Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 6.4e-215 750.4 348 100.0
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 3.2e-174 615.1 341 81.2
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 2.7e-173 612.1 335 81.2
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 1.8e-172 609.4 339 79.9
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 4.8e-170 601.3 339 78.2
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 1.4e-169 599.7 340 78.5
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.4e-169 599.0 339 77.9
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.0e-169 598.2 338 78.7
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 5.3e-169 597.8 334 79.0
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 9.0e-169 597.0 341 77.7
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 2.0e-168 595.9 335 79.4
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.6e-168 595.5 338 79.0
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 7.6e-168 594.0 343 77.6
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 1.3e-167 593.2 343 78.1
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.7e-167 592.8 335 79.1
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 1.7e-167 592.8 340 78.2
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 2.2e-167 592.4 335 77.3
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.8e-167 591.7 339 78.5
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.9e-167 591.3 335 79.1
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.9e-167 591.3 335 79.1
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 8.4e-167 590.5 339 77.9
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 1.1e-166 590.1 340 77.1
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 1.4e-166 589.7 341 78.0
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 3.2e-166 588.6 341 77.7
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 4.2e-166 588.2 336 76.8
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 7.1e-166 587.4 335 77.9
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 7.1e-166 587.4 334 77.8
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 7.1e-166 587.4 335 76.1
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 7.1e-166 587.4 341 78.0
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 7.1e-166 587.4 334 77.8
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 1.2e-165 586.6 336 77.4
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 1.6e-165 586.3 334 77.8
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 4.6e-165 584.7 334 78.1
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 6.0e-165 584.3 340 77.1
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.8e-164 582.8 340 76.8
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.8e-164 582.8 340 76.8
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 1.8e-164 582.8 334 78.1
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 6.7e-164 580.9 334 77.2
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 8.7e-164 580.5 336 75.0
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 8.7e-164 580.5 334 78.7
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 8.7e-164 580.5 335 76.1
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 1.1e-163 580.1 334 77.5
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 1.5e-163 579.7 334 76.9
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 1.9e-163 579.3 341 75.4
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 3.3e-163 578.6 334 75.4
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 3.3e-163 578.6 334 77.5
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 3.3e-163 578.6 334 78.4
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 3.3e-163 578.6 334 76.0
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 4.3e-163 578.2 340 76.2
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 4.3e-163 578.2 339 75.8
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.3e-163 578.2 336 74.7
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 4.3e-163 578.2 340 75.3
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 5.7e-163 577.8 336 76.2
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 7.4e-163 577.4 334 78.7
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 1.3e-162 576.6 339 75.2
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.6e-162 576.2 336 74.4
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 2.1e-162 575.9 340 76.5
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 2.1e-162 575.9 342 77.2
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 2.8e-162 575.5 333 77.2
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 3.7e-162 575.1 334 77.8
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 4.8e-162 574.7 339 75.5
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 4.8e-162 574.7 338 76.6
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 8.2e-162 573.9 336 74.1
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 8.2e-162 573.9 335 76.1
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 8.2e-162 573.9 333 77.8
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 1.1e-161 573.5 342 73.7
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 1.4e-161 573.2 339 75.5
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 1.8e-161 572.8 340 74.7
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 1.8e-161 572.8 336 73.8
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 3.1e-161 572.0 334 77.2
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 3.1e-161 572.0 340 76.2
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 5.3e-161 571.2 339 74.9
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 5.3e-161 571.2 335 76.4
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.2e-160 570.1 334 77.2
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 1.5e-160 569.7 334 76.6
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 1.5e-160 569.7 335 75.5
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.0e-160 569.3 336 73.5
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 2.6e-160 568.9 340 74.4
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 4.5e-160 568.2 334 74.9
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 7.6e-160 567.4 341 75.1
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 2.9e-159 565.5 340 74.1
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 2.9e-159 565.5 335 74.6
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 5.0e-159 564.7 336 73.8
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 5.0e-159 564.7 334 74.3
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 1.1e-158 563.5 335 74.9
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 7.2e-158 560.8 334 74.6
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.2e-157 560.1 335 76.1
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 4.6e-157 558.1 336 74.1
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 6.1e-157 557.8 334 73.7
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 1.0e-156 557.0 334 73.7
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 1.0e-156 557.0 335 73.4
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.3e-156 556.6 335 74.3
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 2.3e-156 555.8 335 72.5
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 3.9e-156 555.1 334 73.4
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 3.3e-155 552.0 334 73.1
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 3.3e-155 552.0 334 73.1
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 3.3e-155 552.0 335 71.9
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 4.3e-155 551.6 334 73.7
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 2.2e-154 549.3 335 73.4
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 2.8e-154 548.9 334 75.1
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 1.4e-153 546.6 335 71.3
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 1.0e-151 540.4 335 70.7
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 5.5e-150 534.6 333 71.5
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 9.4e-150 533.9 334 69.8
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 7.9e-149 530.8 345 68.4
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 1.4e-148 530.0 337 70.9
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 3.0e-148 528.9 337 71.2
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.3e-146 523.5 341 71.8
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.7e-146 523.1 313 75.7
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 8.2e-146 520.8 335 67.2
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 1.4e-145 520.0 335 70.1
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 7.2e-142 507.7 282 77.3
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 1.0e-135 487.3 290 73.8
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 5.7e-131 471.5 336 62.8
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 9.7e-131 470.7 337 62.6
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.2e-130 469.5 335 65.7
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.2e-128 463.8 334 61.4
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 7.0e-121 438.0 343 59.5
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 6.6e-111 404.8 321 62.0
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 8.9e-100 367.9 215 75.3
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 1.7e-98 363.6 209 75.1
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 3.7e-98 362.5 212 75.0
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 4.0e-92 342.4 289 55.7
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 2.0e-91 340.1 339 50.1
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 2.1e-53 213.8 172 62.8
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 3.7e-45 186.4 314 39.2
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 3.3e-30 136.7 96 61.5
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 4.2e-25 119.8 80 65.0
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 6.1e-24 115.9 61 82.0
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.7e-10 71.2 99 39.4
CSS0018959 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D112597 9.8e-06 55.5 57 45.6


User provided reference genes

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