Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C412T6 Lonicera japonica HOM05D000004 ORTHO05D000002 1.8e-50 202.2 97 100.0
Lj2C174T26 Lonicera japonica HOM05D000004 ORTHO05D000002 8.1e-35 150.2 86 80.2
Lj7C565T3 Lonicera japonica HOM05D000004 ORTHO05D000002 3.1e-34 148.3 86 79.1
Lj4P831T53 Lonicera japonica HOM05D013013 ORTHO05D000002 4.8e-27 124.4 88 64.8
Lj2P695T11 Lonicera japonica HOM05D000004 ORTHO05D000002 2.9e-24 115.2 86 58.1
Lj9C387T1 Lonicera japonica HOM05D000004 ORTHO05D000002 1.1e-23 113.2 86 57.0
Lj2C32T8 Lonicera japonica HOM05D000004 ORTHO05D000002 1.4e-23 112.8 86 57.0
Lj8C417T6 Lonicera japonica HOM05D013013 ORTHO05D000002 9.3e-23 110.2 97 64.9
Lj4C52G8 Lonicera japonica HOM05D013013 ORTHO05D000002 1.6e-19 99.4 76 59.2
Lju41C59T6 Lonicera japonica HOM05D000004 ORTHO05D000002 2.4e-18 95.5 80 55.0
Lj6C451T1 Lonicera japonica HOM05D000004 ORTHO05D000002 1.4e-15 86.3 83 45.8
Lj3C585T21 Lonicera japonica HOM05D013013 ORTHO05D000002 1.9e-15 85.9 86 53.5
Lj2A890T24 Lonicera japonica HOM05D000004 ORTHO05D000002 3.2e-15 85.1 83 44.6
Lj2P476T21 Lonicera japonica HOM05D013013 ORTHO05D000002 3.2e-15 85.1 76 47.4
Lj3P133T15 Lonicera japonica HOM05D000004 ORTHO05D000002 9.3e-15 83.6 72 52.8
Dinv12812 Davidia involucrata HOM05D000004 ORTHO05D000002 2.7e-14 82.0 92 40.2
Lj7P562T16 Lonicera japonica HOM05D000004 ORTHO05D000002 1.3e-13 79.7 83 41.0
Lj4C143T12 Lonicera japonica HOM05D000004 ORTHO05D000002 5.1e-13 77.8 83 37.3
Lj8C91T3 Lonicera japonica HOM05D000004 ORTHO05D000002 1.5e-12 76.3 92 38.0
Lj5P794T25 Lonicera japonica HOM05D000004 ORTHO05D000002 7.4e-12 73.9 74 39.2
Lj5C185T14 Lonicera japonica HOM05D000004 ORTHO05D000002 9.7e-12 73.6 82 37.8
Hma1.2p1_0540F.1_g174670 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.6e-11 72.8 90 36.7
Lj7P201T6 Lonicera japonica HOM05D000004 ORTHO05D000002 1.6e-11 72.8 82 40.2
Lj6C267T0 Lonicera japonica HOM05D000004 ORTHO05D000002 8.2e-11 70.5 82 37.8
Lj5C8G3 Lonicera japonica HOM05D000004 ORTHO05D000002 1.8e-10 69.3 45 73.3
Lj5C834G3 Lonicera japonica HOM05D000004 ORTHO05D000002 9.0e-10 67.0 82 34.1
Lj5P835T19 Lonicera japonica HOM05D000004 ORTHO05D000002 4.5e-09 64.7 82 31.7
Hma1.2p1_1778F.1_g302030 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.0e-08 63.5 92 32.6
Lj6C594G31 Lonicera japonica HOM05D000004 ORTHO05D000002 1.0e-08 63.5 70 38.6
Lj2C123T7 Lonicera japonica HOM05D013013 ORTHO05D000002 2.2e-08 62.4 80 45.0
Dinv29024 Davidia involucrata HOM05D000004 ORTHO05D000002 5.0e-08 61.2 79 36.7
PSO478G1420 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-08 61.2 95 31.6
Sabra06G0095200 Salix brachista HOM05D002585 ORTHO05D002917 6.5e-08 60.8 83 36.1
BolC4t24363H Brassica oleracea HOM05D000050 ORTHO05D000771 1.1e-07 60.1 87 33.3
Psat0s1551g0120 Pisum sativum HOM05D000004 ORTHO05D000002 2.5e-07 58.9 83 32.5
Psat3g197960 Pisum sativum HOM05D000004 ORTHO05D000002 2.5e-07 58.9 83 32.5
Hma1.2p1_0445F.1_g154130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.2e-07 58.5 92 29.3
SHI24712 Sapria himalayana HOM05D000004 ORTHO05D000002 4.2e-07 58.2 87 36.8
PSO210G0982 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-07 57.8 86 36.0
PSO017G2019 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-07 57.4 82 37.8
Psat4g198400 Pisum sativum HOM05D000004 ORTHO05D000002 9.3e-07 57.0 83 31.3
Sabra10G0044500 Salix brachista HOM05D000075 ORTHO05D000002 9.3e-07 57.0 83 34.9
PSO339G1491 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-06 56.6 93 32.3
Thhalv10012141m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 1.6e-06 56.2 87 31.0
Sabra19G0002000 Salix brachista HOM05D000004 ORTHO05D000002 1.6e-06 56.2 83 33.7
Lj4C52T7 Lonicera japonica HOM05D000004 ORTHO05D000002 2.1e-06 55.8 64 31.2
SHI48351 Sapria himalayana HOM05D000004 ORTHO05D000002 2.1e-06 55.8 87 35.6
Lj8C113G10 Lonicera japonica HOM05D000004 ORTHO05D000002 2.7e-06 55.5 69 33.3
PSO455G0193 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-06 55.5 92 29.3
Hma1.2p1_1820F.1_g304130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.6e-06 55.1 84 34.5
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 4.6e-06 54.7 83 32.5
PSO170G4312 Papaver somniferum HOM05D000004 ORTHO05D000002 6.1e-06 54.3 92 30.4
Manes.11G082735 Manihot esculenta HOM05D000004 ORTHO05D000002 7.9e-06 53.9 83 28.9
PSO339G0831 Papaver somniferum HOM05D000004 ORTHO05D000002 7.9e-06 53.9 86 33.7
PSO782G4522 Papaver somniferum HOM05D000004 ORTHO05D000002 7.9e-06 53.9 85 29.4


User provided reference genes

Program Settings