Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 1.4e-125 453.0 234 100.0
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 7.6e-87 324.3 235 68.9
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 7.1e-85 317.8 234 67.1
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 4.6e-84 315.1 233 65.2
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 1.3e-83 313.5 231 68.8
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 2.3e-83 312.8 236 66.9
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 3.3e-82 308.9 235 68.1
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 2.1e-81 306.2 235 67.2
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 2.8e-81 305.8 236 65.7
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 8.1e-81 304.3 234 65.0
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 5.3e-80 301.6 234 64.1
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 5.3e-80 301.6 235 65.1
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 6.9e-80 301.2 232 62.9
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.5e-79 300.1 234 64.1
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 3.4e-79 298.9 234 63.7
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 5.8e-79 298.1 234 63.7
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 7.6e-79 297.7 235 63.4
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 7.6e-79 297.7 234 63.2
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 4.9e-78 295.0 235 63.4
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 6.4e-78 294.7 235 63.0
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 8.4e-78 294.3 230 63.9
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 1.1e-77 293.9 234 63.7
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 4.2e-77 292.0 235 62.6
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 5.4e-77 291.6 231 61.5
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 9.3e-77 290.8 237 61.6
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 1.6e-76 290.0 234 62.4
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 3.5e-76 288.9 231 64.1
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 4.6e-76 288.5 234 62.4
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 6.0e-76 288.1 223 65.0
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 7.9e-76 287.7 235 59.6
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 1.3e-75 287.0 230 60.4
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 1.8e-75 286.6 234 59.8
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.8e-75 286.6 235 60.4
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 3.9e-75 285.4 234 62.0
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 5.1e-75 285.0 235 58.7
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 5.1e-75 285.0 235 62.1
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 6.7e-75 284.6 234 59.8
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 8.7e-75 284.3 239 62.3
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 1.5e-74 283.5 234 59.8
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 1.5e-74 283.5 239 60.7
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 1.5e-74 283.5 234 61.1
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 1.9e-74 283.1 234 60.7
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 1.9e-74 283.1 229 62.0
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 2.5e-74 282.7 235 62.6
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 4.3e-74 282.0 235 63.0
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 7.4e-74 281.2 235 58.3
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 7.4e-74 281.2 234 61.1
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 1.3e-73 280.4 234 58.5
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 1.6e-73 280.0 230 61.3
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 2.1e-73 279.6 234 58.5
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 2.1e-73 279.6 234 59.8
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 2.1e-73 279.6 231 60.2
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 2.8e-73 279.3 230 61.3
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 3.6e-73 278.9 239 57.3
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 6.2e-73 278.1 237 59.1
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 8.1e-73 277.7 235 60.0
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 1.1e-72 277.3 231 59.7
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 1.1e-72 277.3 234 61.1
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 2.4e-72 276.2 235 58.7
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 3.1e-72 275.8 234 59.0
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 3.1e-72 275.8 231 58.0
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 3.1e-72 275.8 234 58.5
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 5.3e-72 275.0 231 59.3
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 6.9e-72 274.6 232 58.6
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 1.2e-71 273.9 234 59.0
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 1.2e-71 273.9 234 59.8
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.5e-71 273.5 234 59.8
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 2.6e-71 272.7 230 60.4
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 5.8e-71 271.6 231 57.6
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 7.6e-71 271.2 231 58.0
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 7.6e-71 271.2 231 61.5
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 9.9e-71 270.8 234 59.0
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 9.9e-71 270.8 234 59.8
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 1.3e-70 270.4 234 56.8
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 1.7e-70 270.0 234 58.1
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.7e-70 270.0 234 59.4
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 2.2e-70 269.6 237 58.2
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 3.8e-70 268.9 237 57.8
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 4.9e-70 268.5 235 55.7
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 1.1e-69 267.3 234 56.8
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 3.2e-69 265.8 237 58.6
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 4.2e-69 265.4 234 56.0
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 9.3e-69 264.2 235 54.9
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 1.0e-67 260.8 235 54.0
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 1.8e-67 260.0 229 57.6
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 2.3e-67 259.6 236 55.5
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 3.0e-67 259.2 231 56.7
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 1.9e-66 256.5 230 55.2
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 2.5e-66 256.1 235 58.3
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 3.3e-66 255.8 232 55.6
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 5.6e-66 255.0 235 54.9
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 7.4e-66 254.6 235 57.4
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 6.2e-65 251.5 217 56.7
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 1.1e-64 250.8 229 55.5
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 1.4e-64 250.4 234 56.0
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.2e-63 247.3 235 54.5
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 7.6e-63 244.6 229 54.1
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 4.9e-62 241.9 235 52.8
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 1.9e-61 240.0 216 54.6
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 3.2e-61 239.2 235 51.9
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 6.7e-59 231.5 228 52.6
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.6e-57 226.9 183 62.3
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 2.1e-57 226.5 205 54.6
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 6.7e-51 204.9 170 62.4
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 1.0e-43 181.0 162 56.8
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 3.8e-38 162.5 135 56.3
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 6.3e-25 118.6 102 59.8
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 4.1e-24 115.9 235 35.7
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 2.0e-18 97.1 188 37.2
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 5.4e-16 89.0 224 28.6
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 5.4e-16 89.0 74 59.5
Mapoly0028s0045 Marchantia polymorpha HOM05D037891 ORTHO05D008297 4.1e-08 62.8 222 23.9
Pp3c7_25590 Physcomitrium patens HOM05D037891 ORTHO05D008297 1.6e-07 60.8 247 21.9


User provided reference genes

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