Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P473T2 Lonicera japonica HOM05D031498 ORTHO05D016335 4.6e-62 241.1 129 100.0
Lj8P444T9 Lonicera japonica HOM05D009522 ORTHO05D009846 6.7e-61 237.3 129 98.4
Lj7C750T8 Lonicera japonica HOM05D031498 ORTHO05D009846 2.9e-11 72.4 128 42.2
Rhsim07G0169800 Rhododendron simsii HOM05D033576 ORTHO05D009846 3.7e-11 72.0 102 48.0
PSO063G5953 Papaver somniferum HOM05D021794 ORTHO05D016335 1.6e-09 66.6 135 37.0
PSO170G4909 Papaver somniferum HOM05D021794 ORTHO05D016335 1.6e-09 66.6 135 37.0
Peaxi162Scf00459g00082 Petunia axillaris HOM05D009522 ORTHO05D009846 2.7e-09 65.9 44 72.7
PGR031G3799 Punica granatum HOM05D009522 ORTHO05D009846 2.7e-09 65.9 94 45.7
Lsat_1_v5_gn_3_25381 Lactuca sativa HOM05D033113 ORTHO05D009846 7.8e-09 64.3 69 52.2
HPP92_015800 Vanilla planifolia HOM05D031498 ORTHO05D016335 7.8e-09 64.3 62 54.8
Solyc12g096400.2 Solanum lycopersicum HOM05D009522 ORTHO05D009846 1.0e-08 63.9 117 40.2
Sopen12g032250 Solanum pennellii HOM05D009522 ORTHO05D009846 1.0e-08 63.9 44 70.5
Aqoxy7G02994 Aquilegia oxysepala HOM05D021794 ORTHO05D009846 1.3e-08 63.5 114 43.0
Dinv21138 Davidia involucrata HOM05D003021 ORTHO05D009846 1.3e-08 63.5 46 73.9
Peaxi162Scf00045g01739 Petunia axillaris HOM05D017514 ORTHO05D009846 1.3e-08 63.5 78 48.7
HPP92_015807 Vanilla planifolia HOM05D031498 ORTHO05D016335 1.3e-08 63.5 62 54.8
MSTRG.11810 Avicennia marina HOM05D009522 ORTHO05D009846 1.7e-08 63.2 44 70.5
SGA_v2.0_scaffold27G11671 Striga asiatica HOM05D009522 ORTHO05D009846 1.7e-08 63.2 114 38.6
HanXRQChr03g0082551 Helianthus annuus HOM05D014278 ORTHO05D009846 2.3e-08 62.8 68 58.8
ECA240G3142 Erigeron canadensis HOM05D009522 ORTHO05D009846 3.0e-08 62.4 40 77.5
Atru.chr7.2642 Acer truncatum HOM05D019337 ORTHO05D009846 3.9e-08 62.0 43 76.7
MSTRG.25778 Avicennia marina HOM05D009522 ORTHO05D009846 3.9e-08 62.0 65 53.8
HPP92_010321 Vanilla planifolia HOM05D027320 ORTHO05D016335 3.9e-08 62.0 103 41.7
Nn8g40403 Nelumbo nucifera HOM05D021794 ORTHO05D016335 5.0e-08 61.6 114 40.4
Prupe.1G460100 Prunus persica HOM05D013263 ORTHO05D009846 5.0e-08 61.6 42 78.6
Cfa013269 Carpinus fangiana HOM05D014278 ORTHO05D009846 6.6e-08 61.2 41 75.6
Haze_21737 Corylus avellana HOM05D014278 ORTHO05D009846 6.6e-08 61.2 41 75.6
Migut.E01423 Erythranthe guttata HOM05D009522 ORTHO05D009846 6.6e-08 61.2 40 75.0
Ah.10g033870 Amaranthus hybridus HOM05D016385 ORTHO05D018262 8.6e-08 60.8 42 71.4
Oeu018569.1 Olea europaea HOM05D009522 ORTHO05D009846 8.6e-08 60.8 113 41.6
Nitab4.5_0001159g0190 Nicotiana tabacum HOM05D009522 ORTHO05D009846 1.1e-07 60.5 135 36.3
QL12p025151 Quercus lobata HOM05D013263 ORTHO05D009846 1.1e-07 60.5 123 35.8
MSTRG.1612 Avicennia marina HOM05D036756 ORTHO05D009846 1.9e-07 59.7 97 46.4
CAN.G566.64 Capsicum annuum HOM05D009522 ORTHO05D009846 1.9e-07 59.7 119 42.0
COL.COLO4_19033 Corchorus olitorius HOM05D019025 ORTHO05D009846 2.5e-07 59.3 42 76.2
Duzib187G1602 Durio zibethinus HOM05D019025 ORTHO05D009846 2.5e-07 59.3 125 40.8
Thecc.09G007200 Theobroma cacao HOM05D019025 ORTHO05D009846 2.5e-07 59.3 77 53.2
Nitab4.5_0000555g0230 Nicotiana tabacum HOM05D017514 ORTHO05D009846 3.3e-07 58.9 78 44.9
Nitab4.5_0004131g0040 Nicotiana tabacum HOM05D017514 ORTHO05D009846 3.3e-07 58.9 65 49.2
Nitab4.5_0010092g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 3.3e-07 58.9 138 37.0
EL10Ac2g03757 Beta vulgaris HOM05D016385 ORTHO05D018262 4.3e-07 58.5 84 47.6
Migut.A00437 Erythranthe guttata HOM05D009522 ORTHO05D009846 4.3e-07 58.5 55 54.5
TWI32G0873 Tripterygium wilfordii HOM05D013263 ORTHO05D009846 4.3e-07 58.5 131 39.7
Cc00_g05330 Coffea canephora HOM05D009522 ORTHO05D009846 5.6e-07 58.2 105 44.8
Oeu040384.1 Olea europaea HOM05D009522 ORTHO05D009846 5.6e-07 58.2 122 42.6
TWI60G1604 Tripterygium wilfordii HOM05D003021 ORTHO05D002235 7.3e-07 57.8 44 70.5
Cpa.g.sc23.16 Carica papaya HOM05D013263 ORTHO05D009846 9.5e-07 57.4 107 44.9
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 9.5e-07 57.4 49 63.3
MD15G1107800 Malus domestica HOM05D013263 ORTHO05D009846 9.5e-07 57.4 86 45.3
TWI34G1417 Tripterygium wilfordii HOM05D014278 ORTHO05D009846 9.5e-07 57.4 122 34.4
unitig_32.g10944 Utricularia gibba HOM05D009522 ORTHO05D009846 9.5e-07 57.4 49 61.2
Cc07_g03910 Coffea canephora HOM05D003021 ORTHO05D002235 1.2e-06 57.0 44 68.2
Lalb_Chr06g0175101 Lupinus albus HOM05D003021 ORTHO05D002235 1.2e-06 57.0 53 58.5
Nitab4.5_0002023g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 1.2e-06 57.0 76 48.7
SalBow8G0117 Salvia bowleyana HOM05D036756 ORTHO05D009846 1.2e-06 57.0 103 41.7
CANSAT64G0795 Cannabis sativa HOM05D003021 ORTHO05D002235 1.6e-06 56.6 44 68.2
MD08G1128300 Malus domestica HOM05D013263 ORTHO05D009846 1.6e-06 56.6 72 48.6
Peaxi162Scf00288g00084 Petunia axillaris HOM05D009522 ORTHO05D009846 1.6e-06 56.6 60 55.0
SalBow8G1342 Salvia bowleyana HOM05D036756 ORTHO05D009846 1.6e-06 56.6 103 40.8
PGSC0003DMG400029280 Solanum tuberosum HOM05D009522 ORTHO05D009846 1.6e-06 56.6 115 38.3
DCAR_011056 Daucus carota HOM05D003021 ORTHO05D002235 2.1e-06 56.2 44 68.2
CDE05G2252 Ceratophyllum demersum HOM05D003021 ORTHO05D002235 2.8e-06 55.8 140 35.0
AUR62042563 Chenopodium quinoa HOM05D003021 ORTHO05D002235 2.8e-06 55.8 66 50.0
PSO013G0053 Papaver somniferum HOM05D003021 ORTHO05D002235 2.8e-06 55.8 76 48.7
PSO063G0327 Papaver somniferum HOM05D003021 ORTHO05D002235 2.8e-06 55.8 76 48.7
Rhsim08G0073600 Rhododendron simsii HOM05D003021 ORTHO05D002235 2.8e-06 55.8 49 61.2
Sopen03g034540 Solanum pennellii HOM05D003021 ORTHO05D022173 2.8e-06 55.8 70 48.6
TAR629G0828 Trochodendron aralioides HOM05D003021 ORTHO05D002235 2.8e-06 55.8 50 60.0
COL.COLO4_21376 Corchorus olitorius HOM05D003021 ORTHO05D002235 3.6e-06 55.5 44 68.2
Duzib147G0806 Durio zibethinus HOM05D003021 ORTHO05D002235 3.6e-06 55.5 44 68.2
Duzib187G0754 Durio zibethinus HOM05D003021 ORTHO05D002235 3.6e-06 55.5 44 68.2
Gohir.A05G370400 Gossypium hirsutum HOM05D003021 ORTHO05D002235 3.6e-06 55.5 44 68.2
Gohir.D04G045100 Gossypium hirsutum HOM05D003021 ORTHO05D002235 3.6e-06 55.5 44 68.2
Gorai.012G050300 Gossypium raimondii HOM05D003021 ORTHO05D002235 3.6e-06 55.5 44 68.2
Hund03292 Selenicereus undatus HOM05D016385 ORTHO05D018262 3.6e-06 55.5 42 69.0
THA.LOC104814972 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 3.6e-06 55.5 125 37.6
Thecc.04G090900 Theobroma cacao HOM05D003021 ORTHO05D002235 3.6e-06 55.5 44 68.2
TPR.G1990 Trifolium pratense HOM05D014856 ORTHO05D002235 3.6e-06 55.5 42 66.7
Lsat_1_v5_gn_4_170321 Lactuca sativa HOM05D003021 ORTHO05D002235 4.7e-06 55.1 44 65.9
Lalb_Chr07g0178231 Lupinus albus HOM05D014856 ORTHO05D002235 4.7e-06 55.1 47 59.6
QL02p039488 Quercus lobata HOM05D003021 ORTHO05D002235 4.7e-06 55.1 73 46.6
Sed0005734 Sechium edule HOM05D003021 ORTHO05D002235 4.7e-06 55.1 75 48.0
PGSC0003DMG400024656 Solanum tuberosum HOM05D003021 ORTHO05D022173 4.7e-06 55.1 77 48.1
SGA_v2.0_scaffold121G33031 Striga asiatica HOM05D009522 ORTHO05D009846 4.7e-06 55.1 38 71.1
TAR371G0449 Trochodendron aralioides HOM05D003021 ORTHO05D002235 4.7e-06 55.1 44 65.9
Ah.11g043860 Amaranthus hybridus HOM05D016385 ORTHO05D018262 6.2e-06 54.7 47 61.7
ATR0564G160 Amborella trichopoda HOM05D003021 ORTHO05D002235 6.2e-06 54.7 116 36.2
CSS0009627 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 6.2e-06 54.7 44 65.9
CSS0042635 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 6.2e-06 54.7 44 65.9
CAN.G673.17 Capsicum annuum HOM05D017514 ORTHO05D009846 6.2e-06 54.7 42 61.9
ClCG11G004640 Citrullus lanatus HOM05D003021 ORTHO05D002235 6.2e-06 54.7 67 50.7
MELO3C022022.2 Cucumis melo HOM05D003021 ORTHO05D002235 6.2e-06 54.7 74 50.0
CsaV3_5G038410 Cucumis sativus L. HOM05D003021 ORTHO05D002235 6.2e-06 54.7 74 50.0
Duzib168G1354 Durio zibethinus HOM05D019025 ORTHO05D009846 6.2e-06 54.7 104 39.4
MD09G1061400 Malus domestica HOM05D003021 ORTHO05D002235 6.2e-06 54.7 44 65.9
Actinidia01976 Actinidia chinensis HOM05D003021 ORTHO05D002235 8.1e-06 54.3 100 42.0
CAN.G908.7 Capsicum annuum HOM05D009522 ORTHO05D009846 8.1e-06 54.3 125 36.8
CiPaw.07G212500 Carya illinoinensis HOM05D013263 ORTHO05D009846 8.1e-06 54.3 133 39.8
Thhalv10013233m.g Eutrema salsugineum HOM05D009040 ORTHO05D002235 8.1e-06 54.3 88 45.5
FAN20G1345 Fragaria x ananassa HOM05D013263 ORTHO05D009846 8.1e-06 54.3 119 41.2
Gohir.D09G010600 Gossypium hirsutum HOM05D003021 ORTHO05D002235 8.1e-06 54.3 44 63.6
Nn3g17378 Nelumbo nucifera HOM05D003021 ORTHO05D002235 8.1e-06 54.3 69 47.8
Potri.017G090200 Populus trichocarpa HOM05D003021 ORTHO05D002235 8.1e-06 54.3 43 67.4
Solyc08g069020.1 Solanum lycopersicum HOM05D009522 ORTHO05D009846 8.1e-06 54.3 44 68.2


User provided reference genes

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