Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A361T59 Lonicera japonica HOM05D005562 ORTHO05D007785 3.3e-231 804.7 402 100.0
Dinv23596 Davidia involucrata HOM05D005562 ORTHO05D001378 2.6e-196 688.7 402 85.1
Migut.B00304 Erythranthe guttata HOM05D005562 ORTHO05D007785 1.1e-191 673.3 403 83.4
Oeu057671.1 Olea europaea HOM05D005562 ORTHO05D007785 4.8e-190 667.9 402 82.8
Nn1g04154 Nelumbo nucifera HOM05D005562 ORTHO05D007785 5.9e-188 661.0 405 80.2
Hma1.2p1_0584F.1_g183170 Hydrangea macrophylla HOM05D005562 ORTHO05D007785 1.4e-186 656.4 410 80.0
TAR381G1284 Trochodendron aralioides HOM05D005562 ORTHO05D007785 3.2e-186 655.2 405 80.5
GSVIVG01031808001 Vitis vinifera HOM05D005562 ORTHO05D007785 4.6e-185 651.4 400 81.5
Cc07_g19550 Coffea canephora HOM05D005562 ORTHO05D007785 1.4e-184 649.8 393 82.2
CSS0049808 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D007785 6.7e-184 647.5 402 80.8
DCAR_022068 Daucus carota HOM05D005562 ORTHO05D001378 8.8e-184 647.1 417 77.7
Sopen01g050880 Solanum pennellii HOM05D005562 ORTHO05D007785 2.0e-183 646.0 405 79.8
PGSC0003DMG402025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 2.5e-183 645.6 405 80.5
MSTRG.5375 Avicennia marina HOM05D005562 ORTHO05D007785 4.3e-183 644.8 403 80.1
SGA_v2.0_scaffold32G13119 Striga asiatica HOM05D005562 ORTHO05D007785 4.3e-183 644.8 401 79.1
Rhsim05G0079900 Rhododendron simsii HOM05D005562 ORTHO05D007785 7.4e-183 644.0 402 79.6
Solyc01g108660.4 Solanum lycopersicum HOM05D005562 ORTHO05D007785 9.7e-183 643.7 405 79.3
MBI16_g19905_MAGBIO Magnolia biondii HOM05D005562 ORTHO05D007785 4.1e-181 638.3 405 79.3
Peaxi162Scf00016g01531 Petunia axillaris HOM05D005562 ORTHO05D007785 9.1e-181 637.1 403 78.7
TAR625G0430 Trochodendron aralioides HOM05D005562 ORTHO05D007785 7.7e-180 634.0 386 81.6
CAN.G322.41 Capsicum annuum HOM05D005562 ORTHO05D007785 3.8e-179 631.7 409 77.5
SalBow3G1434 Salvia bowleyana HOM05D005562 ORTHO05D007785 3.8e-179 631.7 403 79.4
Ciclev10028560m.g Citrus clementina HOM05D005562 ORTHO05D007785 1.2e-177 626.7 408 77.2
unitig_26.g10242 Utricularia gibba HOM05D005562 ORTHO05D007785 6.1e-177 624.4 387 79.8
Eucgr.I01182 Eucalyptus grandis HOM05D005562 ORTHO05D007785 2.6e-175 619.0 405 75.8
Atru.chr5.2830 Acer truncatum HOM05D005562 ORTHO05D007785 4.4e-175 618.2 404 75.7
Haze_01878 Corylus avellana HOM05D005562 ORTHO05D007785 1.3e-174 616.7 399 76.7
QL11p038618 Quercus lobata HOM05D005562 ORTHO05D007785 8.2e-174 614.0 404 76.2
Cfa005417 Carpinus fangiana HOM05D005562 ORTHO05D007785 2.4e-173 612.5 405 76.0
Nitab4.5_0003726g0070 Nicotiana tabacum HOM05D005562 ORTHO05D007785 5.3e-173 611.3 405 76.3
EL10Ac3g06682 Beta vulgaris HOM05D005562 ORTHO05D007785 1.2e-172 610.1 400 75.2
ATR0225G001 Amborella trichopoda HOM05D005562 ORTHO05D007785 1.6e-172 609.8 390 77.2
EL10Ac1g01621 Beta vulgaris HOM05D005562 ORTHO05D007785 2.6e-172 609.0 400 75.0
PGSC0003DMG401025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 2.6e-172 609.0 405 77.0
SalBow4G0329 Salvia bowleyana HOM05D005562 ORTHO05D007785 7.7e-172 607.4 434 73.0
Aqoxy5G01421 Aquilegia oxysepala HOM05D005562 ORTHO05D007785 2.9e-171 605.5 388 78.1
Thecc.02G095000 Theobroma cacao HOM05D005562 ORTHO05D007785 1.9e-170 602.8 406 74.6
CiPaw.05G055600 Carya illinoinensis HOM05D005562 ORTHO05D007785 4.2e-170 601.7 402 75.6
AUR62042921 Chenopodium quinoa HOM05D005562 ORTHO05D007785 4.2e-170 601.7 365 80.5
MD00G1050500 Malus domestica HOM05D005562 ORTHO05D007785 4.2e-170 601.7 402 75.9
HPP92_018726 Vanilla planifolia HOM05D005562 ORTHO05D007785 4.2e-170 601.7 400 75.2
FvH4_2g07021 Fragaria vesca HOM05D005562 ORTHO05D007785 7.2e-170 600.9 403 75.9
Duzib248G1341 Durio zibethinus HOM05D005562 ORTHO05D007785 9.4e-170 600.5 406 74.9
THA.LOC104814570 Tarenaya hassleriana HOM05D005562 ORTHO05D007785 1.2e-169 600.1 404 73.8
MD10G1088500 Malus domestica HOM05D005562 ORTHO05D007785 6.1e-169 597.8 356 81.5
FAN27G1497 Fragaria x ananassa HOM05D005562 ORTHO05D007785 1.0e-168 597.0 403 75.4
Sp3g33250 Schrenkiella parvula HOM05D005562 ORTHO05D007785 3.0e-168 595.5 405 73.3
PGR142G1983 Punica granatum HOM05D005562 ORTHO05D007785 5.2e-168 594.7 402 74.1
BcaB07g31395 Brassica carinata HOM05D005562 ORTHO05D007785 1.5e-167 593.2 402 72.9
TWI79G1184 Tripterygium wilfordii HOM05D005562 ORTHO05D007785 1.5e-167 593.2 405 72.8
Lsat_1_v5_gn_9_108961 Lactuca sativa HOM05D005562 ORTHO05D007785 2.0e-167 592.8 402 73.4
RcHm_v2.0_Chr6g0259381 Rosa chinensis HOM05D005562 ORTHO05D007785 2.0e-167 592.8 400 75.0
Prupe.8G115600 Prunus persica HOM05D005562 ORTHO05D007785 9.7e-167 590.5 400 73.8
BraA09t37197Z Brassica rapa HOM05D005562 ORTHO05D007785 2.8e-166 589.0 402 72.6
Aa31LG8G16860 Aethionema arabicum HOM05D005562 ORTHO05D007785 3.7e-166 588.6 402 74.9
Os03g0617900 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 6.3e-166 587.8 369 78.6
Thhalv10023506m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 8.2e-166 587.4 404 73.0
A09p15570 Brassica napus HOM05D005562 ORTHO05D007785 1.8e-165 586.3 402 72.4
BcaC04g22480 Brassica carinata HOM05D005562 ORTHO05D007785 4.1e-165 585.1 403 72.2
BolC9t54784H Brassica oleracea HOM05D005562 ORTHO05D007785 4.1e-165 585.1 403 72.2
Gohir.D13G035800 Gossypium hirsutum HOM05D005562 ORTHO05D007785 7.0e-165 584.3 406 72.9
Sed0010996 Sechium edule HOM05D005562 ORTHO05D007785 2.0e-164 582.8 388 76.0
Carub.0003s3419 Capsella rubella HOM05D005562 ORTHO05D007785 3.5e-164 582.0 405 72.1
CARHR110380 Cardamine hirsuta HOM05D005562 ORTHO05D007785 3.5e-164 582.0 405 72.6
Gohir.A13G037500 Gossypium hirsutum HOM05D005562 ORTHO05D007785 3.5e-164 582.0 400 73.0
TPR.G14865 Trifolium pratense HOM05D005562 ORTHO05D007785 5.9e-164 581.3 402 71.4
MELO3C021919.2 Cucumis melo HOM05D005562 ORTHO05D007785 7.7e-164 580.9 387 76.5
C09p18820 Brassica napus HOM05D005562 ORTHO05D007785 1.0e-163 580.5 403 71.7
Potri.004G145700 Populus trichocarpa HOM05D005562 ORTHO05D007785 5.0e-163 578.2 401 73.3
CsaV3_2G014210 Cucumis sativus L. HOM05D005562 ORTHO05D007785 1.1e-162 577.0 383 75.7
VMungo1215G0206 Vigna mungo HOM05D005562 ORTHO05D007785 1.1e-162 577.0 403 71.5
Manes.15G144000 Manihot esculenta HOM05D005562 ORTHO05D007785 1.9e-162 576.2 406 73.2
TPR.G11154 Trifolium pratense HOM05D005562 ORTHO05D007785 4.2e-162 575.1 400 70.8
Phvul.003G012000 Phaseolus vulgaris HOM05D005562 ORTHO05D007785 5.5e-162 574.7 403 70.5
Glyma.20G009400 Glycine max HOM05D005562 ORTHO05D007785 9.4e-162 573.9 372 75.0
HanXRQChr13g0402421 Helianthus annuus HOM05D005562 ORTHO05D007785 9.4e-162 573.9 390 73.1
PSO210G1477 Papaver somniferum HOM05D005562 ORTHO05D007785 9.4e-162 573.9 403 72.7
AT2G19940 Arabidopsis thaliana HOM05D005562 ORTHO05D007785 1.6e-161 573.2 379 76.0
Gorai.013G040500 Gossypium raimondii HOM05D005562 ORTHO05D007785 1.6e-161 573.2 432 69.0
Lj2g0016235 Lotus japonicus HOM05D005562 ORTHO05D007785 2.7e-161 572.4 400 69.8
Psat6g096120 Pisum sativum HOM05D005562 ORTHO05D007785 2.7e-161 572.4 350 77.4
Lalb_Chr17g0338301 Lupinus albus HOM05D005562 ORTHO05D007785 4.7e-161 571.6 405 70.9
HanXRQChr16g0528561 Helianthus annuus HOM05D005562 ORTHO05D007785 8.0e-161 570.9 398 72.4
Zm00001eb051410 Zea mays HOM05D005562 ORTHO05D007785 1.0e-160 570.5 371 75.7
PSO170G1474 Papaver somniferum HOM05D005562 ORTHO05D007785 1.4e-160 570.1 405 72.3
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 1.8e-160 569.7 336 82.4
Glyma.07G179700 Glycine max HOM05D005562 ORTHO05D007785 1.8e-160 569.7 347 78.7
CANSAT25G3890 Cannabis sativa HOM05D005562 ORTHO05D007785 2.3e-160 569.3 352 76.7
Nitab4.5_0001401g0050 Nicotiana tabacum HOM05D005562 ORTHO05D007785 3.0e-160 568.9 419 70.6
Os10g0494200 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 3.0e-160 568.9 371 76.5
ECA240G1421 Erigeron canadensis HOM05D005562 ORTHO05D007785 5.2e-160 568.2 400 71.0
Medtr1g012540 Medicago truncatula HOM05D005562 ORTHO05D007785 6.8e-160 567.8 363 75.5
arahy.Tifrunner.gnm1.ann1.ZFI36T Arachis hypogaea HOM05D005562 ORTHO05D007785 4.4e-159 565.1 335 80.9
Ah.13g074710 Amaranthus hybridus HOM05D005562 ORTHO05D007785 5.7e-159 564.7 382 75.1
Ca_12473_v3 Cicer arietinum L. HOM05D005562 ORTHO05D007785 9.8e-159 563.9 348 77.0
ClCG09G017590 Citrullus lanatus HOM05D005562 ORTHO05D007785 9.8e-159 563.9 407 71.5
arahy.Tifrunner.gnm1.ann1.4TQ1KW Arachis hypogaea HOM05D005562 ORTHO05D007785 1.7e-158 563.1 376 74.2
CDE01G0106 Ceratophyllum demersum HOM05D005562 ORTHO05D007785 5.4e-157 558.1 327 83.2
vmacro19466 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 5.9e-156 554.7 402 71.9
Sc06g0001440 Simmondsia chinensis HOM05D005562 ORTHO05D007785 3.6e-153 545.4 314 83.8
AagrBONN_evm.TU.Sc2ySwM_117.3897 Anthoceros agrestis HOM05D005562 ORTHO05D007785 4.7e-153 545.0 402 67.7
Pp3c24_19140 Physcomitrium patens HOM05D005562 ORTHO05D007785 1.8e-152 543.1 370 73.2
Pp3c8_22120 Physcomitrium patens HOM05D005562 ORTHO05D007785 3.0e-152 542.3 368 72.0
Mapoly0036s0058 Marchantia polymorpha HOM05D005562 ORTHO05D007785 3.4e-151 538.9 383 70.2
Hund01581 Selenicereus undatus HOM05D005562 ORTHO05D007785 7.5e-151 537.7 464 62.3
BcaC04g19978 Brassica carinata HOM05D005562 ORTHO05D007785 1.3e-150 537.0 359 74.9
SMO116G0475 Selaginella moellendorffii HOM05D005562 ORTHO05D007785 2.8e-150 535.8 370 71.1
Thhalv10002012m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 5.9e-148 528.1 405 67.4
BolC9t57765H Brassica oleracea HOM05D005562 ORTHO05D007785 1.4e-144 516.9 380 69.7
FAN24G3180 Fragaria x ananassa HOM05D005562 ORTHO05D001378 6.8e-144 514.6 352 74.4
AL3G48260 Arabidopsis lyrata HOM05D005562 ORTHO05D007785 1.1e-141 507.3 314 79.9
FAN27G3443 Fragaria x ananassa HOM05D005562 ORTHO05D001378 7.0e-141 504.6 352 73.0
AUR62035865 Chenopodium quinoa HOM05D005562 ORTHO05D007785 1.2e-140 503.8 573 50.3
CBR_g5649 Chara braunii HOM05D005562 ORTHO05D001468 7.8e-140 501.1 398 62.8
vmacro23230 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 1.7e-139 500.0 292 84.2
Cre03.g146187 Chlamydomonas reinhardtii HOM05D005562 ORTHO05D007785 1.8e-128 463.4 377 60.2
PRCOL_00005741 Prasinoderma coloniale HOM05D005562 ORTHO05D007785 2.0e-127 459.9 350 65.1
C09p49210 Brassica napus HOM05D005562 ORTHO05D007785 2.0e-119 433.3 284 75.4
FAN15G1080 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.2e-116 424.1 360 64.2
Actinidia17846 Actinidia chinensis HOM05D005562 ORTHO05D007785 7.4e-82 308.5 194 79.9
DCAR_021731 Daucus carota HOM05D005562 ORTHO05D007785 5.9e-71 272.3 312 52.2
PSO384G1669 Papaver somniferum HOM05D005562 ORTHO05D007785 1.7e-70 270.8 374 45.2
Cpa.g.sc62.58 Carica papaya HOM05D005562 ORTHO05D007785 1.4e-69 267.7 147 85.0
HanXRQChr10g0318401 Helianthus annuus HOM05D005562 ORTHO05D007785 2.7e-68 263.5 220 60.9
Cpa.g.sc62.56 Carica papaya HOM05D005562 ORTHO05D007785 8.5e-54 215.3 186 61.3
Cpa.g.sc26.106 Carica papaya HOM05D005562 ORTHO05D007785 3.2e-53 213.4 152 70.4
Oeu021926.1 Olea europaea HOM05D005562 ORTHO05D007785 9.7e-50 201.8 112 88.4
Actinidia17880 Actinidia chinensis HOM05D005562 ORTHO05D007785 1.8e-43 181.0 112 79.5
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea HOM05D005562 ORTHO05D007785 3.4e-34 150.2 81 85.2
Cfa027024 Carpinus fangiana HOM05D005562 ORTHO05D121372 1.7e-33 147.9 354 30.8
Actinidia17845 Actinidia chinensis HOM05D005562 ORTHO05D030745 3.3e-29 133.7 120 60.0
SEGI_28239 Sequoiadendron giganteum HOM05D005562 ORTHO05D007785 1.5e-26 124.8 66 83.3
CSS0029422 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D111180 3.9e-14 83.6 94 51.1
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 2.1e-12 77.8 73 60.3
A10p14750 Brassica napus HOM05D005562 ORTHO05D007785 3.1e-11 73.9 53 67.9
Glyma.08G079000 Glycine max HOM05D005562 ORTHO05D007785 7.5e-10 69.3 45 68.9
Glyma.08G079050 Glycine max HOM05D005562 ORTHO05D213306 6.4e-09 66.2 78 50.0


User provided reference genes

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