Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P385T8 Lonicera japonica HOM05D000031 ORTHO05D016285 4.0e-69 264.6 133 100.0
Lj8P384T8 Lonicera japonica HOM05D000031 ORTHO05D016285 5.1e-64 247.7 133 96.2
Lj8P389T6 Lonicera japonica HOM05D000031 ORTHO05D016285 4.3e-55 218.0 133 82.7
Lj8C398G2 Lonicera japonica HOM05D000031 ORTHO05D016285 9.7e-47 190.3 128 75.8
Lj8C397G1 Lonicera japonica HOM05D000031 ORTHO05D016285 1.8e-45 186.0 128 75.0
Lj8C393G1 Lonicera japonica HOM05D000031 ORTHO05D016285 8.2e-38 160.6 110 73.6
Lju50C30T4 Lonicera japonica HOM05D000031 ORTHO05D016285 4.5e-36 154.8 116 69.8
Lju50C32T0 Lonicera japonica HOM05D000031 ORTHO05D016285 2.2e-35 152.5 126 63.5
Lj8A402G23 Lonicera japonica HOM05D000031 ORTHO05D016285 3.1e-29 132.1 106 64.2
Lj8A398T7 Lonicera japonica HOM05D000031 ORTHO05D016285 2.1e-25 119.4 71 81.7
Lj8C399G1 Lonicera japonica HOM05D000031 ORTHO05D000030 1.7e-19 99.8 110 53.6
CSS0049500 Camellia sinensis var. sinensis HOM05D000031 ORTHO05D000030 8.0e-17 90.9 124 48.4
Lju50A31G15 Lonicera japonica HOM05D000041 ORTHO05D000452 4.0e-16 88.6 113 46.9
CSS0028626 Camellia sinensis var. sinensis HOM05D000031 ORTHO05D000030 7.0e-13 77.8 122 43.4
TWI31G1017 Tripterygium wilfordii HOM05D000031 ORTHO05D000030 9.2e-13 77.4 103 44.7
TAR564G0001 Trochodendron aralioides HOM05D000031 ORTHO05D000030 9.2e-13 77.4 118 44.9
TAR627G0149 Trochodendron aralioides HOM05D000031 ORTHO05D000030 2.0e-12 76.3 121 43.0
TWI79G0932 Tripterygium wilfordii HOM05D000031 ORTHO05D000030 1.0e-11 73.9 99 46.5
Potri.009G154600 Populus trichocarpa HOM05D000031 ORTHO05D000030 1.7e-11 73.2 128 39.1
Potri.009G154100 Populus trichocarpa HOM05D000031 ORTHO05D000030 2.9e-11 72.4 129 40.3
TAR636G1776 Trochodendron aralioides HOM05D000031 ORTHO05D000030 2.9e-11 72.4 94 50.0
TWI79G0618 Tripterygium wilfordii HOM05D000031 ORTHO05D000030 8.6e-11 70.9 128 38.3
TWI31G1025 Tripterygium wilfordii HOM05D000031 ORTHO05D000030 1.5e-10 70.1 103 40.8
Potri.004G191400 Populus trichocarpa HOM05D000031 ORTHO05D000030 1.9e-10 69.7 107 40.2
TWI31G0862 Tripterygium wilfordii HOM05D000031 ORTHO05D000030 2.5e-10 69.3 99 43.4
Ciclev10019610m.g Citrus clementina HOM05D000031 ORTHO05D000030 3.3e-10 68.9 118 37.3
Ciclev10027907m.g Citrus clementina HOM05D000031 ORTHO05D000030 7.3e-10 67.8 118 38.1
Ciclev10030285m.g Citrus clementina HOM05D000031 ORTHO05D000030 8.0e-09 64.3 123 37.4
Eucgr.C02489 Eucalyptus grandis HOM05D000031 ORTHO05D000030 1.8e-08 63.2 79 46.8
Eucgr.C03088 Eucalyptus grandis HOM05D000031 ORTHO05D000030 2.3e-08 62.8 124 33.9
Sabra09G0121500 Salix brachista HOM05D000031 ORTHO05D000030 2.3e-08 62.8 99 40.4
Potri.004G192900 Populus trichocarpa HOM05D000031 ORTHO05D000030 3.1e-08 62.4 100 41.0
Sabra04G0131000 Salix brachista HOM05D000031 ORTHO05D000030 3.1e-08 62.4 99 40.4
Sabra04G0131100 Salix brachista HOM05D000031 ORTHO05D000030 3.1e-08 62.4 99 40.4
Eucgr.C02543 Eucalyptus grandis HOM05D000031 ORTHO05D000030 4.0e-08 62.0 78 46.2
CSS0048643 Camellia sinensis var. sinensis HOM05D000031 ORTHO05D000030 6.8e-08 61.2 125 36.8
Ciclev10023452m.g Citrus clementina HOM05D000031 ORTHO05D000030 8.9e-08 60.8 118 32.2
Eucgr.D00158 Eucalyptus grandis HOM05D000031 ORTHO05D000030 1.2e-07 60.5 72 47.2
Eucgr.H02824 Eucalyptus grandis HOM05D000031 ORTHO05D000030 1.2e-07 60.5 92 42.4
PSO675G0822 Papaver somniferum HOM05D000031 ORTHO05D000030 1.2e-07 60.5 128 35.9
Sabra09G0121600 Salix brachista HOM05D000031 ORTHO05D000030 1.2e-07 60.5 99 39.4
Eucgr.F01947 Eucalyptus grandis HOM05D000031 ORTHO05D000030 1.5e-07 60.1 99 42.4
Potri.004G191450 Populus trichocarpa HOM05D000031 ORTHO05D000030 1.5e-07 60.1 83 39.8
Potri.004G192000 Populus trichocarpa HOM05D000031 ORTHO05D000030 1.5e-07 60.1 99 41.4
Sabra09G0121300 Salix brachista HOM05D000031 ORTHO05D000030 2.0e-07 59.7 83 41.0
Potri.004G192100 Populus trichocarpa HOM05D000031 ORTHO05D000030 2.6e-07 59.3 100 40.0
Potri.004G192400 Populus trichocarpa HOM05D000031 ORTHO05D000030 3.4e-07 58.9 100 40.0
CANSAT35G1898 Cannabis sativa HOM05D000031 ORTHO05D000030 5.8e-07 58.2 119 37.0
Eucgr.B01098 Eucalyptus grandis HOM05D000031 ORTHO05D000030 5.8e-07 58.2 112 33.9
Eucgr.C03125 Eucalyptus grandis HOM05D000031 ORTHO05D000030 5.8e-07 58.2 124 33.1
Eucgr.C03141 Eucalyptus grandis HOM05D000031 ORTHO05D000030 5.8e-07 58.2 124 32.3
Eucgr.D00139 Eucalyptus grandis HOM05D000031 ORTHO05D000030 5.8e-07 58.2 72 44.4
CANSAT35G0457 Cannabis sativa HOM05D000031 ORTHO05D000030 7.5e-07 57.8 108 38.9
Sabra04G0130200 Salix brachista HOM05D000031 ORTHO05D000030 7.5e-07 57.8 118 39.0
Aqoxy7G00785 Aquilegia oxysepala HOM05D000031 ORTHO05D000030 9.8e-07 57.4 120 35.8
Eucgr.C02484 Eucalyptus grandis HOM05D000031 ORTHO05D000030 9.8e-07 57.4 78 43.6
Potri.004G192700 Populus trichocarpa HOM05D000031 ORTHO05D000030 9.8e-07 57.4 84 40.5
Manes.11G104100 Manihot esculenta HOM05D000031 ORTHO05D000030 1.3e-06 57.0 83 42.2
ATR0605G329 Amborella trichopoda HOM05D000031 ORTHO05D000030 1.7e-06 56.6 101 34.7
CSS0028250 Camellia sinensis var. sinensis HOM05D000031 ORTHO05D000030 1.7e-06 56.6 125 38.4
QL12p008645 Quercus lobata HOM05D000031 ORTHO05D000030 1.7e-06 56.6 100 40.0
MBI04_g11520_MAGBIO Magnolia biondii HOM05D000031 ORTHO05D000030 2.2e-06 56.2 80 38.8
Nitab4.5_0010990g0020 Nicotiana tabacum HOM05D000031 ORTHO05D000030 2.2e-06 56.2 119 31.9
Aqoxy7G00784 Aquilegia oxysepala HOM05D000031 ORTHO05D000030 2.9e-06 55.8 120 36.7
COL.COLO4_27744 Corchorus olitorius HOM05D000031 ORTHO05D000030 2.9e-06 55.8 129 34.1
Eucgr.F01919 Eucalyptus grandis HOM05D000031 ORTHO05D000030 2.9e-06 55.8 94 40.4
TAR376G0224 Trochodendron aralioides HOM05D000031 ORTHO05D000030 2.9e-06 55.8 100 34.0
MBI04_g40506_MAGBIO Magnolia biondii HOM05D000031 ORTHO05D000030 3.7e-06 55.5 111 36.0
Nn1g08584 Nelumbo nucifera HOM05D000031 ORTHO05D000030 3.7e-06 55.5 78 41.0
Solyc09g014720.3 Solanum lycopersicum HOM05D000031 ORTHO05D000030 3.7e-06 55.5 101 36.6
Sopen09g007560 Solanum pennellii HOM05D000031 ORTHO05D000030 3.7e-06 55.5 101 36.6
CANSAT35G0166 Cannabis sativa HOM05D000031 ORTHO05D000030 6.4e-06 54.7 120 37.5
Cfa014826 Carpinus fangiana HOM05D000031 ORTHO05D000030 6.4e-06 54.7 123 34.1
Eucgr.F01915 Eucalyptus grandis HOM05D000031 ORTHO05D000030 6.4e-06 54.7 98 37.8
Nn1g08499 Nelumbo nucifera HOM05D000031 ORTHO05D000030 6.4e-06 54.7 78 41.0
Nn1g08542 Nelumbo nucifera HOM05D000031 ORTHO05D000030 6.4e-06 54.7 78 41.0
Nn7g36329 Nelumbo nucifera HOM05D000031 ORTHO05D000030 6.4e-06 54.7 100 36.0
Sc19g0005150 Simmondsia chinensis HOM05D000031 ORTHO05D000030 6.4e-06 54.7 110 34.5
PGR142G1856 Punica granatum HOM05D000031 ORTHO05D000030 8.3e-06 54.3 81 40.7
Sabra04G0130400 Salix brachista HOM05D000031 ORTHO05D000030 8.3e-06 54.3 99 37.4
Sabra04G0130900 Salix brachista HOM05D000031 ORTHO05D000030 8.3e-06 54.3 99 38.4
PGSC0003DMG402008483 Solanum tuberosum HOM05D000031 ORTHO05D000030 8.3e-06 54.3 101 36.6


User provided reference genes

Program Settings