Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 8.9e-90 333.6 166 100.0
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 1.5e-52 209.9 113 89.4
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 3.3e-52 208.8 113 89.4
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 4.3e-52 208.4 121 84.3
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 1.6e-51 206.5 113 88.5
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 2.1e-51 206.1 108 91.7
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 4.8e-51 204.9 102 97.1
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 8.1e-51 204.1 118 84.7
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 8.1e-51 204.1 118 84.7
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 8.1e-51 204.1 115 85.2
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.1e-50 203.8 111 90.1
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.1e-50 203.8 111 90.1
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 1.1e-50 203.8 114 86.0
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 1.4e-50 203.4 106 92.5
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 1.4e-50 203.4 117 83.8
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.8e-50 203.0 102 95.1
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.4e-50 202.6 127 81.1
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 4.0e-50 201.8 110 88.2
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 5.3e-50 201.4 108 89.8
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 5.3e-50 201.4 114 85.1
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 6.9e-50 201.1 111 88.3
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 6.9e-50 201.1 110 87.3
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 9.0e-50 200.7 116 84.5
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.2e-49 200.3 105 92.4
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 2.0e-49 199.5 102 94.1
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.0e-49 199.5 166 66.3
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 3.4e-49 198.7 116 86.2
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 3.4e-49 198.7 120 80.8
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 3.4e-49 198.7 110 90.0
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 4.4e-49 198.4 108 87.0
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 4.4e-49 198.4 108 87.0
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 4.4e-49 198.4 110 88.2
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 5.8e-49 198.0 116 81.9
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 5.8e-49 198.0 108 87.0
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 5.8e-49 198.0 113 86.7
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 5.8e-49 198.0 110 88.2
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 1.3e-48 196.8 104 89.4
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 1.7e-48 196.4 120 80.8
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 2.2e-48 196.1 103 92.2
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 2.9e-48 195.7 108 86.1
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 2.9e-48 195.7 150 70.7
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 2.9e-48 195.7 105 90.5
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 3.8e-48 195.3 102 89.2
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 3.8e-48 195.3 108 88.0
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 3.8e-48 195.3 107 89.7
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 4.9e-48 194.9 108 86.1
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 4.9e-48 194.9 102 90.2
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 4.9e-48 194.9 105 90.5
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 4.9e-48 194.9 111 86.5
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 6.4e-48 194.5 105 90.5
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 6.4e-48 194.5 115 82.6
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 8.4e-48 194.1 108 88.0
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 8.4e-48 194.1 107 84.1
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 8.4e-48 194.1 111 86.5
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 1.1e-47 193.7 108 88.0
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 1.1e-47 193.7 108 88.0
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 1.4e-47 193.4 142 70.4
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 1.4e-47 193.4 142 70.4
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 1.4e-47 193.4 108 86.1
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 1.9e-47 193.0 107 87.9
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 1.9e-47 193.0 128 75.8
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.9e-47 193.0 102 89.2
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 4.2e-47 191.8 101 92.1
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 4.2e-47 191.8 167 64.7
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 5.4e-47 191.4 111 82.9
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 7.1e-47 191.0 164 62.2
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 7.1e-47 191.0 108 85.2
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 9.3e-47 190.7 108 85.2
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 1.2e-46 190.3 108 86.1
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 1.6e-46 189.9 103 89.3
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 2.1e-46 189.5 104 88.5
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 2.7e-46 189.1 125 75.2
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 2.7e-46 189.1 105 87.6
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 3.5e-46 188.7 108 84.3
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 3.5e-46 188.7 108 84.3
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 3.5e-46 188.7 108 84.3
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 3.5e-46 188.7 108 84.3
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 3.5e-46 188.7 108 84.3
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 3.5e-46 188.7 108 84.3
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 3.5e-46 188.7 126 76.2
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 4.6e-46 188.3 102 89.2
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 4.6e-46 188.3 104 88.5
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 4.6e-46 188.3 104 88.5
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 4.6e-46 188.3 104 88.5
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 6.0e-46 188.0 102 89.2
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 7.8e-46 187.6 105 86.7
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 7.8e-46 187.6 105 86.7
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 7.8e-46 187.6 105 86.7
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 7.8e-46 187.6 102 89.2
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 7.8e-46 187.6 105 86.7
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 7.8e-46 187.6 105 86.7
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 7.8e-46 187.6 105 86.7
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 7.8e-46 187.6 105 86.7
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 7.8e-46 187.6 105 86.7
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 7.8e-46 187.6 102 89.2
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 7.8e-46 187.6 105 86.7
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 7.8e-46 187.6 160 65.0
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 7.8e-46 187.6 102 89.2
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 1.3e-45 186.8 113 81.4
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 1.3e-45 186.8 156 65.4
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 1.7e-45 186.4 105 85.7
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.7e-45 186.4 104 86.5
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 2.3e-45 186.0 103 88.3
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 6.6e-45 184.5 104 85.6
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 8.7e-45 184.1 103 87.4
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 8.7e-45 184.1 103 86.4
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 1.1e-44 183.7 144 64.6
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.5e-44 182.6 103 87.4
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 1.6e-43 179.9 108 79.6
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 4.8e-43 178.3 108 77.8
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 6.9e-42 174.5 113 78.8
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 6.9e-42 174.5 103 80.6
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 1.7e-40 169.9 110 75.5
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 5.1e-37 158.3 80 93.8
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 9.6e-36 154.1 97 74.2
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 9.0e-34 147.5 101 64.4
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.3e-32 143.7 101 63.4
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 1.7e-32 143.3 94 70.2
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 1.1e-31 140.6 97 63.9
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 3.2e-31 139.0 94 67.0
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 9.3e-31 137.5 123 61.0
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 8.7e-29 131.0 74 85.1
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 2.1e-27 126.3 108 61.1
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 2.5e-20 102.8 90 54.4
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 7.4e-20 101.3 88 60.2
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 1.2e-17 94.0 86 57.0
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 4.5e-17 92.0 53 84.9
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 2.2e-16 89.7 51 86.3
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 2.2e-16 89.7 51 86.3
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 5.7e-12 75.1 99 39.4


User provided reference genes

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