Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P534T7 Lonicera japonica HOM05D011560 ORTHO05D000012 2.4e-95 352.1 168 100.0
Lj5P791T15 Lonicera japonica HOM05D011560 ORTHO05D000012 4.5e-65 251.5 156 78.2
Lj5P824T16 Lonicera japonica HOM05D011560 ORTHO05D000012 7.2e-55 217.6 122 81.1
Lj5A791G16 Lonicera japonica HOM05D011560 ORTHO05D000012 3.0e-53 212.2 119 80.7
Lj5A790T7 Lonicera japonica HOM05D011560 ORTHO05D000012 3.2e-47 192.2 123 69.1
Lj5C825T1 Lonicera japonica HOM05D011560 ORTHO05D000012 4.7e-46 188.3 123 69.9
Lj5C789T4 Lonicera japonica HOM05D011560 ORTHO05D000012 5.1e-45 184.9 123 68.3
Lj2C634G4 Lonicera japonica HOM05D011560 ORTHO05D000012 2.6e-41 172.6 124 62.9
Lj5P824T20 Lonicera japonica HOM05D011560 ORTHO05D000012 6.5e-40 167.9 106 69.8
Lj5P787T11 Lonicera japonica HOM05D011560 ORTHO05D000012 2.7e-38 162.5 122 63.9
Lj5P824T21 Lonicera japonica HOM05D011560 ORTHO05D000012 9.7e-36 154.1 104 68.3
Actinidia02390 Actinidia chinensis HOM05D000005 ORTHO05D000012 1.2e-22 110.5 117 48.7
Lj5A794T35 Lonicera japonica HOM05D011560 ORTHO05D000012 1.2e-20 104.0 127 42.5
Lj5P787T15 Lonicera japonica HOM05D011560 ORTHO05D000012 1.2e-20 104.0 132 40.2
vmacro01858 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 2.8e-19 99.4 115 48.7
vmacro01859 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 3.1e-18 95.9 120 41.7
Lj5P794T32 Lonicera japonica HOM05D011560 ORTHO05D000012 3.5e-17 92.4 77 51.9
vmacro01857 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 1.0e-16 90.9 111 45.9
Dinv38455 Davidia involucrata HOM05D000005 ORTHO05D000012 1.8e-13 80.1 146 32.9
Dinv38457 Davidia involucrata HOM05D010983 ORTHO05D000012 1.2e-09 67.4 130 30.8
Potri.007G099700 Populus trichocarpa HOM05D000005 ORTHO05D000012 3.5e-09 65.9 131 29.8
Dinv38459 Davidia involucrata HOM05D000005 ORTHO05D000012 1.3e-08 63.9 110 32.7
FvH4_7g10750 Fragaria vesca HOM05D000005 ORTHO05D000012 1.7e-08 63.5 132 33.3
FAN06G2906 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.7e-08 63.5 132 33.3
Dinv38449 Davidia involucrata HOM05D000005 ORTHO05D000012 3.9e-08 62.4 106 34.0
CSS0009639 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 5.0e-08 62.0 140 32.9
Dinv29649 Davidia involucrata HOM05D000005 ORTHO05D000012 5.0e-08 62.0 107 34.6
MD07G1079200 Malus domestica HOM05D000005 ORTHO05D000012 6.6e-08 61.6 139 28.8
MD05G1140100 Malus domestica HOM05D000005 ORTHO05D000012 8.6e-08 61.2 117 30.8
Cpa.g.sc4.91 Carica papaya HOM05D000005 ORTHO05D000012 1.9e-07 60.1 117 29.1
FAN03G1873 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.9e-07 60.1 102 34.3
Cpa.g.sc4.82 Carica papaya HOM05D000005 ORTHO05D000012 7.3e-07 58.2 112 30.4
MD17G1277700 Malus domestica HOM05D000005 ORTHO05D000012 9.5e-07 57.8 112 32.1
Nitab4.5_0000288g0040 Nicotiana tabacum HOM05D000005 ORTHO05D000012 9.5e-07 57.8 107 35.5
Nitab4.5_0001085g0160 Nicotiana tabacum HOM05D000005 ORTHO05D000012 1.2e-06 57.4 105 33.3
Dinv29641 Davidia involucrata HOM05D000005 ORTHO05D000012 2.1e-06 56.6 125 31.2
CAN.G1372.2 Capsicum annuum HOM05D000005 ORTHO05D000012 2.8e-06 56.2 77 33.8
Manes.06G012900 Manihot esculenta HOM05D000005 ORTHO05D000012 2.8e-06 56.2 106 36.8
Cpa.g.sc4.86 Carica papaya HOM05D000005 ORTHO05D000012 6.2e-06 55.1 118 29.7
RcHm_v2.0_Chr6g0281981 Rosa chinensis HOM05D000005 ORTHO05D000012 8.0e-06 54.7 89 33.7


User provided reference genes

Program Settings