Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C459T6 Lonicera japonica HOM05D013739 ORTHO05D013231 3.6e-36 154.8 107 100.0
Lj2C317T13 Lonicera japonica HOM05D013739 ORTHO05D013231 1.4e-32 142.9 66 100.0
Lj5C81G33 Lonicera japonica HOM05D013739 ORTHO05D013231 1.3e-30 136.3 66 95.5
Lj8A259T66 Lonicera japonica HOM05D013739 ORTHO05D013231 1.3e-30 136.3 66 97.0
QL02p073961 Quercus lobata HOM05D000023 ORTHO05D000014 4.9e-17 91.3 62 72.6
QL03p002046 Quercus lobata HOM05D000023 ORTHO05D000014 4.9e-17 91.3 62 72.6
QL03p002053 Quercus lobata HOM05D000023 ORTHO05D000014 4.9e-17 91.3 62 72.6
QL02p021831 Quercus lobata HOM05D013739 ORTHO05D013231 6.4e-17 90.9 62 72.6
CSS0002592 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.4e-16 89.0 66 69.7
CSS0032915 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.4e-16 89.0 66 69.7
CSS0046454 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.4e-16 89.0 66 69.7
QL05p032238 Quercus lobata HOM05D013739 ORTHO05D013231 3.2e-16 88.6 62 71.0
ECA233G2344 Erigeron canadensis HOM05D000023 ORTHO05D000014 5.5e-16 87.8 58 75.9
CSS0001857 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.1e-15 85.9 67 64.2
CSS0002067 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.1e-15 85.9 67 64.2
Rhsim01G0133300 Rhododendron simsii HOM05D013739 ORTHO05D013231 2.1e-15 85.9 71 63.4
Rhsim04G0045100 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.0e-15 84.3 60 70.0
Rhsim12G0154800 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.9e-13 79.3 70 58.6
PSO541G5902 Papaver somniferum HOM05D000023 ORTHO05D000014 2.5e-13 79.0 68 57.4
Rhsim08G0130700 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.6e-13 77.8 70 58.6
Rhsim13G0053900 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.6e-12 76.3 65 61.5
vmacro07091 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 2.1e-12 75.9 50 76.0
Rhsim04G0154000 Rhododendron simsii HOM05D013739 ORTHO05D013231 3.1e-11 72.0 70 54.3
ECA234G2706 Erigeron canadensis HOM05D000023 ORTHO05D000014 9.0e-11 70.5 58 62.1
vmacro08792 Vaccinium macrocarpon HOM05D013739 ORTHO05D013231 1.0e-09 67.0 39 71.8
vmacro08793 Vaccinium macrocarpon HOM05D013739 ORTHO05D013231 1.0e-09 67.0 39 71.8
vmacro07103 Vaccinium macrocarpon HOM05D013739 ORTHO05D013231 1.3e-09 66.6 41 73.2
Rhsim01G0133500 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.7e-09 66.2 70 51.4
Lj6g0020030 Lotus japonicus HOM05D000023 ORTHO05D000014 4.6e-07 58.2 45 68.9
Thecc.01G248000 Theobroma cacao HOM05D000023 ORTHO05D000014 1.3e-06 56.6 65 49.2
Lj7A259G18 Lonicera japonica HOM05D001920 ORTHO05D004895 6.7e-06 54.3 25 100.0


User provided reference genes

Program Settings