Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 1.1e-99 366.7 198 100.0
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 1.6e-45 186.8 199 57.8
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 6.1e-45 184.9 199 57.3
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 6.7e-44 181.4 199 55.8
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 7.4e-43 177.9 200 57.5
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 1.7e-42 176.8 197 54.3
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 1.3e-39 167.2 199 52.8
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 2.9e-39 166.0 199 52.3
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 3.8e-39 165.6 199 52.3
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 3.8e-39 165.6 198 51.5
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 5.0e-39 165.2 197 52.3
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 1.9e-38 163.3 199 51.3
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 9.4e-38 161.0 199 51.3
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 1.6e-37 160.2 199 51.3
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 6.1e-37 158.3 183 53.0
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 7.9e-37 157.9 198 49.5
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 3.0e-36 156.0 199 50.3
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 4.4e-35 152.1 200 50.0
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 4.4e-35 152.1 200 50.0
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 7.4e-35 151.4 199 47.7
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 9.7e-35 151.0 199 49.2
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 2.2e-34 149.8 189 48.7
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 2.8e-34 149.4 199 48.2
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 3.7e-34 149.1 199 48.7
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 3.7e-34 149.1 199 50.8
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 8.2e-34 147.9 199 47.7
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.4e-33 147.1 199 49.7
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 2.4e-33 146.4 185 48.6
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 5.3e-33 145.2 199 49.7
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 7.0e-33 144.8 200 47.0
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 2.6e-32 142.9 168 51.2
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 3.5e-32 142.5 194 47.9
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 1.0e-31 141.0 197 49.2
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 1.3e-31 140.6 199 46.2
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 1.3e-31 140.6 203 46.8
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 1.3e-31 140.6 200 45.0
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 2.9e-31 139.4 199 48.2
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 5.0e-31 138.7 180 48.9
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 8.5e-31 137.9 224 41.5
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 1.5e-30 137.1 172 50.6
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 1.5e-30 137.1 198 47.0
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 2.5e-30 136.3 187 48.1
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 9.4e-30 134.4 193 44.0
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 4.7e-29 132.1 184 46.7
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 4.7e-29 132.1 205 44.9
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 6.1e-29 131.7 198 44.4
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 1.0e-28 131.0 196 43.4
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 1.8e-28 130.2 172 45.9
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 2.3e-28 129.8 169 47.3
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 3.0e-28 129.4 182 45.1
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 4.0e-28 129.0 174 46.6
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 5.2e-28 128.6 206 43.7
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 1.5e-27 127.1 206 43.7
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 2.6e-27 126.3 200 44.0
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 4.4e-27 125.6 206 43.2
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 5.7e-27 125.2 198 43.4
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 7.5e-27 124.8 192 42.2
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 9.7e-27 124.4 192 42.2
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 1.3e-26 124.0 193 44.0
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 2.2e-26 123.2 193 44.0
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 2.2e-26 123.2 193 44.0
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 2.2e-26 123.2 199 42.2
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 2.8e-26 122.9 199 40.2
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 2.8e-26 122.9 203 42.9
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 3.7e-26 122.5 193 43.5
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 4.8e-26 122.1 193 43.5
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 6.3e-26 121.7 193 44.0
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 1.1e-25 120.9 199 42.2
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 1.1e-25 120.9 192 41.7
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 9.1e-25 117.9 192 41.1
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 9.1e-25 117.9 199 43.2
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.2e-24 117.5 203 42.9
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 1.2e-24 117.5 117 57.3
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 2.0e-24 116.7 199 41.7
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 3.5e-24 115.9 199 42.7
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 3.5e-24 115.9 198 40.9
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 1.7e-23 113.6 193 42.5
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 2.9e-23 112.8 199 41.2
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 3.8e-23 112.5 174 45.4
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 1.1e-22 110.9 118 53.4
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 1.5e-22 110.5 165 43.6
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 2.5e-22 109.8 200 41.0
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 4.2e-22 109.0 110 54.5
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 1.2e-21 107.5 189 39.2
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 1.6e-21 107.1 192 40.1
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 2.1e-21 106.7 174 41.4
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 2.1e-21 106.7 212 38.2
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 8.0e-21 104.8 191 39.8
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 1.8e-20 103.6 197 39.1
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 3.0e-20 102.8 167 43.1
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 4.0e-20 102.4 138 50.0
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 2.6e-19 99.8 119 49.6
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 2.6e-19 99.8 108 51.9
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 7.5e-19 98.2 131 46.6
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.3e-18 97.4 171 39.8
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 1.3e-18 97.4 108 50.9
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 1.7e-18 97.1 190 37.9
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 3.7e-18 95.9 95 52.6
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 6.3e-18 95.1 200 36.5
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 6.3e-18 95.1 200 36.5
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 6.3e-18 95.1 204 36.8
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 1.4e-17 94.0 133 41.4
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 1.4e-17 94.0 95 51.6
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 3.1e-17 92.8 177 39.0
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 5.4e-17 92.0 188 36.2
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 3.5e-16 89.4 116 46.6
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 1.3e-15 87.4 113 47.8
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 3.8e-15 85.9 206 36.4
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 8.5e-15 84.7 112 45.5
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 1.5e-14 84.0 94 57.4
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 1.9e-14 83.6 184 37.5
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 1.9e-14 83.6 100 49.0
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 3.2e-14 82.8 84 58.3
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 3.2e-14 82.8 118 50.0
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 2.1e-13 80.1 94 50.0
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 2.7e-13 79.7 78 53.8
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 4.7e-13 79.0 75 58.7
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 4.7e-13 79.0 77 57.1
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 5.2e-12 75.5 129 45.7
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 2.6e-11 73.2 120 45.8
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 9.8e-11 71.2 105 50.5
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 3.7e-10 69.3 119 43.7
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 4.9e-10 68.9 198 31.3
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 1.1e-09 67.8 61 54.1
ClCG01G025500 Citrullus lanatus HOM05D005827 ORTHO05D005864 3.1e-09 66.2 108 44.4
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 3.1e-09 66.2 89 41.6
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 1.2e-08 64.3 90 42.2
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 4.5e-08 62.4 121 38.8
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 2.9e-07 59.7 84 44.0
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 1.9e-06 57.0 105 38.1


User provided reference genes

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