Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 8.7e-85 317.0 168 100.0
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 1.6e-83 312.8 168 98.2
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 2.5e-63 245.7 159 80.5
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.2e-62 243.4 160 80.0
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 2.1e-62 242.7 161 80.1
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 7.9e-62 240.7 155 82.6
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 1.0e-61 240.4 159 79.9
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 3.9e-61 238.4 156 80.8
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 5.1e-61 238.0 159 79.2
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 7.4e-60 234.2 159 79.2
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 9.7e-60 233.8 159 76.7
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 1.6e-59 233.0 159 78.0
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 3.7e-59 231.9 159 76.7
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 4.8e-59 231.5 159 76.7
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 8.2e-59 230.7 159 76.1
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 8.2e-59 230.7 159 76.1
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 8.2e-59 230.7 158 73.4
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 1.4e-58 229.9 159 76.1
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 1.8e-58 229.6 159 76.1
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 3.1e-58 228.8 159 76.1
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 6.9e-58 227.6 156 75.6
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.2e-57 226.9 156 75.0
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 1.2e-57 226.9 156 78.2
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 1.5e-57 226.5 154 78.6
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 1.5e-57 226.5 165 73.3
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.5e-57 226.5 156 75.0
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 2.0e-57 226.1 159 75.5
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 2.6e-57 225.7 161 73.3
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 2.6e-57 225.7 156 76.9
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 2.6e-57 225.7 159 73.6
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.4e-57 225.3 156 74.4
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 5.9e-57 224.6 168 70.2
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 5.9e-57 224.6 159 72.3
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 7.7e-57 224.2 159 73.6
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 1.0e-56 223.8 159 76.1
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.3e-56 223.4 159 73.0
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 1.7e-56 223.0 157 74.5
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 1.7e-56 223.0 158 75.3
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 2.2e-56 222.6 159 73.6
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 2.2e-56 222.6 169 71.6
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 2.9e-56 222.2 160 73.8
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 5.0e-56 221.5 156 74.4
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 1.4e-55 219.9 159 70.4
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 1.9e-55 219.5 156 74.4
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 1.9e-55 219.5 160 71.9
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 4.2e-55 218.4 161 72.0
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 5.5e-55 218.0 159 73.0
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 1.2e-54 216.9 161 69.6
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 1.6e-54 216.5 159 71.1
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 2.7e-54 215.7 159 70.4
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 1.0e-53 213.8 162 68.5
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 1.8e-53 213.0 156 69.2
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 1.8e-53 213.0 160 72.5
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 3.9e-53 211.8 153 71.9
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 5.1e-53 211.5 155 70.3
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 6.7e-53 211.1 156 70.5
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 1.1e-52 210.3 159 67.3
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 1.5e-52 209.9 155 68.4
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 1.5e-52 209.9 156 70.5
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 2.0e-52 209.5 158 67.1
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 3.3e-52 208.8 159 67.3
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 5.7e-52 208.0 161 67.7
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 7.4e-52 207.6 137 81.0
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 9.7e-52 207.2 188 62.2
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 2.2e-51 206.1 159 67.3
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 3.7e-51 205.3 161 67.1
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 3.7e-51 205.3 161 65.8
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 2.4e-50 202.6 154 68.2
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 2.4e-50 202.6 159 66.7
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 5.3e-50 201.4 159 64.8
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 6.9e-50 201.1 178 62.4
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 6.9e-50 201.1 152 67.1
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 1.5e-49 199.9 161 64.0
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 2.6e-49 199.1 149 67.1
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 7.7e-49 197.6 161 63.4
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 1.3e-48 196.8 152 66.4
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 8.5e-48 194.1 155 65.2
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 1.9e-47 193.0 162 63.6
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 2.5e-47 192.6 170 61.8
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 4.2e-47 191.8 163 62.0
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 4.2e-47 191.8 159 67.9
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 9.4e-47 190.7 112 86.6
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 4.7e-46 188.3 156 61.5
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 6.1e-46 188.0 159 62.3
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 3.0e-45 185.7 146 67.1
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 1.1e-44 183.7 156 60.9
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 1.1e-44 183.7 156 60.9
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 2.0e-44 183.0 127 78.7
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 4.4e-44 181.8 113 80.5
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 1.8e-42 176.4 115 75.7
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 2.4e-42 176.0 123 79.7
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 2.4e-42 176.0 118 73.7
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 4.1e-42 175.3 117 74.4
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 9.1e-42 174.1 114 75.4
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 1.2e-41 173.7 117 74.4
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 5.9e-41 171.4 161 60.9
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 5.0e-40 168.3 101 79.2
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 1.0e-37 160.6 124 71.0
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 2.3e-37 159.5 147 56.5
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 8.8e-37 157.5 124 69.4
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 4.4e-36 155.2 177 54.2
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 5.7e-36 154.8 121 71.9
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 2.4e-34 149.4 159 54.1
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 4.1e-34 148.7 123 67.5
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 1.0e-32 144.1 152 51.3
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 2.2e-32 142.9 126 61.1
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.0e-29 134.0 125 56.8
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 4.0e-29 132.1 152 50.0
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 5.4e-26 121.7 146 46.6
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 2.9e-24 115.9 143 48.3
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 6.1e-22 108.2 70 72.9
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 1.8e-21 106.7 99 57.6
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 2.9e-16 89.4 98 45.9
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 2.9e-11 72.8 112 38.4
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 3.0e-08 62.8 37 73.0


User provided reference genes

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