Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C97T4 Lonicera japonica HOM05D005690 ORTHO05D007075 1.6e-64 249.2 121 100.0
Hma1.2p1_2080F.1_g313490 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 3.0e-55 218.4 121 85.1
Hma1.2p1_0453F.1_g156020 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 4.0e-55 218.0 120 85.0
ECA232G2854 Erigeron canadensis HOM05D005690 ORTHO05D007075 6.7e-55 217.2 121 84.3
VMungo0464G0948 Vigna mungo HOM05D005690 ORTHO05D007075 2.0e-54 215.7 121 86.8
Phvul.004G075000 Phaseolus vulgaris HOM05D005690 ORTHO05D007075 5.7e-54 214.2 121 86.0
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 5.7e-54 214.2 121 86.0
Ciclev10032614m.g Citrus clementina HOM05D005690 ORTHO05D007075 1.3e-53 213.0 121 83.5
FvH4_7g20020 Fragaria vesca HOM05D005690 ORTHO05D007075 1.3e-53 213.0 121 82.6
FAN03G1698 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.3e-53 213.0 121 82.6
FAN06G0212 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.3e-53 213.0 121 82.6
HanXRQChr09g0246501 Helianthus annuus HOM05D005690 ORTHO05D007075 1.3e-53 213.0 121 81.8
HanXRQChr17g0563371 Helianthus annuus HOM05D005690 ORTHO05D007075 1.3e-53 213.0 121 81.8
FAN01G0973 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.7e-53 212.6 121 82.6
FAN10G0816 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.7e-53 212.6 121 82.6
RcHm_v2.0_Chr1g0363981 Rosa chinensis HOM05D005690 ORTHO05D007075 1.7e-53 212.6 121 82.6
Thecc.10G069500 Theobroma cacao HOM05D005690 ORTHO05D007075 2.2e-53 212.2 121 82.6
CANSAT56G3535 Cannabis sativa HOM05D005690 ORTHO05D007075 2.8e-53 211.8 121 82.6
Eucgr.J01111 Eucalyptus grandis HOM05D005690 ORTHO05D007075 2.8e-53 211.8 121 81.8
MBI05_g11579_MAGBIO Magnolia biondii HOM05D005690 ORTHO05D007075 2.8e-53 211.8 121 81.8
Manes.07G103000 Manihot esculenta HOM05D005690 ORTHO05D007075 2.8e-53 211.8 121 85.1
COL.COLO4_32034 Corchorus olitorius HOM05D005690 ORTHO05D007075 3.7e-53 211.5 121 84.3
Nn2g13015 Nelumbo nucifera HOM05D005690 ORTHO05D007075 3.7e-53 211.5 121 82.6
TPR.G36634 Trifolium pratense HOM05D005690 ORTHO05D007075 3.7e-53 211.5 121 83.5
ATR1159G074 Amborella trichopoda HOM05D005690 ORTHO05D007075 6.3e-53 210.7 121 81.8
Ca_04676_v3 Cicer arietinum L. HOM05D005690 ORTHO05D007075 6.3e-53 210.7 121 83.5
Glyma.17G183500 Glycine max HOM05D005690 ORTHO05D007075 6.3e-53 210.7 121 83.5
Atru.chr12.670 Acer truncatum HOM05D005690 ORTHO05D007075 8.2e-53 210.3 121 82.6
Atru.chr12.697 Acer truncatum HOM05D005690 ORTHO05D007075 8.2e-53 210.3 121 82.6
GSVIVG01016316001 Vitis vinifera HOM05D005690 ORTHO05D007075 1.1e-52 209.9 121 81.0
Haze_16926 Corylus avellana HOM05D005690 ORTHO05D007075 1.4e-52 209.5 121 83.5
Peaxi162Scf00108g00166 Petunia axillaris HOM05D005690 ORTHO05D007075 1.4e-52 209.5 121 83.5
Dinv11797 Davidia involucrata HOM05D005690 ORTHO05D007075 1.8e-52 209.1 121 81.8
Prupe.2G217200 Prunus persica HOM05D005690 ORTHO05D007075 1.8e-52 209.1 121 83.5
MSTRG.373 Avicennia marina HOM05D005690 ORTHO05D007075 3.1e-52 208.4 121 81.8
Cfa001602 Carpinus fangiana HOM05D005690 ORTHO05D007075 3.1e-52 208.4 121 82.6
Duzib114G0556 Durio zibethinus HOM05D005690 ORTHO05D007075 3.1e-52 208.4 121 81.0
Potri.010G219000 Populus trichocarpa HOM05D005690 ORTHO05D007075 4.1e-52 208.0 121 82.6
Potri.010G219400 Populus trichocarpa HOM05D005690 ORTHO05D007075 4.1e-52 208.0 121 82.6
CiPaw.02G175700 Carya illinoinensis HOM05D005690 ORTHO05D007075 5.3e-52 207.6 121 81.0
Nitab4.5_0000233g0230 Nicotiana tabacum HOM05D005690 ORTHO05D007075 5.3e-52 207.6 121 81.8
Nitab4.5_0012288g0020 Nicotiana tabacum HOM05D005690 ORTHO05D007075 5.3e-52 207.6 121 81.8
Sabra10G0169300 Salix brachista HOM05D005690 ORTHO05D007075 5.3e-52 207.6 121 82.6
Gorai.010G204700 Gossypium raimondii HOM05D005690 ORTHO05D007075 7.0e-52 207.2 121 81.0
Lsat_1_v5_gn_9_67140 Lactuca sativa HOM05D005690 ORTHO05D007075 7.0e-52 207.2 121 80.2
Cc02_g11390 Coffea canephora HOM05D005690 ORTHO05D007075 9.1e-52 206.8 121 80.2
MD07G1177900 Malus domestica HOM05D005690 ORTHO05D007075 9.1e-52 206.8 121 81.8
vmacro04884 Vaccinium macrocarpon HOM05D005690 ORTHO05D007075 9.1e-52 206.8 121 81.8
Lalb_Chr19g0129571 Lupinus albus HOM05D005690 ORTHO05D007075 1.2e-51 206.5 121 81.8
MD01G1111700 Malus domestica HOM05D005690 ORTHO05D007075 1.2e-51 206.5 121 82.6
Aa31LG9G7550 Aethionema arabicum HOM05D005690 ORTHO05D007075 2.0e-51 205.7 121 78.5
Gohir.A06G178200 Gossypium hirsutum HOM05D005690 ORTHO05D007075 2.0e-51 205.7 121 80.2
Gohir.D06G176800 Gossypium hirsutum HOM05D005690 ORTHO05D007075 2.7e-51 205.3 121 80.2
Nitab4.5_0000476g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 2.7e-51 205.3 121 82.6
TAR633G2147 Trochodendron aralioides HOM05D005690 ORTHO05D007075 2.7e-51 205.3 121 76.9
TAR636G2049 Trochodendron aralioides HOM05D005690 ORTHO05D007075 2.7e-51 205.3 121 81.0
Lj2g0014971 Lotus japonicus HOM05D005690 ORTHO05D007075 3.5e-51 204.9 121 83.5
arahy.Tifrunner.gnm1.ann1.08HL34 Arachis hypogaea HOM05D005690 ORTHO05D007075 4.5e-51 204.5 121 77.7
Medtr6g033405 Medicago truncatula HOM05D005690 ORTHO05D007075 4.5e-51 204.5 121 81.0
PGR044G2452 Punica granatum HOM05D005690 ORTHO05D007075 4.5e-51 204.5 121 78.5
arahy.Tifrunner.gnm1.ann1.8E9GH8 Arachis hypogaea HOM05D005690 ORTHO05D007075 5.9e-51 204.1 120 77.5
SGA_v2.0_scaffold28G12052 Striga asiatica HOM05D005690 ORTHO05D007075 5.9e-51 204.1 121 78.5
Sabra08G0029500 Salix brachista HOM05D005690 ORTHO05D007075 7.7e-51 203.8 121 81.0
Sc06g0001780 Simmondsia chinensis HOM05D005690 ORTHO05D007075 1.3e-50 203.0 121 81.0
MELO3C002879.2 Cucumis melo HOM05D005690 ORTHO05D007075 1.7e-50 202.6 121 77.7
Potri.008G042800 Populus trichocarpa HOM05D005690 ORTHO05D007075 1.7e-50 202.6 121 81.0
TWI38G1302 Tripterygium wilfordii HOM05D005690 ORTHO05D007075 1.7e-50 202.6 121 76.9
BcaB01g03881 Brassica carinata HOM05D005690 ORTHO05D007075 5.0e-50 201.1 121 78.5
BcaC01g05707 Brassica carinata HOM05D005690 ORTHO05D007075 5.0e-50 201.1 121 78.5
C03p22980 Brassica napus HOM05D005690 ORTHO05D007075 5.0e-50 201.1 121 78.5
QL08p056659 Quercus lobata HOM05D005690 ORTHO05D007075 5.0e-50 201.1 120 77.5
Sp4g18050 Schrenkiella parvula HOM05D005690 ORTHO05D007075 5.0e-50 201.1 121 78.5
A03p19730 Brassica napus HOM05D005690 ORTHO05D007075 6.5e-50 200.7 121 77.7
CAN.G694.84 Capsicum annuum HOM05D005690 ORTHO05D007075 6.5e-50 200.7 121 80.2
Carub.0004s1755 Capsella rubella HOM05D005690 ORTHO05D007075 8.5e-50 200.3 121 77.7
CARHR130040 Cardamine hirsuta HOM05D005690 ORTHO05D007075 8.5e-50 200.3 121 77.7
Nitab4.5_0009003g0010 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.1e-49 199.9 115 80.9
CsaV3_5G025890 Cucumis sativus L. HOM05D005690 ORTHO05D007075 1.9e-49 199.1 121 76.9
Peaxi162Scf01175g00023 Petunia axillaris HOM05D005690 ORTHO05D007075 1.9e-49 199.1 112 80.4
Sed0011214 Sechium edule HOM05D005690 ORTHO05D007075 2.5e-49 198.7 121 77.7
AL4G31900 Arabidopsis lyrata HOM05D005690 ORTHO05D007075 4.2e-49 198.0 121 76.0
Peaxi162Scf00108g00173 Petunia axillaris HOM05D005690 ORTHO05D007075 4.2e-49 198.0 119 78.2
C04p64770 Brassica napus HOM05D005690 ORTHO05D007075 5.5e-49 197.6 121 77.7
BolC4t27955H Brassica oleracea HOM05D005690 ORTHO05D007075 5.5e-49 197.6 121 77.7
Solyc05g056090.3 Solanum lycopersicum HOM05D005690 ORTHO05D007075 5.5e-49 197.6 121 78.5
Sopen05g034500 Solanum pennellii HOM05D005690 ORTHO05D007075 5.5e-49 197.6 121 78.5
Cpa.g.sc53.43 Carica papaya HOM05D005690 ORTHO05D007075 9.4e-49 196.8 121 78.5
Thhalv10017166m.g Eutrema salsugineum HOM05D005690 ORTHO05D007075 9.4e-49 196.8 121 76.0
PGSC0003DMG400023460 Solanum tuberosum HOM05D005690 ORTHO05D007075 1.6e-48 196.1 121 77.7
THA.LOC104802837 Tarenaya hassleriana HOM05D005690 ORTHO05D007075 1.6e-48 196.1 121 75.2
A04p27260 Brassica napus HOM05D005690 ORTHO05D007075 2.1e-48 195.7 121 76.9
BraA04t18224Z Brassica rapa HOM05D005690 ORTHO05D007075 2.1e-48 195.7 121 76.9
AT2G35790 Arabidopsis thaliana HOM05D005690 ORTHO05D007075 2.7e-48 195.3 121 76.0
Migut.F01989 Erythranthe guttata HOM05D005690 ORTHO05D007075 2.7e-48 195.3 121 76.9
Sed0019941 Sechium edule HOM05D005690 ORTHO05D007075 2.7e-48 195.3 106 83.0
unitig_0.g529 Utricularia gibba HOM05D005690 ORTHO05D007075 2.7e-48 195.3 121 75.2
BcaB06g28872 Brassica carinata HOM05D005690 ORTHO05D007075 4.7e-48 194.5 121 75.2
Rhsim03G0123000 Rhododendron simsii HOM05D005690 ORTHO05D007075 4.7e-48 194.5 116 75.9
HPP92_003607 Vanilla planifolia HOM05D005690 ORTHO05D007075 6.1e-48 194.1 121 72.7
EL10Ac2g03578 Beta vulgaris HOM05D005690 ORTHO05D007075 8.0e-48 193.7 121 76.0
AUR62020766 Chenopodium quinoa HOM05D005690 ORTHO05D007075 1.8e-47 192.6 121 76.0
AUR62027946 Chenopodium quinoa HOM05D005690 ORTHO05D007075 1.8e-47 192.6 121 76.0
Hund19342 Selenicereus undatus HOM05D005690 ORTHO05D007075 2.3e-47 192.2 121 76.0
CDE04G0636 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 3.0e-47 191.8 121 74.4
BcaC02g07668 Brassica carinata HOM05D005690 ORTHO05D007075 4.0e-47 191.4 121 76.9
Ah.16g108410 Amaranthus hybridus HOM05D005690 ORTHO05D007075 5.2e-47 191.0 121 75.2
Eucgr.J01110 Eucalyptus grandis HOM05D005690 ORTHO05D007075 2.0e-46 189.1 111 75.7
SalBow4G1295 Salvia bowleyana HOM05D005690 ORTHO05D007075 2.0e-46 189.1 109 77.1
Zm00001eb064810 Zea mays HOM05D005690 ORTHO05D007075 2.0e-46 189.1 121 74.4
Os03g0853800 Oryza sativa ssp. japonica HOM05D005690 ORTHO05D007075 2.6e-46 188.7 121 75.2
CDE07G1130 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 3.4e-46 188.3 121 72.7
BcaB01g03882 Brassica carinata HOM05D005690 ORTHO05D007075 5.7e-46 187.6 112 78.6
PSO384G2564 Papaver somniferum HOM05D005690 ORTHO05D007075 7.5e-46 187.2 121 73.6
PSO339G2382 Papaver somniferum HOM05D005690 ORTHO05D007075 3.7e-45 184.9 121 71.9
SalBow3G1299 Salvia bowleyana HOM05D005690 ORTHO05D007075 6.3e-45 184.1 121 71.1
Aqoxy6G02013 Aquilegia oxysepala HOM05D005690 ORTHO05D007075 2.4e-44 182.2 121 73.6
Psat1g099440 Pisum sativum HOM05D005690 ORTHO05D007075 2.2e-42 175.6 99 82.8
CiPaw.01G275500 Carya illinoinensis HOM05D005690 ORTHO05D007075 8.5e-42 173.7 117 71.8
SEGI_15078 Sequoiadendron giganteum HOM05D005690 ORTHO05D007075 1.1e-41 173.3 121 66.9
ClCG09G020510 Citrullus lanatus HOM05D005690 ORTHO05D007075 1.8e-39 166.0 95 76.8
Nitab4.5_0003072g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 2.5e-33 145.6 111 62.2
AagrBONN_evm.TU.Sc2ySwM_362.1612 Anthoceros agrestis HOM05D005690 ORTHO05D007075 1.4e-31 139.8 106 58.5
Psat2g052960 Pisum sativum HOM05D004553 ORTHO05D005426 3.0e-31 138.7 86 74.4
Mapoly0033s0041 Marchantia polymorpha HOM05D005690 ORTHO05D007075 4.0e-31 138.3 108 56.5
Pp3c10_15170 Physcomitrium patens HOM05D005690 ORTHO05D007075 8.9e-31 137.1 104 56.7
CSS0000246 Camellia sinensis var. sinensis HOM05D005690 ORTHO05D007075 7.5e-30 134.0 79 78.5
Mapoly0033s0042 Marchantia polymorpha HOM05D005690 ORTHO05D007075 4.1e-28 128.3 107 51.4
Lalb_Chr01g0010161 Lupinus albus HOM05D005690 ORTHO05D007075 2.1e-24 115.9 69 81.2
SMO239G0063 Selaginella moellendorffii HOM05D005690 ORTHO05D007075 4.4e-22 108.2 108 42.6
CDE07G0610 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 1.3e-13 80.1 117 44.4
Cre12.g540051 Chlamydomonas reinhardtii HOM05D005690 ORTHO05D007075 2.7e-11 72.4 103 32.0
MCO03G451 Micromonas commoda HOM05D005690 ORTHO05D007075 1.1e-07 60.5 92 37.0
HanXRQChr10g0292531 Helianthus annuus HOM05D005690 ORTHO05D007075 4.0e-07 58.5 66 47.0


User provided reference genes

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