Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P33T20 Lonicera japonica HOM05D000664 ORTHO05D000491 6.0e-57 223.8 101 100.0
Lj8C33T15 Lonicera japonica HOM05D000664 ORTHO05D000491 1.2e-28 129.8 93 65.6
Lj8C33T14 Lonicera japonica HOM05D000664 ORTHO05D000491 1.8e-24 115.9 86 62.8
TAR627G1137 Trochodendron aralioides HOM05D000664 ORTHO05D000491 1.6e-12 76.3 97 40.2
Dinv26464 Davidia involucrata HOM05D000664 ORTHO05D000491 1.0e-11 73.6 83 45.8
TAR627G0384 Trochodendron aralioides HOM05D000664 ORTHO05D000491 5.0e-11 71.2 97 38.1
Migut.F01252 Erythranthe guttata HOM05D000664 ORTHO05D000491 1.5e-10 69.7 93 37.6
FAN17G0956 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.5e-10 69.7 81 42.0
Ciclev10005096m.g Citrus clementina HOM05D000664 ORTHO05D000491 1.9e-10 69.3 84 42.9
Cfa020730 Carpinus fangiana HOM05D000664 ORTHO05D000491 2.5e-10 68.9 81 42.0
MD13G1235200 Malus domestica HOM05D000664 ORTHO05D000491 2.5e-10 68.9 85 40.0
Rhsim03G0162300 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.5e-10 68.9 72 45.8
RcHm_v2.0_Chr4g0398061 Rosa chinensis HOM05D000664 ORTHO05D000491 3.2e-10 68.6 69 46.4
TAR626G1797 Trochodendron aralioides HOM05D000664 ORTHO05D000491 3.2e-10 68.6 72 47.2
Cpa.g.sc13.265 Carica papaya HOM05D000664 ORTHO05D000491 4.2e-10 68.2 70 45.7
Migut.F01251 Erythranthe guttata HOM05D000664 ORTHO05D000491 5.5e-10 67.8 93 37.6
FvH4_4g06360 Fragaria vesca HOM05D000664 ORTHO05D000491 5.5e-10 67.8 74 43.2
Lj7P466T32 Lonicera japonica HOM05D000664 ORTHO05D000491 7.2e-10 67.4 64 51.6
Thecc.03G149500 Theobroma cacao HOM05D000664 ORTHO05D000491 7.2e-10 67.4 70 47.1
COL.COLO4_37365 Corchorus olitorius HOM05D000664 ORTHO05D000491 9.4e-10 67.0 73 45.2
FAN22G1400 Fragaria x ananassa HOM05D000664 ORTHO05D000491 9.4e-10 67.0 81 40.7
GSVIVG01017506001 Vitis vinifera HOM05D000664 ORTHO05D000491 9.4e-10 67.0 71 46.5
Haze_19047 Corylus avellana HOM05D000664 ORTHO05D000491 1.2e-09 66.6 81 40.7
FAN07G1045 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.2e-09 66.6 81 39.5
Atru.chr1.874 Acer truncatum HOM05D000664 ORTHO05D000491 1.6e-09 66.2 81 38.3
Duzib068G1024 Durio zibethinus HOM05D000664 ORTHO05D000491 1.6e-09 66.2 70 45.7
Migut.F01253 Erythranthe guttata HOM05D000664 ORTHO05D000491 1.6e-09 66.2 93 37.6
FvH4_4g06300 Fragaria vesca HOM05D000664 ORTHO05D000491 1.6e-09 66.2 81 38.3
FAN12G4320 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.6e-09 66.2 81 38.3
Lj8C46T5 Lonicera japonica HOM05D000664 ORTHO05D000491 1.6e-09 66.2 92 38.0
QL11p009388 Quercus lobata HOM05D000664 ORTHO05D000491 1.6e-09 66.2 69 46.4
Atru.chr1.884 Acer truncatum HOM05D000664 ORTHO05D000491 2.1e-09 65.9 68 47.1
Gorai.008G214400 Gossypium raimondii HOM05D000664 ORTHO05D000491 2.1e-09 65.9 71 42.3
Potri.010G254000 Populus trichocarpa HOM05D000664 ORTHO05D000491 2.1e-09 65.9 70 51.4
Gohir.D12G199200 Gossypium hirsutum HOM05D000664 ORTHO05D000491 2.7e-09 65.5 71 42.3
TAR626G1239 Trochodendron aralioides HOM05D000664 ORTHO05D000491 2.7e-09 65.5 95 38.9
CiPaw.15G154900 Carya illinoinensis HOM05D000664 ORTHO05D000491 3.6e-09 65.1 76 44.7
Lj7C282T19 Lonicera japonica HOM05D000664 ORTHO05D000491 3.6e-09 65.1 64 51.6
RcHm_v2.0_Chr4g0398071 Rosa chinensis HOM05D000664 ORTHO05D000491 3.6e-09 65.1 81 38.3
FvH4_4g06310 Fragaria vesca HOM05D000664 ORTHO05D000491 4.7e-09 64.7 83 38.6
Lj3P394T10 Lonicera japonica HOM05D000664 ORTHO05D000491 4.7e-09 64.7 69 46.4
Manes.06G131800 Manihot esculenta HOM05D000664 ORTHO05D000491 4.7e-09 64.7 98 37.8
Atru.chr1.870 Acer truncatum HOM05D000664 ORTHO05D000491 8.0e-09 63.9 60 48.3
Dinv16863 Davidia involucrata HOM05D000664 ORTHO05D000491 8.0e-09 63.9 100 42.0
FAN07G0903 Fragaria x ananassa HOM05D000664 ORTHO05D000491 8.0e-09 63.9 81 38.3
Prupe.1G066300 Prunus persica HOM05D000664 ORTHO05D000491 8.0e-09 63.9 73 43.8
Cc02_g04650 Coffea canephora HOM05D000664 ORTHO05D000491 1.0e-08 63.5 77 36.4
FAN12G4155 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.0e-08 63.5 83 37.3
Hma1.2p1_1883F.1_g306450 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 1.0e-08 63.5 71 43.7
Lj7P466T37 Lonicera japonica HOM05D000664 ORTHO05D000491 1.0e-08 63.5 55 50.9
RcHm_v2.0_Chr4g0388661 Rosa chinensis HOM05D000664 ORTHO05D000491 1.4e-08 63.2 64 43.8
RcHm_v2.0_Chr4g0388801 Rosa chinensis HOM05D000664 ORTHO05D000491 1.4e-08 63.2 64 43.8
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 1.8e-08 62.8 60 50.0
RcHm_v2.0_Chr4g0398091 Rosa chinensis HOM05D000664 ORTHO05D000491 1.8e-08 62.8 81 38.3
Lj1C976T13 Lonicera japonica HOM05D000664 ORTHO05D000491 2.3e-08 62.4 69 43.5
MD16G1240000 Malus domestica HOM05D000664 ORTHO05D000491 2.3e-08 62.4 60 48.3
MD16G1240100 Malus domestica HOM05D000664 ORTHO05D000491 2.3e-08 62.4 71 39.4
TAR626G1986 Trochodendron aralioides HOM05D000664 ORTHO05D000491 2.3e-08 62.4 72 47.2
GSVIVG01010911001 Vitis vinifera HOM05D000664 ORTHO05D000491 2.3e-08 62.4 90 34.4
FvH4_4g06320 Fragaria vesca HOM05D000664 ORTHO05D000491 3.0e-08 62.0 81 37.0
FAN05G4885 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.0e-08 62.0 82 40.2
Lj7P698T73 Lonicera japonica HOM05D000664 ORTHO05D000491 3.0e-08 62.0 63 47.6
RcHm_v2.0_Chr4g0398041 Rosa chinensis HOM05D000664 ORTHO05D000491 3.0e-08 62.0 66 43.9
Eucgr.C02184 Eucalyptus grandis HOM05D000664 ORTHO05D000491 4.0e-08 61.6 71 42.3
FAN07G0651 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.0e-08 61.6 83 37.3
MD13G1235400 Malus domestica HOM05D000664 ORTHO05D000491 4.0e-08 61.6 71 46.5
Nitab4.5_0006345g0010 Nicotiana tabacum HOM05D000664 ORTHO05D000491 4.0e-08 61.6 69 42.0
TAR626G0460 Trochodendron aralioides HOM05D000664 ORTHO05D000491 4.0e-08 61.6 69 42.0
Lj7C282T1 Lonicera japonica HOM05D000664 ORTHO05D000491 5.2e-08 61.2 63 47.6
RcHm_v2.0_Chr4g0388641 Rosa chinensis HOM05D000664 ORTHO05D000491 5.2e-08 61.2 51 51.0
CAN.G407.35 Capsicum annuum HOM05D000664 ORTHO05D000491 6.7e-08 60.8 58 46.6
Migut.F01199 Erythranthe guttata HOM05D000664 ORTHO05D000491 6.7e-08 60.8 73 41.1
FAN22G2019 Fragaria x ananassa HOM05D000664 ORTHO05D000491 6.7e-08 60.8 81 35.8
RcHm_v2.0_Chr4g0398111 Rosa chinensis HOM05D000664 ORTHO05D000491 6.7e-08 60.8 60 48.3
FAN14G0409 Fragaria x ananassa HOM05D000664 ORTHO05D000491 8.8e-08 60.5 67 46.3
FAN17G0186 Fragaria x ananassa HOM05D000664 ORTHO05D000491 8.8e-08 60.5 81 35.8
Atru.chr1.895 Acer truncatum HOM05D000664 ORTHO05D000491 1.1e-07 60.1 72 44.4
COL.COLO4_37345 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.1e-07 60.1 76 38.2
FAN22G2265 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.1e-07 60.1 83 36.1
Lj7C282T2 Lonicera japonica HOM05D000664 ORTHO05D000491 1.1e-07 60.1 63 49.2
Prupe.1G066400 Prunus persica HOM05D000664 ORTHO05D000491 1.1e-07 60.1 60 46.7
Ciclev10005086m.g Citrus clementina HOM05D000664 ORTHO05D000491 1.5e-07 59.7 93 36.6
Gohir.A12G196750 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.5e-07 59.7 53 45.3
Lj7C282T18 Lonicera japonica HOM05D000664 ORTHO05D000491 1.5e-07 59.7 66 48.5
Nitab4.5_0004055g0050 Nicotiana tabacum HOM05D000664 ORTHO05D000491 1.5e-07 59.7 69 40.6
Rhsim03G0162400 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.5e-07 59.7 74 41.9
RcHm_v2.0_Chr4g0396501 Rosa chinensis HOM05D000664 ORTHO05D000491 1.5e-07 59.7 66 43.9
Actinidia31674 Actinidia chinensis HOM05D000664 ORTHO05D000491 2.0e-07 59.3 71 43.7
Actinidia31675 Actinidia chinensis HOM05D000664 ORTHO05D000491 2.0e-07 59.3 71 39.4
FvH4_1g12890 Fragaria vesca HOM05D000664 ORTHO05D000491 2.0e-07 59.3 50 52.0
FvH4_6g53610 Fragaria vesca HOM05D000664 ORTHO05D000491 2.0e-07 59.3 67 44.8
Lj3A384G19 Lonicera japonica HOM05D000664 ORTHO05D000491 2.0e-07 59.3 71 42.3
PSO170G0618 Papaver somniferum HOM05D000664 ORTHO05D000491 2.0e-07 59.3 74 35.1
Rhsim08G0251200 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.0e-07 59.3 71 40.8
RcHm_v2.0_Chr4g0396041 Rosa chinensis HOM05D000664 ORTHO05D000491 2.0e-07 59.3 73 41.1
TAR626G1309 Trochodendron aralioides HOM05D000664 ORTHO05D000491 2.0e-07 59.3 60 48.3
FvH4_6g43961 Fragaria vesca HOM05D000664 ORTHO05D000491 2.6e-07 58.9 83 37.3
PSO063G1615 Papaver somniferum HOM05D000664 ORTHO05D000491 2.6e-07 58.9 75 37.3
PSO170G2464 Papaver somniferum HOM05D000664 ORTHO05D000491 2.6e-07 58.9 67 35.8
PSO729G0187 Papaver somniferum HOM05D000664 ORTHO05D000491 2.6e-07 58.9 71 38.0
Nitab4.5_0002322g0180 Nicotiana tabacum HOM05D000664 ORTHO05D000491 3.3e-07 58.5 71 40.8
Nitab4.5_0000096g0170 Nicotiana tabacum HOM05D000664 ORTHO05D000491 5.7e-07 57.8 69 39.1
Actinidia13606 Actinidia chinensis HOM05D000664 ORTHO05D000491 7.5e-07 57.4 71 39.4
CAN.G1891.7 Capsicum annuum HOM05D000664 ORTHO05D000491 7.5e-07 57.4 69 39.1
CAN.G1891.9 Capsicum annuum HOM05D000664 ORTHO05D000491 7.5e-07 57.4 69 39.1
FvH4_4g06280 Fragaria vesca HOM05D000664 ORTHO05D000491 7.5e-07 57.4 76 44.7
Hma1.2p1_1404F.1_g281360 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 7.5e-07 57.4 96 35.4
ClCG01G004670 Citrullus lanatus HOM05D000664 ORTHO05D000491 9.7e-07 57.0 60 41.7
Cc06_g12830 Coffea canephora HOM05D000664 ORTHO05D000491 9.7e-07 57.0 57 40.4
COL.COLO4_37349 Corchorus olitorius HOM05D000664 ORTHO05D000491 9.7e-07 57.0 73 41.1
Eucgr.F04035 Eucalyptus grandis HOM05D000664 ORTHO05D000491 1.3e-06 56.6 63 47.6
FvH4_4g01420 Fragaria vesca HOM05D000664 ORTHO05D000491 1.3e-06 56.6 80 37.5
FAN07G2627 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.3e-06 56.6 65 40.0
PSO210G5658 Papaver somniferum HOM05D000664 ORTHO05D000491 1.3e-06 56.6 71 36.6
RcHm_v2.0_Chr2g0174881 Rosa chinensis HOM05D000664 ORTHO05D000491 1.3e-06 56.6 69 43.5
RcHm_v2.0_Chr2g0174951 Rosa chinensis HOM05D000664 ORTHO05D000491 1.3e-06 56.6 69 43.5
SGA_v2.0_scaffold136G35012 Striga asiatica HOM05D000664 ORTHO05D000491 1.3e-06 56.6 70 40.0
Actinidia31673 Actinidia chinensis HOM05D000664 ORTHO05D000491 1.7e-06 56.2 79 38.0
CAN.G54.4 Capsicum annuum HOM05D000664 ORTHO05D000491 1.7e-06 56.2 54 42.6
COL.COLO4_37350 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.7e-06 56.2 71 36.6
MELO3C005495.2 Cucumis melo HOM05D000664 ORTHO05D000491 1.7e-06 56.2 71 39.4
Dinv26466 Davidia involucrata HOM05D000664 ORTHO05D000491 1.7e-06 56.2 75 45.3
FvH4_6g31140 Fragaria vesca HOM05D000664 ORTHO05D000491 1.7e-06 56.2 66 40.9
FvH4_6g31161 Fragaria vesca HOM05D000664 ORTHO05D035552 1.7e-06 56.2 69 39.1
FvH4_6g43941 Fragaria vesca HOM05D000664 ORTHO05D000491 1.7e-06 56.2 66 39.4
FAN14G1147 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.7e-06 56.2 69 39.1
FAN14G3348 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.7e-06 56.2 67 43.3
FAN14G4417 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.7e-06 56.2 66 40.9
Hma1.2p1_1883F.1_g306430 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 1.7e-06 56.2 95 35.8
Lj2P385T13 Lonicera japonica HOM05D000664 ORTHO05D000491 1.7e-06 56.2 52 50.0
Solyc07g015800.1 Solanum lycopersicum HOM05D000664 ORTHO05D000491 1.7e-06 56.2 66 40.9
COL.COLO4_37348 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.2e-06 55.8 77 37.7
FAN12G1398 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.2e-06 55.8 76 43.4
Hma1.2p1_1883F.1_g306440 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 2.2e-06 55.8 67 40.3
Nitab4.5_0000413g0140 Nicotiana tabacum HOM05D000664 ORTHO05D000491 2.2e-06 55.8 57 42.1
Peaxi162Scf00332g10026 Petunia axillaris HOM05D000664 ORTHO05D000491 2.2e-06 55.8 58 41.4
Rhsim03G0162200 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.2e-06 55.8 71 38.0
Sopen07g005630 Solanum pennellii HOM05D000664 ORTHO05D000491 2.2e-06 55.8 66 39.4
COL.COLO4_37367 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.8e-06 55.5 76 34.2
Duzib177G1156 Durio zibethinus HOM05D000664 ORTHO05D000491 2.8e-06 55.5 73 39.7
FvH4_6g52062 Fragaria vesca HOM05D000664 ORTHO05D000491 2.8e-06 55.5 86 36.0
FvH4_6g52080 Fragaria vesca HOM05D000664 ORTHO05D000491 2.8e-06 55.5 86 36.0
FAN09G2451 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.8e-06 55.5 75 40.0
FAN17G1155 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.8e-06 55.5 63 47.6
Nitab4.5_0000096g0150 Nicotiana tabacum HOM05D000664 ORTHO05D000491 2.8e-06 55.5 53 43.4
Nitab4.5_0002322g0160 Nicotiana tabacum HOM05D000664 ORTHO05D000491 2.8e-06 55.5 58 39.7
PSO170G4299 Papaver somniferum HOM05D000664 ORTHO05D000491 2.8e-06 55.5 55 43.6
Peaxi162Scf00320g00071 Petunia axillaris HOM05D000664 ORTHO05D000491 2.8e-06 55.5 54 44.4
PGSC0003DMG400014133 Solanum tuberosum HOM05D000664 ORTHO05D000491 2.8e-06 55.5 58 41.4
DCAR_018085 Daucus carota HOM05D000664 ORTHO05D000491 3.7e-06 55.1 53 50.9
FvH4_4g06370 Fragaria vesca HOM05D000664 ORTHO05D000491 3.7e-06 55.1 64 40.6
FvH4_6g52941 Fragaria vesca HOM05D000664 ORTHO05D000491 3.7e-06 55.1 75 40.0
FvH4_6g53021 Fragaria vesca HOM05D000664 ORTHO05D000491 3.7e-06 55.1 56 42.9
FAN12G1944 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.7e-06 55.1 64 40.6
Hma1.2p1_0432F.1_g152020 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 3.7e-06 55.1 77 36.4
FAN07G2357 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.8e-06 54.7 76 43.4
Hma1.2p1_1404F.1_g281320 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 4.8e-06 54.7 79 39.2
Manes.14G038100 Manihot esculenta HOM05D000664 ORTHO05D000491 4.8e-06 54.7 60 46.7
Nitab4.5_0004217g0020 Nicotiana tabacum HOM05D000664 ORTHO05D000491 4.8e-06 54.7 69 36.2
Nitab4.5_0011101g0010 Nicotiana tabacum HOM05D000664 ORTHO05D000491 4.8e-06 54.7 54 44.4
CAN.G407.34 Capsicum annuum HOM05D000664 ORTHO05D000491 6.3e-06 54.3 70 35.7
Ciclev10006867m.g Citrus clementina HOM05D000664 ORTHO05D000491 6.3e-06 54.3 71 42.3
FAN22G0437 Fragaria x ananassa HOM05D000664 ORTHO05D000491 6.3e-06 54.3 76 43.4
Gohir.D12G199300 Gossypium hirsutum HOM05D000664 ORTHO05D000491 6.3e-06 54.3 70 38.6
Gorai.001G050600 Gossypium raimondii HOM05D000664 ORTHO05D000491 6.3e-06 54.3 71 36.6
Gorai.008G214500 Gossypium raimondii HOM05D000664 ORTHO05D000491 6.3e-06 54.3 70 38.6
Rhsim03G0162000 Rhododendron simsii HOM05D000664 ORTHO05D000491 6.3e-06 54.3 71 39.4
RcHm_v2.0_Chr4g0388001 Rosa chinensis HOM05D000664 ORTHO05D000491 6.3e-06 54.3 73 38.4
COL.COLO4_37362 Corchorus olitorius HOM05D000664 ORTHO05D000491 8.2e-06 53.9 74 33.8
Dinv16864 Davidia involucrata HOM05D000664 ORTHO05D000491 8.2e-06 53.9 53 45.3
FAN05G0017 Fragaria x ananassa HOM05D000664 ORTHO05D000491 8.2e-06 53.9 59 40.7
FAN05G1881 Fragaria x ananassa HOM05D000664 ORTHO05D000491 8.2e-06 53.9 63 42.9
Lsat_1_v5_gn_9_51461 Lactuca sativa HOM05D000664 ORTHO05D000491 8.2e-06 53.9 55 49.1
Potri.013G065500 Populus trichocarpa HOM05D000664 ORTHO05D000491 8.2e-06 53.9 70 41.4
QL05p088450 Quercus lobata HOM05D000664 ORTHO05D000491 8.2e-06 53.9 70 40.0
PGSC0003DMG400030719 Solanum tuberosum HOM05D000664 ORTHO05D000491 8.2e-06 53.9 77 33.8


User provided reference genes

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