Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A35G21 Lonicera japonica HOM05D003561 ORTHO05D234523 2.8e-73 278.5 138 100.0
Lj9C47T4 Lonicera japonica HOM05D003561 ORTHO05D004351 1.3e-14 83.6 48 83.3
Lj9C43T3 Lonicera japonica HOM05D003561 ORTHO05D004351 1.9e-13 79.7 47 80.9
Lj7C86G5 Lonicera japonica HOM05D003561 ORTHO05D004351 1.6e-12 76.6 66 60.6
Dinv30056 Davidia involucrata HOM05D003561 ORTHO05D004351 4.9e-09 65.1 109 40.4
Hma1.2p1_0239F.1_g099850 Hydrangea macrophylla HOM05D003561 ORTHO05D004351 5.4e-08 61.6 36 77.8
Gohir.D03G026700 Gossypium hirsutum HOM05D003561 ORTHO05D004351 9.2e-08 60.8 36 77.8
Gorai.003G028400 Gossypium raimondii HOM05D003561 ORTHO05D004351 9.2e-08 60.8 36 77.8
Duzib147G0573 Durio zibethinus HOM05D003561 ORTHO05D004351 1.6e-07 60.1 36 77.8
FAN15G0682 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.1e-07 59.7 36 77.8
Haze_15327 Corylus avellana HOM05D003561 ORTHO05D004351 2.7e-07 59.3 81 48.1
PGR102G2010 Punica granatum HOM05D003561 ORTHO05D004351 4.6e-07 58.5 36 75.0
Hund13924 Selenicereus undatus HOM05D003561 ORTHO05D004351 4.6e-07 58.5 36 75.0
Thecc.01G067200 Theobroma cacao HOM05D003561 ORTHO05D004351 4.6e-07 58.5 36 75.0
Cc07_g06660 Coffea canephora HOM05D003561 ORTHO05D004351 6.0e-07 58.2 36 72.2
MD05G1093800 Malus domestica HOM05D003561 ORTHO05D004351 7.8e-07 57.8 36 75.0
Prupe.8G138700 Prunus persica HOM05D003561 ORTHO05D004351 7.8e-07 57.8 36 75.0
RcHm_v2.0_Chr6g0254291 Rosa chinensis HOM05D003561 ORTHO05D004351 7.8e-07 57.8 36 75.0
RcHm_v2.0_Chr6g0254331 Rosa chinensis HOM05D003561 ORTHO05D004351 7.8e-07 57.8 36 75.0
RcHm_v2.0_Chr6g0254371 Rosa chinensis HOM05D003561 ORTHO05D004351 7.8e-07 57.8 36 75.0
GSVIVG01000167001 Vitis vinifera HOM05D003561 ORTHO05D004351 7.8e-07 57.8 36 72.2
Peaxi162Scf00449g00016 Petunia axillaris HOM05D003561 ORTHO05D004351 1.0e-06 57.4 87 42.5
Prupe.6G225400 Prunus persica HOM05D003561 ORTHO05D004351 1.0e-06 57.4 36 72.2
Actinidia12002 Actinidia chinensis HOM05D003561 ORTHO05D004351 1.3e-06 57.0 36 72.2
COL.COLO4_11519 Corchorus olitorius HOM05D003561 ORTHO05D004351 1.3e-06 57.0 36 72.2
FvH4_2g04670 Fragaria vesca HOM05D003561 ORTHO05D004351 1.3e-06 57.0 36 75.0
MD02G1180800 Malus domestica HOM05D003561 ORTHO05D004351 1.3e-06 57.0 36 69.4
Nitab4.5_0000284g0010 Nicotiana tabacum HOM05D003561 ORTHO05D004351 1.3e-06 57.0 36 72.2
SGA_v2.0_scaffold143G35782 Striga asiatica HOM05D003561 ORTHO05D004351 1.3e-06 57.0 36 72.2
Manes.13G115200 Manihot esculenta HOM05D003561 ORTHO05D004351 1.7e-06 56.6 38 65.8
RcHm_v2.0_Chr2g0107231 Rosa chinensis HOM05D003561 ORTHO05D004351 1.7e-06 56.6 36 72.2
SalBow6G0742 Salvia bowleyana HOM05D003561 ORTHO05D004351 1.7e-06 56.6 36 75.0
SalBow6G5634 Salvia bowleyana HOM05D003561 ORTHO05D004351 1.7e-06 56.6 36 75.0
GSVIVG01037885001 Vitis vinifera HOM05D003561 ORTHO05D004351 1.7e-06 56.6 36 72.2
CSS0044154 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 2.3e-06 56.2 36 69.4
AUR62038271 Chenopodium quinoa HOM05D003561 ORTHO05D004351 2.3e-06 56.2 36 72.2
FvH4_1g17060 Fragaria vesca HOM05D003561 ORTHO05D004351 2.3e-06 56.2 36 69.4
FAN19G0232 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.3e-06 56.2 36 69.4
FAN26G2049 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.3e-06 56.2 36 69.4
Gohir.A02G153700 Gossypium hirsutum HOM05D003561 ORTHO05D004351 2.3e-06 56.2 36 72.2
HanXRQChr14g0449611 Helianthus annuus HOM05D003561 ORTHO05D004351 2.3e-06 56.2 36 75.0
Lsat_1_v5_gn_2_83541 Lactuca sativa HOM05D003561 ORTHO05D004351 2.3e-06 56.2 36 75.0
Potri.007G051500 Populus trichocarpa HOM05D003561 ORTHO05D004351 2.3e-06 56.2 36 72.2
Solyc02g064800.3 Solanum lycopersicum HOM05D003561 ORTHO05D004351 2.3e-06 56.2 78 43.6
Sopen02g014910 Solanum pennellii HOM05D003561 ORTHO05D004351 2.3e-06 56.2 78 43.6
PGSC0003DMG400013016 Solanum tuberosum HOM05D003561 ORTHO05D004351 2.3e-06 56.2 78 43.6
DCAR_010841 Daucus carota HOM05D003561 ORTHO05D004351 3.0e-06 55.8 36 72.2
FAN24G1860 Fragaria x ananassa HOM05D003561 ORTHO05D004351 3.0e-06 55.8 36 75.0
Ah.03g146260 Amaranthus hybridus HOM05D003561 ORTHO05D004351 3.9e-06 55.5 36 69.4
FAN20G0240 Fragaria x ananassa HOM05D003561 ORTHO05D004351 3.9e-06 55.5 36 72.2
FAN27G2112 Fragaria x ananassa HOM05D003561 ORTHO05D004351 3.9e-06 55.5 36 72.2
Nitab4.5_0000604g0020 Nicotiana tabacum HOM05D003561 ORTHO05D004351 3.9e-06 55.5 36 72.2
SalBow1G5992 Salvia bowleyana HOM05D003561 ORTHO05D004351 3.9e-06 55.5 36 69.4
Cc02_g19520 Coffea canephora HOM05D003561 ORTHO05D004351 5.1e-06 55.1 36 69.4
Dinv15779 Davidia involucrata HOM05D003561 ORTHO05D004351 5.1e-06 55.1 36 72.2
ECA238G3157 Erigeron canadensis HOM05D003561 ORTHO05D004351 5.1e-06 55.1 36 69.4
TAR381G0090 Trochodendron aralioides HOM05D003561 ORTHO05D004351 5.1e-06 55.1 36 72.2
Cpa.g.sc3364.1 Carica papaya HOM05D003561 ORTHO05D004351 6.6e-06 54.7 36 69.4
SGA_v2.0_scaffold225G43001 Striga asiatica HOM05D003561 ORTHO05D004351 6.6e-06 54.7 36 72.2
TWI75G1561 Tripterygium wilfordii HOM05D003561 ORTHO05D004351 6.6e-06 54.7 36 72.2
Actinidia27978 Actinidia chinensis HOM05D003561 ORTHO05D004351 8.6e-06 54.3 36 69.4
Cfa004087 Carpinus fangiana HOM05D003561 ORTHO05D004351 8.6e-06 54.3 78 42.3
CiPaw.05G014100 Carya illinoinensis HOM05D003561 ORTHO05D004351 8.6e-06 54.3 36 69.4
FAN28G0575 Fragaria x ananassa HOM05D003561 ORTHO05D004351 8.6e-06 54.3 36 69.4


User provided reference genes

Program Settings