Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 2.3e-88 328.9 177 100.0
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 1.3e-27 127.1 170 54.1
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 5.8e-23 111.7 180 47.8
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 1.4e-21 107.1 181 45.3
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 7.9e-20 101.3 175 43.4
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 2.3e-19 99.8 183 42.6
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 9.6e-18 94.4 179 44.7
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 1.3e-17 94.0 149 44.3
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 2.8e-17 92.8 174 42.5
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 3.1e-16 89.4 164 42.7
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 5.3e-16 88.6 168 43.5
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 1.2e-15 87.4 153 43.8
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 2.6e-15 86.3 157 42.0
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 2.6e-15 86.3 177 40.1
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.7e-14 83.6 157 41.4
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 6.5e-14 81.6 178 41.6
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 6.5e-14 81.6 178 38.8
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 8.4e-14 81.3 171 39.8
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.4e-13 80.5 178 41.6
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.9e-13 80.1 169 42.0
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 2.5e-13 79.7 178 41.0
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.5e-13 79.7 178 41.0
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 5.5e-13 78.6 161 37.3
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 1.6e-12 77.0 169 38.5
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 4.6e-12 75.5 163 40.5
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 6.1e-12 75.1 161 39.8
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.0e-11 74.3 181 39.2
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 1.3e-11 73.9 132 44.7
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 1.8e-11 73.6 164 37.2
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 2.3e-11 73.2 173 39.9
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 3.0e-11 72.8 173 36.4
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 2.5e-10 69.7 143 41.3
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 2.5e-10 69.7 164 37.8
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 2.5e-10 69.7 177 35.0
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 3.3e-10 69.3 172 33.7
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 3.3e-10 69.3 130 42.3
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 4.3e-10 68.9 172 34.3
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 5.7e-10 68.6 173 38.2
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 7.4e-10 68.2 170 36.5
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 9.7e-10 67.8 139 36.0
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.6e-09 67.0 171 33.3
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 2.2e-09 66.6 130 41.5
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 2.8e-09 66.2 161 38.5
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 3.7e-09 65.9 122 41.0
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 3.7e-09 65.9 187 36.4
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 6.3e-09 65.1 163 37.4
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 1.4e-08 63.9 155 34.2
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.4e-08 63.2 150 38.7
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 3.1e-08 62.8 176 34.7
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 3.1e-08 62.8 152 39.5
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 3.1e-08 62.8 160 38.1
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 3.1e-08 62.8 118 40.7
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 4.1e-08 62.4 179 33.0
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 5.3e-08 62.0 144 41.7
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 1.2e-07 60.8 169 32.0
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 2.0e-07 60.1 175 33.7
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 4.5e-07 58.9 131 35.9
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 4.5e-07 58.9 191 30.9
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 4.5e-07 58.9 72 54.2
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 4.5e-07 58.9 174 33.9
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 5.9e-07 58.5 168 35.1
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 5.9e-07 58.5 141 34.0
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 7.7e-07 58.2 157 36.9
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 1.0e-06 57.8 181 32.6
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 1.7e-06 57.0 165 32.1
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 1.7e-06 57.0 180 35.0
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 2.2e-06 56.6 66 51.5
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 2.9e-06 56.2 136 37.5
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 8.5e-06 54.7 164 31.1


User provided reference genes

Program Settings