Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 9.7e-245 849.7 438 100.0
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.3e-169 600.1 417 73.1
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 3.6e-167 592.0 416 70.9
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 8.4e-164 580.9 432 68.8
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.9e-163 579.7 370 75.7
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 9.3e-163 577.4 387 72.9
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.2e-162 577.0 368 74.7
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 2.1e-162 576.2 387 72.4
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 6.0e-162 574.7 387 72.6
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 7.9e-162 574.3 374 73.8
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 1.0e-161 573.9 404 71.8
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 3.9e-161 572.0 362 74.3
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.1e-160 570.5 414 69.3
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.3e-159 567.0 410 70.0
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 1.8e-158 563.1 378 71.7
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 1.8e-158 563.1 369 73.4
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 2.4e-158 562.8 381 70.9
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 3.1e-158 562.4 424 67.9
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 2.6e-157 559.3 406 68.2
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 5.8e-157 558.1 368 72.0
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 2.2e-156 556.2 404 68.8
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 2.2e-156 556.2 404 68.1
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 2.2e-156 556.2 417 68.1
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 3.8e-156 555.4 387 70.0
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 3.8e-156 555.4 404 68.6
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.8e-156 555.4 405 67.9
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.1e-155 553.9 384 71.1
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 4.2e-155 552.0 401 69.1
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 5.5e-155 551.6 371 70.9
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 7.1e-155 551.2 419 65.9
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 9.3e-155 550.8 407 67.6
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 2.1e-154 549.7 373 71.8
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 3.5e-154 548.9 367 73.0
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 4.6e-154 548.5 417 66.7
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 6.0e-154 548.1 369 72.1
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.0e-153 547.4 405 67.4
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.8e-153 546.6 407 67.1
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 1.8e-153 546.6 414 65.9
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.3e-153 546.2 386 69.7
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 3.0e-153 545.8 366 72.7
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 6.7e-153 544.7 424 65.6
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 8.7e-153 544.3 422 65.2
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.1e-152 543.9 406 67.2
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 7.4e-152 541.2 422 65.6
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.6e-151 540.0 370 70.8
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 2.8e-151 539.3 389 69.7
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 3.7e-151 538.9 420 64.5
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 1.1e-150 537.3 400 67.2
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.1e-150 535.8 421 64.8
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 5.3e-150 535.0 364 71.7
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 6.9e-150 534.6 455 63.1
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 1.5e-149 533.5 384 68.5
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 3.4e-149 532.3 407 66.1
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 5.8e-149 531.6 416 64.9
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 2.2e-148 529.6 384 68.2
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 1.4e-147 526.9 394 66.5
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 1.9e-147 526.6 347 72.6
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 1.6e-146 523.5 382 67.8
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 3.5e-146 522.3 382 67.5
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 4.6e-146 521.9 349 72.8
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 6.1e-146 521.5 415 63.9
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 2.3e-145 519.6 420 64.5
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 3.9e-145 518.8 365 69.0
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 5.1e-145 518.5 412 64.8
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 5.7e-144 515.0 417 63.3
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 1.3e-143 513.8 399 64.9
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 8.2e-143 511.1 379 66.8
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 8.2e-143 511.1 353 70.3
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.0e-140 504.2 422 64.2
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.3e-140 503.8 359 67.1
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.5e-139 499.6 350 71.4
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 7.9e-138 494.6 409 61.9
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.4e-137 493.8 362 67.1
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 6.7e-137 491.5 355 69.6
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 1.5e-136 490.3 384 65.4
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 2.5e-136 489.6 482 54.8
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 9.7e-136 487.6 407 59.0
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.3e-135 487.3 364 65.7
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.7e-135 485.7 384 65.4
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 6.1e-130 468.4 399 58.6
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.0e-125 453.4 360 60.6
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 3.5e-125 452.6 343 67.6
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 9.7e-120 434.5 386 58.3
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 1.1e-115 421.0 420 55.0
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.2e-114 417.5 347 58.2
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 8.3e-111 404.8 362 53.6
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 3.6e-106 389.4 377 57.3
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.6e-101 374.0 386 54.4
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.7e-100 370.5 357 51.0
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 8.0e-98 361.7 340 53.2
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-94 350.5 394 47.5
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 5.6e-91 339.0 270 63.3
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 2.1e-90 337.0 258 65.1
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 5.8e-88 328.9 299 56.2
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 3.5e-77 293.1 320 50.3
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.3e-63 248.1 356 43.5
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 2.2e-63 247.3 375 38.1
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 6.0e-53 212.6 125 79.2
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 8.7e-52 208.8 133 74.4
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.1e-45 187.6 178 59.0
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 2.6e-40 170.6 133 63.9
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 4.9e-39 166.4 108 73.1
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 1.1e-25 122.1 150 48.7
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 1.4e-25 121.7 112 52.7
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 3.1e-25 120.6 125 51.2
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 6.9e-25 119.4 79 64.6
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.3e-23 115.2 168 40.5
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 4.3e-19 100.1 99 53.5
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 6.3e-18 96.3 376 26.9
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.1e-17 95.5 76 63.2
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.0e-15 89.0 224 30.8
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 5.0e-15 86.7 97 49.5
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 4.2e-14 83.6 59 69.5
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 3.6e-13 80.5 179 33.0
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.6e-13 80.5 87 54.0
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 7.9e-13 79.3 55 69.1
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 3.2e-06 57.4 32 71.9


User provided reference genes

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