Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 8.8e-259 897.1 725 100.0
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.9e-100 370.5 727 49.7
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 4.1e-99 366.7 725 48.3
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 7.8e-98 362.5 724 53.5
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 5.0e-97 359.8 724 46.3
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.2e-95 355.1 727 51.9
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.6e-95 354.8 727 49.8
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 1.3e-89 335.1 728 48.2
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 7.3e-88 329.3 728 47.4
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 8.1e-87 325.9 719 53.5
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 2.3e-86 324.3 728 54.7
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 5.4e-83 313.2 724 53.5
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.6e-82 311.6 725 48.1
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 7.8e-82 309.3 725 53.8
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 7.8e-82 309.3 725 45.5
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 3.6e-79 300.4 729 54.2
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 8.1e-79 299.3 723 50.2
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.4e-78 297.7 725 47.6
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 1.5e-77 295.0 725 47.6
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 3.4e-77 293.9 720 44.0
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 5.8e-77 293.1 728 55.6
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.2e-76 291.2 728 57.3
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 2.2e-76 291.2 741 50.5
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 2.4e-75 287.7 725 48.4
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 4.2e-75 287.0 737 37.4
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 7.1e-75 286.2 726 46.1
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.2e-74 285.4 729 51.6
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 4.3e-72 276.9 725 47.2
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 1.3e-71 275.4 728 46.6
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.6e-71 275.0 726 53.0
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.8e-71 274.2 724 45.7
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 2.8e-71 274.2 728 49.2
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 4.8e-71 273.5 725 53.1
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 6.9e-70 269.6 723 45.8
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 1.5e-69 268.5 727 42.9
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 7.6e-69 266.2 723 47.9
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 1.3e-68 265.4 733 52.7
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 3.8e-68 263.8 729 48.4
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 2.4e-67 261.2 720 49.0
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 8.7e-65 252.7 733 48.6
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 1.5e-64 251.9 726 46.0
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 1.9e-64 251.5 726 49.6
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 1.3e-63 248.8 725 50.3
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 1.3e-63 248.8 730 44.4
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 2.8e-63 247.7 722 48.1
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 1.8e-62 245.0 476 48.3
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 3.1e-62 244.2 729 43.5
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 3.1e-62 244.2 727 45.1
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 1.3e-60 238.8 467 51.8
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 2.9e-60 237.7 728 42.7
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 3.8e-60 237.3 472 51.9
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 6.4e-60 236.5 726 43.1
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 1.1e-59 235.7 467 51.4
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 1.1e-59 235.7 467 51.4
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.4e-59 235.3 733 48.7
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 3.2e-59 234.2 725 47.9
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 2.1e-58 231.5 732 47.4
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 2.7e-58 231.1 730 47.9
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 6.7e-57 226.5 727 48.7
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 8.7e-57 226.1 456 46.5
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 1.1e-56 225.7 728 45.6
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 1.5e-56 225.3 722 44.6
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 9.6e-56 222.6 737 40.4
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 2.1e-55 221.5 726 47.8
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 1.8e-54 218.4 721 46.0
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 4.5e-53 213.8 727 46.4
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 3.8e-52 210.7 726 42.3
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 3.2e-51 207.6 721 47.7
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 2.7e-50 204.5 736 42.3
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 6.7e-49 199.9 724 45.3
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.5e-48 198.7 448 47.5
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 1.3e-47 195.7 560 43.9
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 2.8e-47 194.5 736 43.8
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 1.1e-46 192.6 415 47.7
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.4e-46 192.2 724 45.0
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 1.8e-46 191.8 725 42.2
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 2.4e-46 191.4 729 41.3
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 9.0e-46 189.5 723 44.5
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 2.9e-44 184.5 727 46.4
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 5.0e-44 183.7 729 46.5
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 5.0e-44 183.7 471 45.0
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 4.2e-43 180.6 734 42.2
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 2.1e-42 178.3 725 44.3
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 6.1e-42 176.8 729 41.7
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 3.9e-41 174.1 722 42.1
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 1.1e-40 172.6 682 42.4
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 9.7e-40 169.5 729 42.2
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 4.1e-38 164.1 738 46.1
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 9.0e-38 162.9 741 40.8
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 1.7e-36 158.7 730 44.1
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 5.0e-36 157.1 335 63.6
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 3.2e-35 154.5 718 44.0
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 5.5e-35 153.7 686 48.8
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 7.2e-35 153.3 725 38.1
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 1.0e-33 149.4 250 41.6
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 1.4e-33 149.1 187 63.6
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 3.9e-33 147.5 213 44.6
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 8.8e-33 146.4 727 39.5
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 3.7e-31 141.0 715 45.6
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 4.1e-30 137.5 727 44.2
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 5.1e-25 120.6 725 40.4
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 1.3e-20 105.9 721 39.7
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 8.0e-18 96.7 307 39.1
CDE07G0223 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 2.8e-15 88.2 204 31.4
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 1.1e-14 86.3 280 30.7
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.4e-14 85.9 452 28.1
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 7.0e-14 83.6 104 51.9
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 8.5e-12 76.6 107 47.7
PSO170G1391 Papaver somniferum HOM05D006421 ORTHO05D008268 8.5e-12 76.6 152 35.5
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 8.5e-12 76.6 410 38.3
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.5e-11 75.1 83 57.8
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.2e-11 74.7 252 46.0
CDE06G1662 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 6.8e-09 67.0 70 48.6
A03p32460 Brassica napus HOM05D003015 ORTHO05D024548 8.8e-09 66.6 126 43.7
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 8.8e-09 66.6 725 42.9
BraA07t31256Z Brassica rapa HOM05D000793 ORTHO05D024548 1.5e-08 65.9 121 45.5
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 2.8e-07 61.6 105 42.9


User provided reference genes

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