Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C372G5 Lonicera japonica HOM05D007551 ORTHO05D009424 4.3e-60 236.9 116 100.0
Dinv37453 Davidia involucrata HOM05D007551 ORTHO05D009424 1.5e-41 175.3 114 68.4
CSS0008559 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 3.4e-41 174.1 116 69.0
CSS0048505 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 4.4e-41 173.7 114 70.2
CiPaw.12G053700 Carya illinoinensis HOM05D007551 ORTHO05D009424 7.1e-39 166.4 116 69.8
Hma1.2p1_0294F.1_g116420 Hydrangea macrophylla HOM05D007551 ORTHO05D009424 4.6e-38 163.7 113 62.8
CAN.G652.9 Capsicum annuum HOM05D007551 ORTHO05D009424 7.8e-38 162.9 114 65.8
Rhsim04G0146500 Rhododendron simsii HOM05D007551 ORTHO05D009424 1.0e-37 162.5 113 66.4
Cfa012637 Carpinus fangiana HOM05D007551 ORTHO05D009424 1.3e-37 162.2 116 64.7
Peaxi162Scf00619g00022 Petunia axillaris HOM05D007551 ORTHO05D009424 3.3e-36 157.5 116 62.1
Solyc11g005940.3 Solanum lycopersicum HOM05D007551 ORTHO05D009424 4.3e-36 157.1 114 62.3
Haze_08024 Corylus avellana HOM05D007551 ORTHO05D009424 5.6e-36 156.8 116 62.1
Sopen11g001880 Solanum pennellii HOM05D007551 ORTHO05D009424 5.6e-36 156.8 114 62.3
Nitab4.5_0000856g0020 Nicotiana tabacum HOM05D007551 ORTHO05D009424 7.3e-36 156.4 114 63.2
Nitab4.5_0002667g0100 Nicotiana tabacum HOM05D007551 ORTHO05D009424 2.1e-35 154.8 114 62.3
PGSC0003DMG402028683 Solanum tuberosum HOM05D007551 ORTHO05D009424 4.7e-35 153.7 114 61.4
Prupe.3G018200 Prunus persica HOM05D007551 ORTHO05D009424 4.0e-34 150.6 111 62.2
Ciclev10000274m.g Citrus clementina HOM05D007551 ORTHO05D009424 1.2e-33 149.1 113 61.9
FvH4_5g24430 Fragaria vesca HOM05D007551 ORTHO05D009424 2.6e-33 147.9 114 57.9
FAN13G0867 Fragaria x ananassa HOM05D007551 ORTHO05D009424 2.6e-33 147.9 114 57.9
Oeu040609.1 Olea europaea HOM05D007551 ORTHO05D009424 2.6e-33 147.9 115 60.9
EL10Ac5g11872 Beta vulgaris HOM05D007551 ORTHO05D009424 4.4e-33 147.1 112 58.9
GSVIVG01036918001 Vitis vinifera HOM05D007551 ORTHO05D009424 7.6e-33 146.4 113 60.2
Cpa.g.sc3.432 Carica papaya HOM05D007551 ORTHO05D009424 9.9e-33 146.0 114 60.5
FAN04G0939 Fragaria x ananassa HOM05D007551 ORTHO05D009424 1.3e-32 145.6 114 57.0
Oeu029773.2 Olea europaea HOM05D007551 ORTHO05D009424 1.7e-32 145.2 115 61.7
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 2.2e-32 144.8 117 60.7
AUR62044750 Chenopodium quinoa HOM05D007551 ORTHO05D009424 4.9e-32 143.7 113 55.8
QL11p054679 Quercus lobata HOM05D007551 ORTHO05D009424 1.1e-31 142.5 103 66.0
Atru.chr6.2125 Acer truncatum HOM05D007551 ORTHO05D009424 2.4e-31 141.4 113 58.4
TWI60G1073 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 5.4e-31 140.2 105 62.9
Sc07g0008330 Simmondsia chinensis HOM05D007551 ORTHO05D009424 1.2e-30 139.0 113 54.0
MD06G1022200 Malus domestica HOM05D007551 ORTHO05D009424 2.1e-30 138.3 110 56.4
RcHm_v2.0_Chr7g0214821 Rosa chinensis HOM05D007551 ORTHO05D009424 3.5e-30 137.5 114 51.8
VMungo0251G2062 Vigna mungo HOM05D007551 ORTHO05D009424 6.0e-30 136.7 106 57.5
Migut.E01387 Erythranthe guttata HOM05D007551 ORTHO05D009424 1.3e-29 135.6 114 58.8
TWI34G0706 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 1.3e-29 135.6 108 62.0
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 1.7e-29 135.2 115 56.5
Ah.12g056170 Amaranthus hybridus HOM05D000351 ORTHO05D009424 2.3e-29 134.8 103 59.2
ECA240G1023 Erigeron canadensis HOM05D000046 ORTHO05D000457 3.0e-29 134.4 119 52.1
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 6.6e-29 133.3 114 57.0
MSTRG.1750 Avicennia marina HOM05D007551 ORTHO05D009424 8.7e-29 132.9 103 58.3
ClCG07G011220 Citrullus lanatus HOM05D007551 ORTHO05D009424 1.5e-28 132.1 101 56.4
Lalb_Chr09g0334421 Lupinus albus HOM05D007551 ORTHO05D009424 1.5e-28 132.1 98 58.2
Sed0007434 Sechium edule HOM05D007551 ORTHO05D009424 1.5e-28 132.1 102 54.9
Eucgr.E01036 Eucalyptus grandis HOM05D007551 ORTHO05D009424 2.5e-28 131.3 113 55.8
Nn6g33703 Nelumbo nucifera HOM05D007551 ORTHO05D009424 2.5e-28 131.3 109 57.8
Nn1g00676 Nelumbo nucifera HOM05D007551 ORTHO05D009424 3.3e-28 131.0 106 56.6
PGR042G1889 Punica granatum HOM05D007551 ORTHO05D009424 4.3e-28 130.6 113 54.9
RcHm_v2.0_Chr4g0405931 Rosa chinensis HOM05D007551 ORTHO05D009424 5.6e-28 130.2 102 55.9
Cc00_g20060 Coffea canephora HOM05D007551 ORTHO05D009424 7.3e-28 129.8 117 57.3
MELO3C016242.2 Cucumis melo HOM05D007551 ORTHO05D009424 9.6e-28 129.4 101 57.4
FvH4_4g10410 Fragaria vesca HOM05D007551 ORTHO05D009424 9.6e-28 129.4 114 50.9
FvH4_4g10440 Fragaria vesca HOM05D007551 ORTHO05D009424 9.6e-28 129.4 114 50.9
CsaV3_4G007030 Cucumis sativus L. HOM05D007551 ORTHO05D009424 1.6e-27 128.6 101 55.4
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 1.6e-27 128.6 114 54.4
Gorai.N026600 Gossypium raimondii HOM05D007551 ORTHO05D009424 3.6e-27 127.5 114 54.4
TAR362G0203 Trochodendron aralioides HOM05D007551 ORTHO05D009424 4.8e-27 127.1 115 54.8
Lalb_Chr05g0229381 Lupinus albus HOM05D007551 ORTHO05D009424 6.2e-27 126.7 115 54.8
Gohir.A12G200366 Gossypium hirsutum HOM05D007551 ORTHO05D009424 8.1e-27 126.3 114 53.5
SalBow1G3247 Salvia bowleyana HOM05D007551 ORTHO05D009424 2.4e-26 124.8 115 54.8
SalBow8G4006 Salvia bowleyana HOM05D007551 ORTHO05D009424 2.4e-26 124.8 115 54.8
Glyma.16G058700 Glycine max HOM05D007551 ORTHO05D009424 3.1e-26 124.4 111 52.3
Phvul.003G277400 Phaseolus vulgaris HOM05D007551 ORTHO05D009424 3.1e-26 124.4 105 51.4
Lsat_1_v5_gn_6_75081 Lactuca sativa HOM05D007551 ORTHO05D009424 5.3e-26 123.6 116 50.9
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 6.9e-26 123.2 114 52.6
PSO210G5788 Papaver somniferum HOM05D007551 ORTHO05D009424 9.0e-26 122.9 113 50.4
Sed0011000 Sechium edule HOM05D007551 ORTHO05D009424 1.2e-25 122.5 101 50.5
Lj4g0019089 Lotus japonicus HOM05D007551 ORTHO05D009424 1.5e-25 122.1 97 57.7
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 2.6e-25 121.3 113 46.9
SGA_v2.0_scaffold121G33050 Striga asiatica HOM05D007551 ORTHO05D009424 2.6e-25 121.3 102 55.9
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 3.4e-25 120.9 97 55.7
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 9.9e-25 119.4 97 54.6
PSO210G4217 Papaver somniferum HOM05D007551 ORTHO05D009424 2.2e-24 118.2 106 50.9
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 2.9e-24 117.9 101 54.5
Sp7g18060 Schrenkiella parvula HOM05D007551 ORTHO05D009424 3.8e-24 117.5 106 49.1
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 8.4e-24 116.3 97 53.6
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 1.9e-23 115.2 100 52.0
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 1.9e-23 115.2 100 52.0
Aa31LG6G2050 Aethionema arabicum HOM05D007551 ORTHO05D009424 3.2e-23 114.4 107 49.5
BcaB03g11619 Brassica carinata HOM05D007551 ORTHO05D009424 7.9e-22 109.8 96 53.1
MD16G1287400 Malus domestica HOM05D007551 ORTHO05D009424 1.3e-19 102.4 68 67.6
RcHm_v2.0_Chr7g0219861 Rosa chinensis HOM05D007551 ORTHO05D009424 5.3e-18 97.1 129 40.3
Potri.003G105700 Populus trichocarpa HOM05D007551 ORTHO05D009424 1.3e-16 92.4 79 58.2
Medtr8g071970 Medicago truncatula HOM05D007551 ORTHO05D009424 1.7e-16 92.0 79 54.4
Manes.17G006200 Manihot esculenta HOM05D007551 ORTHO05D009424 1.4e-15 89.0 72 59.7
Sabra03G0072700 Salix brachista HOM05D007551 ORTHO05D009424 5.5e-15 87.0 76 57.9
SalBow8G0178 Salvia bowleyana HOM05D007551 ORTHO05D009424 1.2e-14 85.9 72 58.3
TPR.G16813 Trifolium pratense HOM05D007551 ORTHO05D009424 5.1e-13 80.5 72 48.6
FAN17G3133 Fragaria x ananassa HOM05D007551 ORTHO05D009424 6.7e-13 80.1 114 36.0
Psat4g109680 Pisum sativum HOM05D007551 ORTHO05D009424 1.4e-10 72.4 71 49.3
Ca_22472_v3 Cicer arietinum L. HOM05D007551 ORTHO05D009424 9.0e-10 69.7 70 48.6
Aqoxy2G03897 Aquilegia oxysepala HOM05D007551 ORTHO05D009424 1.2e-09 69.3 64 45.3
HPP92_013845 Vanilla planifolia HOM05D007551 ORTHO05D009424 3.4e-09 67.8 96 34.4
HPP92_013860 Vanilla planifolia HOM05D007551 ORTHO05D009424 3.4e-09 67.8 96 34.4
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 4.5e-09 67.4 69 47.8
vmacro04677 Vaccinium macrocarpon HOM05D004824 ORTHO05D003903 2.5e-07 61.6 100 34.0
Aqoxy1G00124 Aquilegia oxysepala HOM05D004824 ORTHO05D003903 7.1e-07 60.1 109 28.4
GSVIVG01030107001 Vitis vinifera HOM05D005764 ORTHO05D006600 4.6e-06 57.4 100 38.0
MSTRG.1303 Avicennia marina HOM05D007639 ORTHO05D009509 6.0e-06 57.0 70 42.9
PSO017G0179 Papaver somniferum HOM05D005764 ORTHO05D006600 7.9e-06 56.6 98 28.6


User provided reference genes

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