Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C419G3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-43 178.3 85 100.0
Lj8C619G11 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-40 166.8 81 96.3
Lj8C399G6 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-39 163.3 80 96.2
Lj1C99T4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-38 160.6 79 96.2
Lj2C590G2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-37 158.3 78 94.9
Lj5C479G2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-35 152.5 79 92.4
Lju4093C0T8 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-34 147.5 70 98.6
Lj9C3T3 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-33 143.7 81 85.2
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-25 119.0 57 91.2
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-15 84.0 59 66.1
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 8.2e-15 83.6 59 64.4
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-14 82.4 59 64.4
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-14 80.9 59 64.4
Lj4A278T50 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-14 80.9 59 64.4
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-13 78.6 59 62.7
Lj9A412T42 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-13 78.2 86 50.0
Lj2C1012T4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-13 77.8 86 51.2
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.7e-13 77.0 67 58.2
Lj3A910T43 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-12 75.9 84 48.8
Lj1A171T31 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-12 75.1 69 56.5
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-12 74.7 61 50.8
Lj4P388T15 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-12 74.3 69 56.5
Lj1C694T2 Lonicera japonica HOM05D000176 ORTHO05D000106 6.5e-12 73.9 73 50.7
Lj4C456T1 Lonicera japonica HOM05D000176 ORTHO05D000106 8.5e-12 73.6 59 61.0
Lj4C241T6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-11 72.4 67 56.7
Lj5A149T46 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-11 72.4 67 55.2
Lju2000C0T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-11 72.4 67 55.2
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-11 71.6 59 59.3
Lj1A1194T87 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-11 70.9 59 59.3
Lj6C257G2 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-11 70.9 59 57.6
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-10 69.7 77 46.8
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-10 69.3 88 48.9
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-10 69.3 56 53.6
Lj7C228G7 Lonicera japonica HOM05D039160 ORTHO05D000106 4.6e-10 67.8 52 61.5
Lj1C830T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-09 65.9 59 55.9
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-09 65.9 58 55.2
Hma1.2p1_0353F.1_g133150 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.9e-09 64.7 57 50.9
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.9e-09 64.7 63 49.2
Lj1P174T10 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-09 64.3 69 52.2
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-09 64.3 39 66.7
Lj2C503T4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-09 63.9 64 46.9
CSS0001494 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.5e-08 62.8 43 58.1
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.5e-08 62.8 57 49.1
Lj2C996G9 Lonicera japonica HOM05D039160 ORTHO05D000106 1.5e-08 62.8 49 61.2
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-08 62.4 49 55.1
Lj2A845T15 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-08 62.0 55 54.5
Lj6C556T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-08 62.0 74 44.6
Lj6A725T107 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-07 59.7 56 50.0
CSS0019622 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.7e-07 59.3 43 55.8
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-07 59.3 59 47.5
Lju41C56T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-07 59.3 59 47.5
CSS0043138 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.2e-07 58.9 42 57.1
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.8e-07 57.8 56 48.2
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.8e-07 57.8 56 50.0
CSS0042022 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.3e-07 57.4 43 51.2
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-07 57.4 59 45.8
Lj7A368T39 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-06 56.2 59 45.8
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 2.4e-06 55.5 46 56.5
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 4.1e-06 54.7 46 56.5
CSS0031463 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-06 53.9 44 50.0
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 9.1e-06 53.5 64 42.2
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 9.1e-06 53.5 58 50.0
Lj9A187T9 Lonicera japonica HOM05D000176 ORTHO05D000106 9.1e-06 53.5 68 45.6


User provided reference genes

Program Settings