Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A366T70 Lonicera japonica HOM05D028468 ORTHO05D000126 1.5e-97 359.4 165 100.0
Lj9C366T4 Lonicera japonica HOM05D028468 ORTHO05D000126 4.6e-54 214.9 115 87.8
Lj9C366T5 Lonicera japonica HOM05D028468 ORTHO05D000126 2.0e-49 199.5 161 62.7
Lj9A366G73 Lonicera japonica HOM05D028468 ORTHO05D000126 2.1e-43 179.5 126 72.2
Lj2P989T21 Lonicera japonica HOM05D000003 ORTHO05D000126 1.5e-12 77.0 75 46.7
Lj9C38T11 Lonicera japonica HOM05D000003 ORTHO05D000126 1.5e-12 77.0 75 46.7
Lj6C513G2 Lonicera japonica HOM05D000003 ORTHO05D000126 4.8e-11 72.0 94 38.3
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 1.8e-10 70.1 155 28.4
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 4.0e-10 68.9 155 27.7
Atru.chr12.2030 Acer truncatum HOM05D000003 ORTHO05D000126 5.3e-10 68.6 100 35.0
Atru.chr8.822 Acer truncatum HOM05D000003 ORTHO05D000167 5.3e-10 68.6 136 34.6
Atru.chr1.1793 Acer truncatum HOM05D000003 ORTHO05D000126 6.9e-10 68.2 77 42.9
Atru.chr12.856 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-09 65.5 98 32.7
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 5.8e-09 65.1 96 34.4
Dinv06062 Davidia involucrata HOM05D000003 ORTHO05D000126 7.6e-09 64.7 151 28.5
Lj4C893T10 Lonicera japonica HOM05D000003 ORTHO05D000126 7.6e-09 64.7 76 42.1
TPR.G23677 Trifolium pratense HOM05D000003 ORTHO05D000126 1.3e-08 63.9 169 24.3
AUR62034731 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.7e-08 63.5 106 33.0
Atru.chr3.1587 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-08 63.2 78 34.6
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 2.2e-08 63.2 83 38.6
Atru.chr13.1329 Acer truncatum HOM05D000003 ORTHO05D000126 2.9e-08 62.8 93 35.5
Atru.chr13.697 Acer truncatum HOM05D000003 ORTHO05D000126 2.9e-08 62.8 99 32.3
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 3.8e-08 62.4 155 28.4
Atru.chr11.1277 Acer truncatum HOM05D000003 ORTHO05D000126 4.9e-08 62.0 72 40.3
Lj6P401T12 Lonicera japonica HOM05D000003 ORTHO05D000126 4.9e-08 62.0 75 37.3
Atru.chr3.1568 Acer truncatum HOM05D000003 ORTHO05D000126 8.4e-08 61.2 68 36.8
Atru.chr9.912 Acer truncatum HOM05D000003 ORTHO05D000126 8.4e-08 61.2 98 34.7
Sed0009453 Sechium edule HOM05D000003 ORTHO05D000126 8.4e-08 61.2 107 34.6
CSS0016982 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.1e-07 60.8 88 36.4
FvH4_3g05891 Fragaria vesca HOM05D000003 ORTHO05D000126 1.1e-07 60.8 117 29.9
Lju432C6G5 Lonicera japonica HOM05D007424 ORTHO05D000126 1.1e-07 60.8 74 36.5
Atru.chr1.3557 Acer truncatum HOM05D000003 ORTHO05D000126 1.4e-07 60.5 95 34.7
CSS0004935 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.4e-07 60.5 88 36.4
Dinv06832 Davidia involucrata HOM05D000003 ORTHO05D000126 1.4e-07 60.5 83 33.7
Lj1g0010193 Lotus japonicus HOM05D000003 ORTHO05D000126 1.4e-07 60.5 104 34.6
Lj5g0024244 Lotus japonicus HOM05D000003 ORTHO05D000126 1.9e-07 60.1 83 37.3
Sed0000613 Sechium edule HOM05D000003 ORTHO05D000126 1.9e-07 60.1 107 33.6
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.5e-07 59.7 95 34.7
AUR62020327 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.5e-07 59.7 81 35.8
AUR62044315 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.5e-07 59.7 81 35.8
Atru.chr1.2640 Acer truncatum HOM05D000003 ORTHO05D000126 3.2e-07 59.3 99 30.3
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 3.2e-07 59.3 93 34.4
AUR62029276 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.2e-07 59.3 81 37.0
AUR62029277 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.2e-07 59.3 81 37.0
Dinv18185 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-07 59.3 98 33.7
Dinv23120 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-07 59.3 121 28.1
Prupe.7G053200 Prunus persica HOM05D000003 ORTHO05D000126 3.2e-07 59.3 87 35.6
QL05p028552 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-07 59.3 142 33.1
AUR62032102 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.2e-07 58.9 100 35.0
Sed0025570 Sechium edule HOM05D000003 ORTHO05D000126 4.2e-07 58.9 80 38.8
Atru.chr8.897 Acer truncatum HOM05D000003 ORTHO05D000126 5.5e-07 58.5 124 27.4
AUR62022274 Chenopodium quinoa HOM05D000003 ORTHO05D000126 5.5e-07 58.5 117 33.3
QL05p026561 Quercus lobata HOM05D000003 ORTHO05D000126 5.5e-07 58.5 141 27.7
TPR.G16107 Trifolium pratense HOM05D000003 ORTHO05D000126 5.5e-07 58.5 94 31.9
Dinv16534 Davidia involucrata HOM05D000003 ORTHO05D000126 7.1e-07 58.2 155 27.1
Lj7A3G14 Lonicera japonica HOM05D000003 ORTHO05D000126 7.1e-07 58.2 75 37.3
TPR.G31906 Trifolium pratense HOM05D000003 ORTHO05D000006 7.1e-07 58.2 132 28.0
Atru.chr2.314 Acer truncatum HOM05D000003 ORTHO05D000126 9.3e-07 57.8 144 29.9
Atru.chr5.1805 Acer truncatum HOM05D000003 ORTHO05D000126 9.3e-07 57.8 75 37.3
Atru.chr8.1650 Acer truncatum HOM05D000003 ORTHO05D000126 9.3e-07 57.8 97 33.0
Ah.14g082690 Amaranthus hybridus HOM05D000003 ORTHO05D000126 9.3e-07 57.8 82 39.0
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 9.3e-07 57.8 96 37.5
Haze_05455 Corylus avellana HOM05D000003 ORTHO05D000126 9.3e-07 57.8 95 34.7
Prupe.7G053800 Prunus persica HOM05D000003 ORTHO05D000126 9.3e-07 57.8 91 38.5
Sed0013654 Sechium edule HOM05D000003 ORTHO05D000126 9.3e-07 57.8 75 37.3
Atru.chr11.854 Acer truncatum HOM05D000003 ORTHO05D000126 1.2e-06 57.4 81 37.0
Atru.chr3.2526 Acer truncatum HOM05D000003 ORTHO05D000126 1.2e-06 57.4 103 34.0
Atru.chr8.603 Acer truncatum HOM05D000003 ORTHO05D000126 1.2e-06 57.4 126 28.6
Lj6g0022847 Lotus japonicus HOM05D000003 ORTHO05D000126 1.2e-06 57.4 104 31.7
Atru.chr4.1955 Acer truncatum HOM05D000003 ORTHO05D000126 1.6e-06 57.0 73 35.6
AUR62035818 Chenopodium quinoa HOM05D000003 ORTHO05D000006 1.6e-06 57.0 88 34.1
Gorai.008G165000 Gossypium raimondii HOM05D000003 ORTHO05D000126 1.6e-06 57.0 72 41.7
Sed0012633 Sechium edule HOM05D000003 ORTHO05D000126 1.6e-06 57.0 82 39.0
Atru.chr13.2083 Acer truncatum HOM05D000003 ORTHO05D000006 2.1e-06 56.6 123 30.9
Atru.chr2.2359 Acer truncatum HOM05D000003 ORTHO05D000126 2.1e-06 56.6 72 34.7
Dinv30133 Davidia involucrata HOM05D000003 ORTHO05D000126 2.1e-06 56.6 92 32.6
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 2.1e-06 56.6 78 35.9
QL12p041140 Quercus lobata HOM05D000003 ORTHO05D000126 2.1e-06 56.6 87 34.5
Atru.chr12.1783 Acer truncatum HOM05D000003 ORTHO05D000126 2.7e-06 56.2 84 32.1
Atru.chr12.2219 Acer truncatum HOM05D000003 ORTHO05D000126 2.7e-06 56.2 76 32.9
Atru.chr13.1579 Acer truncatum HOM05D000003 ORTHO05D000126 3.5e-06 55.8 62 35.5
QL02p095319 Quercus lobata HOM05D000003 ORTHO05D000126 3.5e-06 55.8 124 33.1
Sed0017531 Sechium edule HOM05D000003 ORTHO05D000126 3.5e-06 55.8 133 27.8
TWI63G1223 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 3.5e-06 55.8 71 36.6
Atru.chr11.833 Acer truncatum HOM05D000003 ORTHO05D000126 4.6e-06 55.5 72 37.5
Sed0005607 Sechium edule HOM05D000003 ORTHO05D000126 4.6e-06 55.5 113 31.9
Sed0009361 Sechium edule HOM05D028843 ORTHO05D000126 4.6e-06 55.5 121 30.6
Atru.chr10.111 Acer truncatum HOM05D000003 ORTHO05D000126 6.0e-06 55.1 97 35.1
Atru.chr10.94 Acer truncatum HOM05D000003 ORTHO05D000126 6.0e-06 55.1 97 35.1
Atru.chr3.3485 Acer truncatum HOM05D000003 ORTHO05D000126 6.0e-06 55.1 98 30.6
Atru.chr9.617 Acer truncatum HOM05D000003 ORTHO05D000126 6.0e-06 55.1 75 37.3
Atru.chr9.710 Acer truncatum HOM05D000003 ORTHO05D000126 6.0e-06 55.1 76 35.5
AUR62030344 Chenopodium quinoa HOM05D000003 ORTHO05D000126 6.0e-06 55.1 78 37.2
SGA_v2.0_scaffold308G48078 Striga asiatica HOM05D000003 ORTHO05D000126 6.0e-06 55.1 103 29.1
Atru.chr5.3356 Acer truncatum HOM05D000003 ORTHO05D000126 7.9e-06 54.7 96 31.2
AUR62022247 Chenopodium quinoa HOM05D000003 ORTHO05D000126 7.9e-06 54.7 115 27.0
AUR62026564 Chenopodium quinoa HOM05D000003 ORTHO05D000126 7.9e-06 54.7 91 35.2
Haze_03036 Corylus avellana HOM05D021515 ORTHO05D016203 7.9e-06 54.7 95 33.7


User provided reference genes

Program Settings