
BraA05t20973Z Brassica rapa HOM05D005911 ORTHO05D007565 1.8e-73 280.4 285 53.7
BcaC05g27521 Brassica carinata HOM05D005911 ORTHO05D007565 4.0e-73 279.3 285 53.7
C05p34970 Brassica napus HOM05D005911 ORTHO05D007565 4.0e-73 279.3 285 53.7
Os05g0185700 Oryza sativa ssp. japonica HOM05D005911 ORTHO05D007565 5.2e-73 278.9 289 51.6
C05p34650 Brassica napus HOM05D005911 ORTHO05D007565 1.1e-72 277.7 285 53.7
Gohir.A04G104400 Gossypium hirsutum HOM05D005911 ORTHO05D007565 2.6e-72 276.6 288 51.7
BolC5t32220H Brassica oleracea HOM05D005911 ORTHO05D007565 4.4e-72 275.8 285 53.0
A05p20650 Brassica napus HOM05D005911 ORTHO05D007565 7.5e-72 275.0 285 53.3
AL1G56510 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 1.3e-71 274.2 284 52.8
BcaC05g27500 Brassica carinata HOM05D005911 ORTHO05D007565 1.3e-71 274.2 285 53.3
Zm00001eb346550 Zea mays HOM05D005911 ORTHO05D007565 6.3e-71 271.9 289 50.2
BolC5t32198H Brassica oleracea HOM05D005911 ORTHO05D007565 1.2e-69 267.7 309 49.8
Ciclev10029888m.g Citrus clementina HOM05D005911 ORTHO05D007565 1.6e-69 267.3 232 61.6
SEGI_31956 Sequoiadendron giganteum HOM05D005911 ORTHO05D007565 2.7e-66 256.5 322 46.0
Potri.004G151600 Populus trichocarpa HOM05D005911 ORTHO05D007565 2.0e-64 250.4 208 61.1
Lsat_1_v5_gn_7_89660 Lactuca sativa HOM05D005911 ORTHO05D007565 2.6e-64 250.0 288 51.0
SGA_v2.0_scaffold55G19804 Striga asiatica HOM05D005911 ORTHO05D007565 1.7e-60 237.3 206 59.2
unitig_22.g6840 Utricularia gibba HOM05D005911 ORTHO05D007565 4.1e-54 216.1 231 51.5
AagrBONN_evm.TU.Sc2ySwM_117.291 Anthoceros agrestis HOM05D005911 ORTHO05D007565 1.4e-46 191.0 284 41.2
Pp3c15_14160 Physcomitrium patens HOM05D005911 ORTHO05D007565 2.0e-45 187.2 317 36.0
Ah.01g006180 Amaranthus hybridus HOM05D002934 ORTHO05D003937 1.7e-44 184.1 203 50.2
FAN27G2671 Fragaria x ananassa HOM05D005911 ORTHO05D007565 3.6e-42 176.4 131 64.9
CDE02G3889 Ceratophyllum demersum HOM05D005911 ORTHO05D007565 9.8e-40 168.3 288 37.2
Mapoly0044s0080 Marchantia polymorpha HOM05D005911 ORTHO05D007565 1.3e-39 167.9 295 35.6
CBR_g27891 Chara braunii HOM05D005911 ORTHO05D007565 4.1e-38 162.9 328 33.2
Eucgr.G01892 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.0e-36 158.3 189 47.6
CARHR039340 Cardamine hirsuta HOM05D005911 ORTHO05D007565 2.1e-34 150.6 171 48.5
CARHR039360 Cardamine hirsuta HOM05D005911 ORTHO05D007565 2.8e-34 150.2 172 47.7
TAR371G0586 Trochodendron aralioides HOM05D005911 ORTHO05D007565 7.1e-30 135.6 162 49.4
A05p20720 Brassica napus HOM05D005911 ORTHO05D007565 3.5e-29 133.3 146 50.7
BraA05t20979Z Brassica rapa HOM05D005911 ORTHO05D007565 3.5e-29 133.3 146 50.7
Eucgr.G00468 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.1e-27 128.3 150 44.7
Gorai.008G153200 Gossypium raimondii HOM05D005911 ORTHO05D007565 1.6e-26 124.4 101 60.4
MCO11G507 Micromonas commoda HOM05D005911 ORTHO05D007565 8.9e-25 118.6 307 31.3
PRCOL_00000481 Prasinoderma coloniale HOM05D005911 ORTHO05D007565 1.1e-19 101.7 274 29.2
arahy.Tifrunner.gnm1.ann1.IUSJ9T Arachis hypogaea HOM05D005911 ORTHO05D007565 4.3e-19 99.8 75 70.7
AagrBONN_evm.TU.Sc2ySwM_228.5516 Anthoceros agrestis HOM05D005911 ORTHO05D007565 5.6e-19 99.4 111 45.0
TAR371G0927 Trochodendron aralioides HOM05D005911 ORTHO05D007565 8.1e-18 95.5 108 52.8
Cre17.g701100 Chlamydomonas reinhardtii HOM05D005911 ORTHO05D007565 8.4e-15 85.5 113 43.4
CARHR039370 Cardamine hirsuta HOM05D005911 ORTHO05D007565 4.2e-14 83.2 92 47.8
QL11p051325 Quercus lobata HOM05D005911 ORTHO05D007565 1.7e-07 61.2 42 78.6
QL04p035577 Quercus lobata HOM05D005911 ORTHO05D007565 7.1e-06 55.8 61 54.1


User provided reference genes

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