Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C609G9 Lonicera japonica HOM05D002054 ORTHO05D004936 1.3e-54 216.1 107 100.0
Dinv30217 Davidia involucrata HOM05D002054 ORTHO05D004936 1.3e-30 136.3 106 72.6
Actinidia14644 Actinidia chinensis HOM05D002054 ORTHO05D004936 1.7e-30 136.0 108 72.2
CSS0040563 Camellia sinensis var. sinensis HOM05D002054 ORTHO05D004936 3.9e-30 134.8 106 71.7
CSS0008422 Camellia sinensis var. sinensis HOM05D002054 ORTHO05D004936 1.9e-29 132.5 106 71.7
CSS0015303 Camellia sinensis var. sinensis HOM05D002054 ORTHO05D004936 1.9e-29 132.5 106 71.7
CiPaw.08G016200 Carya illinoinensis HOM05D002054 ORTHO05D004936 2.8e-28 128.6 102 71.6
GSVIVG01035731001 Vitis vinifera HOM05D002054 ORTHO05D004936 1.4e-27 126.3 106 69.8
vmacro05452 Vaccinium macrocarpon HOM05D002054 ORTHO05D004936 2.4e-27 125.6 104 66.3
Cfa013215 Carpinus fangiana HOM05D002054 ORTHO05D004936 4.0e-27 124.8 102 68.6
Cc08_g08260 Coffea canephora HOM05D002054 ORTHO05D004936 4.0e-27 124.8 106 64.2
Cpa.g.sc91.4 Carica papaya HOM05D002054 ORTHO05D004936 6.9e-27 124.0 104 66.3
Haze_21629 Corylus avellana HOM05D002054 ORTHO05D004936 6.9e-27 124.0 102 67.6
Rhsim07G0154500 Rhododendron simsii HOM05D002054 ORTHO05D004936 9.0e-27 123.6 104 66.3
QL12p031184 Quercus lobata HOM05D002054 ORTHO05D004936 2.6e-26 122.1 106 66.0
CiPaw.07G217100 Carya illinoinensis HOM05D002054 ORTHO05D004936 3.4e-26 121.7 107 67.3
Atru.chr7.2318 Acer truncatum HOM05D002054 ORTHO05D004936 5.8e-26 120.9 105 63.8
MSTRG.25879 Avicennia marina HOM05D002054 ORTHO05D004936 1.3e-25 119.8 105 66.7
Manes.16G068600 Manihot esculenta HOM05D002054 ORTHO05D004936 1.7e-25 119.4 105 68.6
Solyc08g067920.3 Solanum lycopersicum HOM05D002054 ORTHO05D004936 2.9e-25 118.6 105 69.5
Sopen08g021830 Solanum pennellii HOM05D002054 ORTHO05D004936 6.4e-25 117.5 105 68.6
Nitab4.5_0005258g0030 Nicotiana tabacum HOM05D002054 ORTHO05D004936 1.1e-24 116.7 102 68.6
Sc09g0008880 Simmondsia chinensis HOM05D002054 ORTHO05D004936 1.4e-24 116.3 104 63.5
Ciclev10007235m.g Citrus clementina HOM05D002054 ORTHO05D004936 1.9e-24 115.9 102 61.8
Potri.006G246200 Populus trichocarpa HOM05D002054 ORTHO05D004936 1.9e-24 115.9 107 63.6
Duzib150G0930 Durio zibethinus HOM05D002054 ORTHO05D004936 2.4e-24 115.5 105 63.8
ClCG05G017240 Citrullus lanatus HOM05D002054 ORTHO05D004936 4.2e-24 114.8 105 62.9
Prupe.1G466100 Prunus persica HOM05D002054 ORTHO05D004936 5.4e-24 114.4 103 63.1
Peaxi162Scf00105g01221 Petunia axillaris HOM05D002054 ORTHO05D004936 7.1e-24 114.0 99 67.7
TAR383G0292 Trochodendron aralioides HOM05D002054 ORTHO05D004936 7.1e-24 114.0 110 62.7
Nn2g11816 Nelumbo nucifera HOM05D002054 ORTHO05D004936 9.3e-24 113.6 104 63.5
arahy.Tifrunner.gnm1.ann1.LJCF3U Arachis hypogaea HOM05D002054 ORTHO05D004936 1.2e-23 113.2 103 64.1
arahy.Tifrunner.gnm1.ann1.WIN44D Arachis hypogaea HOM05D002054 ORTHO05D004936 1.2e-23 113.2 103 64.1
MELO3C003664.2 Cucumis melo HOM05D002054 ORTHO05D004936 1.2e-23 113.2 105 61.9
CsaV3_3G046720 Cucumis sativus L. HOM05D002054 ORTHO05D004936 1.2e-23 113.2 105 61.9
Nn8g39260 Nelumbo nucifera HOM05D002054 ORTHO05D004936 1.6e-23 112.8 107 63.6
MD15G1114600 Malus domestica HOM05D002054 ORTHO05D004936 2.7e-23 112.1 108 58.3
TAR624G1047 Trochodendron aralioides HOM05D002054 ORTHO05D004936 2.7e-23 112.1 109 64.2
Sabra18G0035700 Salix brachista HOM05D002054 ORTHO05D004936 3.5e-23 111.7 107 61.7
COL.COLO4_24072 Corchorus olitorius HOM05D002054 ORTHO05D004936 6.0e-23 110.9 107 58.9
CAN.G679.11 Capsicum annuum HOM05D002054 ORTHO05D004936 7.9e-23 110.5 100 66.0
PSO782G2545 Papaver somniferum HOM05D002054 ORTHO05D004936 7.9e-23 110.5 103 60.2
Sabra06G0192700 Salix brachista HOM05D002054 ORTHO05D004936 7.9e-23 110.5 102 61.8
Actinidia15714 Actinidia chinensis HOM05D002054 ORTHO05D004936 1.3e-22 109.8 108 62.0
Lj5g0002104 Lotus japonicus HOM05D002054 ORTHO05D004936 3.0e-22 108.6 105 64.8
PSO063G3196 Papaver somniferum HOM05D002054 ORTHO05D004936 3.0e-22 108.6 105 59.0
VMungo1309G1581 Vigna mungo HOM05D002054 ORTHO05D004936 3.9e-22 108.2 105 62.9
TAR636G2779 Trochodendron aralioides HOM05D002054 ORTHO05D004936 5.1e-22 107.8 110 61.8
Aqoxy7G01826 Aquilegia oxysepala HOM05D002054 ORTHO05D004936 6.7e-22 107.5 107 58.9
Potri.018G034900 Populus trichocarpa HOM05D002054 ORTHO05D004936 8.7e-22 107.1 102 59.8
MD08G1135600 Malus domestica HOM05D002054 ORTHO05D004936 1.1e-21 106.7 108 57.4
Thecc.09G143700 Theobroma cacao HOM05D002054 ORTHO05D004936 1.1e-21 106.7 107 58.9
Oeu027165.1 Olea europaea HOM05D002054 ORTHO05D004936 1.5e-21 106.3 101 64.4
TWI34G0955 Tripterygium wilfordii HOM05D002054 ORTHO05D004936 2.5e-21 105.5 104 62.5
Gohir.A13G203700 Gossypium hirsutum HOM05D002054 ORTHO05D004936 3.3e-21 105.1 107 57.9
Duzib187G1611 Durio zibethinus HOM05D002054 ORTHO05D004936 4.3e-21 104.8 108 55.6
TWI63G0485 Tripterygium wilfordii HOM05D002054 ORTHO05D004936 4.3e-21 104.8 104 60.6
Phvul.009G098700 Phaseolus vulgaris HOM05D002054 ORTHO05D004936 5.6e-21 104.4 103 60.2
Gohir.D13G209000 Gossypium hirsutum HOM05D002054 ORTHO05D004936 7.4e-21 104.0 107 57.0
Gorai.013G238100 Gossypium raimondii HOM05D002054 ORTHO05D004936 7.4e-21 104.0 107 57.0
Oeu045173.1 Olea europaea HOM05D002054 ORTHO05D004936 1.3e-20 103.2 101 59.4
Gohir.A07G038500 Gossypium hirsutum HOM05D002054 ORTHO05D004936 1.1e-19 100.1 107 58.9
Gohir.D07G042600 Gossypium hirsutum HOM05D002054 ORTHO05D004936 1.4e-19 99.8 107 57.9
Gorai.001G045600 Gossypium raimondii HOM05D002054 ORTHO05D004936 1.4e-19 99.8 107 57.9
Ca_12906_v3 Cicer arietinum L. HOM05D002054 ORTHO05D004936 1.8e-19 99.4 105 59.0
Duzib168G1204 Durio zibethinus HOM05D002054 ORTHO05D004936 1.8e-19 99.4 107 56.1
Lalb_Chr08g0243761 Lupinus albus HOM05D002054 ORTHO05D004936 4.0e-19 98.2 103 57.3
Nitab4.5_0000125g0100 Nicotiana tabacum HOM05D002054 ORTHO05D004936 1.5e-18 96.3 103 60.2
Lalb_Chr23g0268991 Lupinus albus HOM05D002054 ORTHO05D004936 4.5e-18 94.7 98 55.1
Sed0018977 Sechium edule HOM05D002054 ORTHO05D004936 7.6e-18 94.0 101 55.4
RcHm_v2.0_Chr6g0312671 Rosa chinensis HOM05D002054 ORTHO05D004936 9.9e-18 93.6 99 55.6
CANSAT25G1939 Cannabis sativa HOM05D002054 ORTHO05D004936 1.3e-17 93.2 110 55.5
MSTRG.14005 Avicennia marina HOM05D002054 ORTHO05D004936 8.4e-17 90.5 103 52.4
MSTRG.1650 Avicennia marina HOM05D002054 ORTHO05D004936 9.3e-16 87.0 106 53.8
HanXRQChr12g0381921 Helianthus annuus HOM05D002054 ORTHO05D004936 9.3e-16 87.0 65 70.8
ECA246G4952 Erigeron canadensis HOM05D002054 ORTHO05D004936 1.2e-15 86.7 59 76.3
Lsat_1_v5_gn_5_45480 Lactuca sativa HOM05D002054 ORTHO05D004936 1.2e-15 86.7 101 55.4
FAN15G1142 Fragaria x ananassa HOM05D002054 ORTHO05D004936 2.1e-15 85.9 99 50.5
AUR62024831 Chenopodium quinoa HOM05D002054 ORTHO05D004936 2.7e-15 85.5 83 55.4
FAN24G2685 Fragaria x ananassa HOM05D002054 ORTHO05D004936 2.7e-15 85.5 99 50.5
FAN27G0259 Fragaria x ananassa HOM05D002054 ORTHO05D004936 2.7e-15 85.5 99 50.5
Migut.A00268 Erythranthe guttata HOM05D002054 ORTHO05D004936 3.5e-15 85.1 91 53.8
PGR044G1488 Punica granatum HOM05D002054 ORTHO05D004936 3.5e-15 85.1 65 64.6
SalBow4G1030 Salvia bowleyana HOM05D002054 ORTHO05D004936 6.0e-15 84.3 98 52.0
AUR62032386 Chenopodium quinoa HOM05D002054 ORTHO05D004936 7.9e-15 84.0 83 54.2
FAN20G1010 Fragaria x ananassa HOM05D002054 ORTHO05D004936 7.9e-15 84.0 99 49.5
FvH4_2g30210 Fragaria vesca HOM05D002054 ORTHO05D004936 1.3e-14 83.2 99 49.5
MBI01_g03365_MAGBIO Magnolia biondii HOM05D002054 ORTHO05D004936 1.8e-14 82.8 99 50.5
AT4G32620 Arabidopsis thaliana HOM05D002054 ORTHO05D004936 3.9e-14 81.6 106 45.3
EL10Ac2g02532 Beta vulgaris HOM05D002054 ORTHO05D004936 3.9e-14 81.6 85 52.9
CDE04G2426 Ceratophyllum demersum HOM05D002054 ORTHO05D004936 3.9e-14 81.6 90 50.0
Hund25656 Selenicereus undatus HOM05D002054 ORTHO05D004936 3.9e-14 81.6 99 48.5
Ah.12g063070 Amaranthus hybridus HOM05D002054 ORTHO05D004936 1.1e-13 80.1 82 53.7
Eucgr.C01819 Eucalyptus grandis HOM05D002054 ORTHO05D004936 1.5e-13 79.7 86 54.7
Sed0026318 Sechium edule HOM05D002054 ORTHO05D004936 2.5e-13 79.0 84 57.1
Zm00001eb337050 Zea mays HOM05D002054 ORTHO05D004936 3.3e-13 78.6 97 48.5
Eucgr.C01559 Eucalyptus grandis HOM05D002054 ORTHO05D004936 4.3e-13 78.2 87 54.0
Eucgr.C01845 Eucalyptus grandis HOM05D002054 ORTHO05D004936 4.3e-13 78.2 87 54.0
Eucgr.L00986 Eucalyptus grandis HOM05D002054 ORTHO05D004936 4.3e-13 78.2 87 54.0
CARHR240590 Cardamine hirsuta HOM05D002054 ORTHO05D004936 5.6e-13 77.8 104 45.2
Thhalv10024206m.g Eutrema salsugineum HOM05D002054 ORTHO05D004936 5.6e-13 77.8 104 46.2
AL7G19140 Arabidopsis lyrata HOM05D002054 ORTHO05D004936 1.3e-12 76.6 104 45.2
Eucgr.C01562 Eucalyptus grandis HOM05D002054 ORTHO05D004936 1.3e-12 76.6 87 52.9
Sp7g30390 Schrenkiella parvula HOM05D002054 ORTHO05D004936 1.3e-12 76.6 108 45.4
Carub.0007s0792 Capsella rubella HOM05D002054 ORTHO05D004936 1.6e-12 76.3 104 45.2
SGA_v2.0_scaffold448G51787 Striga asiatica HOM05D002054 ORTHO05D004936 2.1e-12 75.9 61 65.6
Psat6g031120 Pisum sativum HOM05D002054 ORTHO05D004936 2.8e-12 75.5 101 49.5
Eucgr.C01848 Eucalyptus grandis HOM05D002054 ORTHO05D004936 1.4e-11 73.2 97 47.4
Zm00001eb122250 Zea mays HOM05D002054 ORTHO05D004936 1.4e-11 73.2 97 46.4
DCAR_003068 Daucus carota HOM05D002054 ORTHO05D004936 1.8e-11 72.8 97 46.4
Lalb_Chr22g0361331 Lupinus albus HOM05D002054 ORTHO05D004936 5.3e-11 71.2 102 46.1
SGA_v2.0_scaffold27G11503 Striga asiatica HOM05D002054 ORTHO05D004936 6.9e-11 70.9 55 65.5
DCAR_007679 Daucus carota HOM05D002054 ORTHO05D004936 9.0e-11 70.5 96 51.0
Glyma.14G129700 Glycine max HOM05D002054 ORTHO05D004936 1.2e-10 70.1 98 48.0
VMungo0647G1247 Vigna mungo HOM05D002054 ORTHO05D004936 1.2e-10 70.1 99 45.5
CDE02G2261 Ceratophyllum demersum HOM05D002054 ORTHO05D004936 1.5e-10 69.7 102 44.1
Phvul.001G055900 Phaseolus vulgaris HOM05D002054 ORTHO05D004936 1.5e-10 69.7 99 45.5
TPR.G20101 Trifolium pratense HOM05D002054 ORTHO05D004936 1.5e-10 69.7 101 45.5
unitig_747.g21877 Utricularia gibba HOM05D002054 ORTHO05D004936 2.0e-10 69.3 55 65.5
Glyma.14G129600 Glycine max HOM05D002054 ORTHO05D004936 3.4e-10 68.6 98 45.9
HPP92_009885 Vanilla planifolia HOM05D002054 ORTHO05D004936 7.6e-10 67.4 59 61.0
Glyma.17G204700 Glycine max HOM05D002054 ORTHO05D004936 1.0e-09 67.0 90 46.7
THA.LOC104819891 Tarenaya hassleriana HOM05D002054 ORTHO05D004936 1.0e-09 67.0 104 44.2
ATR0037G018 Amborella trichopoda HOM05D002054 ORTHO05D004936 1.7e-09 66.2 63 52.4
unitig_0.g2812 Utricularia gibba HOM05D002054 ORTHO05D004936 2.2e-09 65.9 80 46.2
Glyma.17G204300 Glycine max HOM05D002054 ORTHO05D004936 2.9e-09 65.5 90 45.6
Aa31sc102G50 Aethionema arabicum HOM05D002054 ORTHO05D004936 4.9e-09 64.7 90 40.0
Medtr1g010290 Medicago truncatula HOM05D002054 ORTHO05D004936 5.5e-08 61.2 106 40.6
A01p05730 Brassica napus HOM05D002054 ORTHO05D004936 9.3e-08 60.5 97 41.2
BolC1t00629H Brassica oleracea HOM05D002054 ORTHO05D004936 9.3e-08 60.5 97 41.2
BcaC09g52055 Brassica carinata HOM05D002054 ORTHO05D004936 1.2e-07 60.1 97 41.2
C01p06310 Brassica napus HOM05D002054 ORTHO05D004936 1.2e-07 60.1 97 41.2
BraA01t00543Z Brassica rapa HOM05D002054 ORTHO05D004936 1.2e-07 60.1 97 41.2
SHI18618 Sapria himalayana HOM05D002054 ORTHO05D004936 6.0e-07 57.8 81 48.1
Os01g0179500 Oryza sativa ssp. japonica HOM05D002054 ORTHO05D004936 1.8e-06 56.2 97 41.2


User provided reference genes

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