Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 1.9e-133 479.2 242 100.0
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 5.0e-118 427.9 239 88.7
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 6.8e-115 417.5 234 88.5
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.5e-114 416.4 235 87.7
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 3.4e-114 415.2 231 88.3
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 3.4e-114 415.2 237 86.5
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 7.5e-114 414.1 241 85.9
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 1.7e-113 412.9 244 84.8
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.9e-113 412.1 232 87.1
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 6.4e-113 411.0 241 85.1
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 4.1e-112 408.3 231 87.4
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 4.1e-112 408.3 233 88.0
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 5.4e-112 407.9 233 87.6
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 7.0e-112 407.5 235 85.5
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 9.2e-112 407.1 241 83.4
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 2.7e-111 405.6 234 85.5
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 3.5e-111 405.2 231 86.6
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 7.8e-111 404.1 239 84.1
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 1.0e-110 403.7 233 85.8
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 1.7e-110 402.9 251 81.7
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.1e-109 400.2 234 84.6
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 1.1e-109 400.2 237 82.7
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 3.3e-109 398.7 229 87.8
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 3.3e-109 398.7 239 82.4
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 4.3e-109 398.3 232 85.3
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 4.3e-109 398.3 239 82.4
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 5.6e-109 397.9 234 84.6
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 7.3e-109 397.5 239 82.8
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 7.3e-109 397.5 233 85.4
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 7.3e-109 397.5 238 82.8
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 9.5e-109 397.1 239 82.0
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 9.5e-109 397.1 232 85.3
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 2.1e-108 396.0 233 83.7
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 6.2e-108 394.4 234 84.6
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 6.2e-108 394.4 229 84.7
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 1.1e-107 393.7 237 82.7
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 2.3e-107 392.5 220 88.2
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 3.1e-107 392.1 235 83.4
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 1.2e-106 390.2 241 81.3
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 4.4e-106 388.3 238 82.8
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 5.8e-106 387.9 234 83.3
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 9.8e-106 387.1 220 86.4
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 2.9e-105 385.6 240 80.8
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 6.4e-105 384.4 234 82.5
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 8.3e-105 384.0 236 83.1
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.4e-104 383.3 223 84.3
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.4e-104 383.3 223 84.3
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 1.9e-104 382.9 245 79.6
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 1.9e-104 382.9 245 79.6
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 1.9e-104 382.9 228 85.5
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 7.1e-104 380.9 241 80.9
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.1e-103 379.4 241 80.5
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 3.5e-103 378.6 248 80.2
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 1.3e-102 376.7 233 81.5
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 1.3e-102 376.7 239 78.7
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 1.7e-102 376.3 215 88.4
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 3.9e-102 375.2 240 79.2
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 3.6e-100 368.6 241 79.3
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.0e-99 365.2 236 80.5
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 4.0e-99 365.2 236 80.5
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 6.8e-99 364.4 230 80.0
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 2.6e-98 362.5 230 77.4
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 7.6e-98 360.9 254 73.6
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 8.3e-97 357.5 243 77.0
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 2.7e-95 352.4 205 85.9
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 6.0e-95 351.3 228 78.9
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.0e-94 350.5 227 79.3
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 1.6e-92 343.2 231 74.0
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 4.7e-92 341.7 230 71.7
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 6.2e-92 341.3 229 72.1
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.4e-91 340.1 233 74.2
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 2.6e-90 335.9 198 84.3
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.7e-89 333.2 226 73.5
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 3.8e-89 332.0 232 73.7
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 3.8e-89 332.0 249 72.3
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 4.9e-89 331.6 203 81.3
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 6.4e-89 331.3 236 70.3
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 2.4e-88 329.3 249 73.1
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 2.7e-87 325.9 232 69.4
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 3.5e-87 325.5 227 73.6
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 2.3e-86 322.8 181 88.4
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 1.1e-85 320.5 199 82.4
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 1.4e-83 313.5 237 69.2
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.8e-83 313.2 228 72.8
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 2.2e-73 279.6 252 60.7
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 7.9e-71 271.2 220 66.8
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.0e-70 270.8 229 62.0
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 2.9e-65 252.7 135 91.9
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 1.1e-64 250.8 139 89.9
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 2.1e-60 236.5 219 53.0
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.8e-60 235.3 165 74.5
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 6.5e-57 224.9 150 74.0
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 9.3e-56 221.1 228 51.3
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 3.9e-54 215.7 241 50.6
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 3.0e-30 136.3 82 78.0
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 7.0e-27 125.2 222 34.2
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 2.0e-18 97.1 123 51.2
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 1.1e-11 74.7 57 66.7


User provided reference genes

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