Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 1.8e-28 128.6 70 100.0
Lj9C161T2 Lonicera japonica HOM05D002866 ORTHO05D234048 5.3e-20 100.5 70 84.3
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 2.5e-09 65.1 116 39.7
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 2.1e-08 62.0 107 41.1
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 2.7e-08 61.6 39 82.1
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.4e-07 59.3 107 40.2
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 1.4e-07 59.3 116 37.1
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.8e-07 58.9 41 75.6
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 2.3e-07 58.5 120 35.0
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 3.0e-07 58.2 116 36.2
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 4.0e-07 57.8 41 73.2
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 4.0e-07 57.8 115 36.5
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 5.2e-07 57.4 41 73.2
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 5.2e-07 57.4 41 73.2
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 5.2e-07 57.4 41 73.2
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 5.2e-07 57.4 41 75.6
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.5e-06 55.8 40 72.5
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.5e-06 55.8 116 34.5
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 1.5e-06 55.8 41 73.2
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 1.5e-06 55.8 41 73.2
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 2.0e-06 55.5 106 36.8
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 2.0e-06 55.5 41 70.7
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 2.0e-06 55.5 41 70.7
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 2.0e-06 55.5 116 33.6
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 2.6e-06 55.1 41 68.3
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 3.3e-06 54.7 41 70.7
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 4.4e-06 54.3 67 52.2
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 4.4e-06 54.3 39 74.4
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 4.4e-06 54.3 39 74.4
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 4.4e-06 54.3 120 33.3
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 5.7e-06 53.9 41 68.3
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 5.7e-06 53.9 67 53.7
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 5.7e-06 53.9 120 33.3
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 7.5e-06 53.5 66 51.5
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 7.5e-06 53.5 116 36.2
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 9.7e-06 53.1 66 51.5
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 9.7e-06 53.1 41 68.3


User provided reference genes

Program Settings