Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P589T28 Lonicera japonica HOM05D004021 ORTHO05D003767 5.5e-209 730.7 370 100.0
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 1.9e-164 582.8 360 84.4
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 3.5e-70 269.6 378 44.7
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 3.5e-62 243.0 376 43.1
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 1.6e-35 154.5 375 34.4
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 4.2e-31 139.8 378 32.0
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 1.3e-27 128.3 372 32.8
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 1.6e-27 127.9 365 32.9
vmacro05366 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 1.0e-24 118.6 370 32.4
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 3.8e-24 116.7 372 31.5
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 3.2e-23 113.6 370 31.9
Duzib168G2343 Durio zibethinus HOM05D004021 ORTHO05D003767 1.6e-22 111.3 371 29.6
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 2.6e-17 94.0 371 27.2
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 5.9e-17 92.8 365 27.1
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 1.0e-16 92.0 366 27.3
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 1.7e-16 91.3 384 28.4
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 2.9e-16 90.5 366 27.3
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 2.5e-15 87.4 374 27.3
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 1.6e-14 84.7 371 26.7
Cpa.g.sc7.255 Carica papaya HOM05D004021 ORTHO05D003767 3.6e-14 83.6 384 26.8
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 2.3e-13 80.9 377 26.8
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 3.0e-13 80.5 370 27.3
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 2.0e-12 77.8 331 29.0
TAR626G1566 Trochodendron aralioides HOM05D004021 ORTHO05D003767 2.5e-12 77.4 303 27.7
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 5.7e-12 76.3 378 24.1
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 9.7e-12 75.5 365 24.1
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.7e-11 74.7 359 23.7
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 1.7e-11 74.7 350 24.3
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 2.8e-11 73.9 324 28.7
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 4.1e-10 70.1 383 26.6
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 2.2e-08 64.3 369 23.0
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 6.5e-08 62.8 368 26.4
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 8.5e-08 62.4 365 21.6
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 3.2e-07 60.5 365 21.6
FAN05G2999 Fragaria x ananassa HOM05D004021 ORTHO05D003767 2.1e-06 57.8 290 25.2


User provided reference genes

Program Settings