Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P558T21 Lonicera japonica HOM05D012621 ORTHO05D004349 2.9e-107 392.1 207 100.0
Lj8P558T23 Lonicera japonica HOM05D012621 ORTHO05D004349 9.9e-71 270.8 207 74.9
Lj8P558T14 Lonicera japonica HOM05D012621 ORTHO05D004349 1.1e-69 267.3 207 73.9
Lj8P558T18 Lonicera japonica HOM05D012621 ORTHO05D004349 1.2e-63 247.3 207 71.0
Lj8A559T40 Lonicera japonica HOM05D012621 ORTHO05D004349 6.2e-57 224.9 190 72.1
Lj9C255T10 Lonicera japonica HOM05D012621 ORTHO05D004349 3.4e-55 219.2 207 67.6
Lj9C256T7 Lonicera japonica HOM05D012621 ORTHO05D004349 4.3e-50 202.2 208 62.0
Lj9C256T10 Lonicera japonica HOM05D012621 ORTHO05D004349 4.8e-49 198.7 159 71.7
Lj9P256T19 Lonicera japonica HOM05D012621 ORTHO05D004349 2.4e-40 169.9 138 70.3
Lj9C256T9 Lonicera japonica HOM05D012621 ORTHO05D004349 8.2e-33 144.8 120 73.3
Lj9C256T8 Lonicera japonica HOM05D012621 ORTHO05D004349 7.2e-21 105.1 172 45.9
Lsat_1_v5_gn_3_140940 Lactuca sativa HOM05D004242 ORTHO05D004349 2.1e-12 77.0 119 42.9
Oeu042952.1 Olea europaea HOM05D004242 ORTHO05D004349 1.2e-10 71.2 236 33.1
Dinv34239 Davidia involucrata HOM05D004242 ORTHO05D004349 1.5e-10 70.9 217 34.6
Potri.002G175400 Populus trichocarpa HOM05D004242 ORTHO05D004349 1.5e-10 70.9 121 39.7
Hma1.2p1_0309F.1_g120440 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 2.6e-10 70.1 273 29.7
SGA_v2.0_scaffold98G29435 Striga asiatica HOM05D004242 ORTHO05D004349 2.6e-10 70.1 144 38.2
Oeu004972.1 Olea europaea HOM05D004242 ORTHO05D004349 3.3e-10 69.7 240 31.7
Lsat_1_v5_gn_8_20301 Lactuca sativa HOM05D004242 ORTHO05D004349 5.7e-10 68.9 195 33.3
Duzib138G0794 Durio zibethinus HOM05D004242 ORTHO05D004349 9.7e-10 68.2 127 37.0
CiPaw.02G043200 Carya illinoinensis HOM05D004242 ORTHO05D004349 1.3e-09 67.8 121 38.0
Gohir.D11G103800 Gossypium hirsutum HOM05D004242 ORTHO05D004349 1.7e-09 67.4 118 41.5
Gorai.007G111100 Gossypium raimondii HOM05D004242 ORTHO05D004349 1.7e-09 67.4 118 41.5
Actinidia25370 Actinidia chinensis HOM05D004242 ORTHO05D004349 2.2e-09 67.0 237 31.2
Gohir.D07G140400 Gossypium hirsutum HOM05D004242 ORTHO05D004349 2.2e-09 67.0 104 43.3
Gorai.001G152400 Gossypium raimondii HOM05D004242 ORTHO05D004349 2.2e-09 67.0 104 43.3
Lj9P602T20 Lonicera japonica HOM05D004242 ORTHO05D004349 2.2e-09 67.0 201 34.8
Potri.014G102466 Populus trichocarpa HOM05D004242 ORTHO05D004349 2.8e-09 66.6 124 36.3
QL08p046281 Quercus lobata HOM05D004242 ORTHO05D004349 2.8e-09 66.6 127 37.8
Gohir.A07G135500 Gossypium hirsutum HOM05D004242 ORTHO05D004349 3.7e-09 66.2 104 43.3
Gohir.A11G099300 Gossypium hirsutum HOM05D004242 ORTHO05D004349 4.8e-09 65.9 117 38.5
DCAR_020977 Daucus carota HOM05D006278 ORTHO05D007526 6.3e-09 65.5 82 45.1
Manes.01G267100 Manihot esculenta HOM05D004242 ORTHO05D004349 6.3e-09 65.5 128 35.9
PGR031G2923 Punica granatum HOM05D004242 ORTHO05D004349 1.1e-08 64.7 118 36.4
AUR62022719 Chenopodium quinoa HOM05D004242 ORTHO05D004349 1.4e-08 64.3 113 38.9
Manes.05G019100 Manihot esculenta HOM05D004242 ORTHO05D004349 1.4e-08 64.3 107 40.2
TWI14G0118 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 1.4e-08 64.3 128 35.2
AUR62004535 Chenopodium quinoa HOM05D004242 ORTHO05D004349 2.4e-08 63.5 113 38.1
Eucgr.D02643 Eucalyptus grandis HOM05D004242 ORTHO05D004349 2.4e-08 63.5 129 37.2
FvH4_7g17260 Fragaria vesca HOM05D004242 ORTHO05D004349 3.1e-08 63.2 89 46.1
FAN06G4791 Fragaria x ananassa HOM05D004242 ORTHO05D004349 3.1e-08 63.2 89 46.1
Medtr7g117980 Medicago truncatula HOM05D004242 ORTHO05D004349 3.1e-08 63.2 119 38.7
Medtr8g027290 Medicago truncatula HOM05D004242 ORTHO05D004349 5.3e-08 62.4 143 32.9
CSS0040523 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 7.0e-08 62.0 180 29.4
FAN06G2582 Fragaria x ananassa HOM05D004242 ORTHO05D004349 7.0e-08 62.0 108 39.8
ECA240G3602 Erigeron canadensis HOM05D004242 ORTHO05D004349 1.2e-07 61.2 209 29.2
VMungo0540G1056 Vigna mungo HOM05D004242 ORTHO05D004349 1.2e-07 61.2 251 30.7
EL10Ac1g00218 Beta vulgaris HOM05D004242 ORTHO05D004349 1.6e-07 60.8 115 39.1
arahy.Tifrunner.gnm1.ann1.16GZH2 Arachis hypogaea HOM05D004242 ORTHO05D004349 2.0e-07 60.5 119 37.8
Sed0017381 Sechium edule HOM05D004242 ORTHO05D004349 2.0e-07 60.5 226 30.5
PSO210G2709 Papaver somniferum HOM05D004242 ORTHO05D004349 2.7e-07 60.1 117 36.8
CAN.G211.7 Capsicum annuum HOM05D004242 ORTHO05D004349 3.5e-07 59.7 227 30.8
FAN03G1939 Fragaria x ananassa HOM05D004242 ORTHO05D004349 3.5e-07 59.7 89 43.8
arahy.Tifrunner.gnm1.ann1.1EJ222 Arachis hypogaea HOM05D004242 ORTHO05D004349 4.5e-07 59.3 119 37.8
CSS0005133 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 4.5e-07 59.3 248 28.6
CSS0009998 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 4.5e-07 59.3 248 28.6
PSO761G0055 Papaver somniferum HOM05D004242 ORTHO05D004349 4.5e-07 59.3 117 37.6
TPR.G4684 Trifolium pratense HOM05D004242 ORTHO05D004349 4.5e-07 59.3 121 35.5
Dinv18906 Davidia involucrata HOM05D004242 ORTHO05D004349 5.9e-07 58.9 159 35.2
Hma1.2p1_0180F.1_g079790 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 5.9e-07 58.9 186 31.7
GSVIVG01027401001 Vitis vinifera HOM05D004242 ORTHO05D004349 5.9e-07 58.9 210 31.4
RcHm_v2.0_Chr3g0484701 Rosa chinensis HOM05D004242 ORTHO05D004349 7.7e-07 58.5 138 37.0
TAR339G0002 Trochodendron aralioides HOM05D004242 ORTHO05D004349 7.7e-07 58.5 284 27.5
Nitab4.5_0000508g0190 Nicotiana tabacum HOM05D004242 ORTHO05D004349 1.0e-06 58.2 273 30.0
Rhsim07G0001600 Rhododendron simsii HOM05D004242 ORTHO05D004349 1.0e-06 58.2 293 28.0
FAN10G0542 Fragaria x ananassa HOM05D004242 ORTHO05D004349 1.3e-06 57.8 47 63.8
FAN17G2081 Fragaria x ananassa HOM05D004242 ORTHO05D004349 1.3e-06 57.8 47 63.8
FAN22G2040 Fragaria x ananassa HOM05D004242 ORTHO05D004349 1.3e-06 57.8 47 63.8
Glyma.19G258400 Glycine max HOM05D004242 ORTHO05D004349 1.3e-06 57.8 226 30.5
Peaxi162Scf00014g00294 Petunia axillaris HOM05D004242 ORTHO05D004349 1.3e-06 57.8 223 31.8
Cfa003761 Carpinus fangiana HOM05D004242 ORTHO05D004349 1.7e-06 57.4 126 31.7
PGSC0003DMG400007374 Solanum tuberosum HOM05D004242 ORTHO05D004349 1.7e-06 57.4 220 29.5
Ca_09531_v3 Cicer arietinum L. HOM05D004242 ORTHO05D004349 2.2e-06 57.0 117 35.9
FAN10G1700 Fragaria x ananassa HOM05D004242 ORTHO05D004349 2.2e-06 57.0 47 61.7
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 2.2e-06 57.0 127 34.6
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 2.9e-06 56.6 100 41.0
Solyc08g067370.1 Solanum lycopersicum HOM05D004242 ORTHO05D004349 3.8e-06 56.2 227 29.5
Aa31LG1G28030 Aethionema arabicum HOM05D004242 ORTHO05D004349 5.0e-06 55.8 225 30.2
FvH4_4g01200 Fragaria vesca HOM05D004242 ORTHO05D004349 5.0e-06 55.8 47 61.7
FAN12G0333 Fragaria x ananassa HOM05D004242 ORTHO05D004349 5.0e-06 55.8 47 61.7
Sc12g0010690 Simmondsia chinensis HOM05D005336 ORTHO05D006511 5.0e-06 55.8 83 34.9
Haze_15699 Corylus avellana HOM05D004242 ORTHO05D004349 6.5e-06 55.5 118 33.1
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 6.5e-06 55.5 113 35.4
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 6.5e-06 55.5 103 37.9
Lalb_Chr10g0100731 Lupinus albus HOM05D004242 ORTHO05D004349 6.5e-06 55.5 178 29.2
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 6.5e-06 55.5 104 37.5
SEGI_39402 Sequoiadendron giganteum HOM05D005336 ORTHO05D006511 6.5e-06 55.5 78 43.6
Thecc.01G336900 Theobroma cacao HOM05D004242 ORTHO05D004349 6.5e-06 55.5 223 28.7
MELO3C022249.2 Cucumis melo HOM05D004242 ORTHO05D004349 8.5e-06 55.1 97 35.1
Nitab4.5_0005697g0010 Nicotiana tabacum HOM05D004242 ORTHO05D004349 8.5e-06 55.1 220 30.0
Sopen08g021310 Solanum pennellii HOM05D004242 ORTHO05D004349 8.5e-06 55.1 227 29.1
Thecc.03G215000 Theobroma cacao HOM05D005336 ORTHO05D006511 8.5e-06 55.1 84 41.7


User provided reference genes

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