Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C533T0 Lonicera japonica HOM05D000123 ORTHO05D000064 3.2e-54 214.9 114 100.0
Lj8P532T10 Lonicera japonica HOM05D000123 ORTHO05D000064 9.8e-40 166.8 160 61.2
Lj8C533G1 Lonicera japonica HOM05D000123 ORTHO05D000064 4.6e-37 157.9 161 59.6
Lj8P531T41 Lonicera japonica HOM05D000123 ORTHO05D000064 1.1e-35 153.3 160 56.9
Lj8P532T11 Lonicera japonica HOM05D000123 ORTHO05D000064 2.5e-35 152.1 160 55.6
Lj8P532T12 Lonicera japonica HOM05D000123 ORTHO05D000064 8.1e-34 147.1 160 55.6
Cfa017967 Carpinus fangiana HOM05D000123 ORTHO05D000064 1.2e-13 80.1 158 34.8
Haze_18164 Corylus avellana HOM05D000123 ORTHO05D000064 3.5e-13 78.6 162 34.6
Hma1.2p1_0544F.1_g175700 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 6.0e-13 77.8 132 40.2
QL04p071344 Quercus lobata HOM05D003037 ORTHO05D000064 6.0e-13 77.8 131 38.2
QL11p022570 Quercus lobata HOM05D000123 ORTHO05D000064 1.0e-12 77.0 133 37.6
CiPaw.15G037500 Carya illinoinensis HOM05D000123 ORTHO05D000064 1.3e-12 76.6 158 34.8
COL.COLO4_21078 Corchorus olitorius HOM05D000123 ORTHO05D000064 1.9e-11 72.8 148 33.1
Gorai.013G220400 Gossypium raimondii HOM05D000123 ORTHO05D000064 1.9e-11 72.8 153 35.9
Gohir.A13G187500 Gossypium hirsutum HOM05D000123 ORTHO05D000064 3.3e-11 72.0 153 35.9
Gohir.D13G194400 Gossypium hirsutum HOM05D000123 ORTHO05D000064 5.6e-11 71.2 153 33.3
Thecc.09G056300 Theobroma cacao HOM05D000123 ORTHO05D000064 1.3e-10 70.1 158 33.5
Duzib168G0691 Durio zibethinus HOM05D000123 ORTHO05D000064 2.1e-10 69.3 157 33.1
Eucgr.C03056 Eucalyptus grandis HOM05D000123 ORTHO05D000064 2.8e-10 68.9 141 39.0
CSS0014079 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 3.6e-10 68.6 151 31.1
Duzib187G0851 Durio zibethinus HOM05D000123 ORTHO05D000064 3.6e-10 68.6 156 31.4
QL02p000947 Quercus lobata HOM05D000123 ORTHO05D000064 8.1e-10 67.4 162 30.2
Hma1.2p1_0544F.1_g175690 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 1.8e-09 66.2 133 33.8
Sabra06G0175500 Salix brachista HOM05D000123 ORTHO05D000064 9.0e-09 63.9 162 31.5
MD08G1064100 Malus domestica HOM05D000123 ORTHO05D000064 2.6e-08 62.4 159 30.2
AUR62009126 Chenopodium quinoa HOM05D000123 ORTHO05D000064 9.9e-08 60.5 154 33.8
Potri.006G226800 Populus trichocarpa HOM05D000123 ORTHO05D000064 1.3e-07 60.1 162 30.9
MD15G1057700 Malus domestica HOM05D000123 ORTHO05D000064 1.7e-07 59.7 157 32.5
Oeu013997.1 Olea europaea HOM05D000123 ORTHO05D000064 2.9e-07 58.9 159 31.4
Prupe.1G410400 Prunus persica HOM05D000123 ORTHO05D000064 2.9e-07 58.9 160 29.4
Lalb_Chr08g0245011 Lupinus albus HOM05D000123 ORTHO05D000064 3.8e-07 58.5 160 27.5
FvH4_2g31690 Fragaria vesca HOM05D000123 ORTHO05D000064 4.9e-07 58.2 154 30.5
Lsat_1_v5_gn_5_48320 Lactuca sativa HOM05D000123 ORTHO05D000064 4.9e-07 58.2 123 34.1
AUR62039129 Chenopodium quinoa HOM05D000123 ORTHO05D000064 6.4e-07 57.8 154 32.5
Rhsim11G0043100 Rhododendron simsii HOM05D000123 ORTHO05D000064 1.1e-06 57.0 147 32.7
Medtr3g104550 Medicago truncatula HOM05D000123 ORTHO05D000064 1.9e-06 56.2 160 30.0
TAR383G0684 Trochodendron aralioides HOM05D000123 ORTHO05D000064 1.9e-06 56.2 162 28.4
GSVIVG01035385001 Vitis vinifera HOM05D000123 ORTHO05D000064 1.9e-06 56.2 116 34.5
FAN15G2073 Fragaria x ananassa HOM05D000123 ORTHO05D000064 2.4e-06 55.8 154 29.9
Ciclev10008617m.g Citrus clementina HOM05D000123 ORTHO05D000064 3.2e-06 55.5 164 27.4
vmacro00130 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 3.2e-06 55.5 153 28.8
arahy.Tifrunner.gnm1.ann1.ABBA5Z Arachis hypogaea HOM05D000123 ORTHO05D000064 4.2e-06 55.1 146 30.1
ECA240G4351 Erigeron canadensis HOM05D000123 ORTHO05D000064 4.2e-06 55.1 139 33.8
FAN27G2195 Fragaria x ananassa HOM05D000123 ORTHO05D000064 5.5e-06 54.7 154 29.2
TPR.G3565 Trifolium pratense HOM05D000123 ORTHO05D000064 5.5e-06 54.7 161 29.8
Oeu036327.2 Olea europaea HOM05D000123 ORTHO05D000064 7.1e-06 54.3 63 46.0
RcHm_v2.0_Chr6g0311151 Rosa chinensis HOM05D000123 ORTHO05D000064 7.1e-06 54.3 157 27.4
Eucgr.C00664 Eucalyptus grandis HOM05D000123 ORTHO05D000064 9.3e-06 53.9 162 29.0
Lj1g0019749 Lotus japonicus HOM05D000123 ORTHO05D000064 9.3e-06 53.9 162 25.3


User provided reference genes

Program Settings