Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C336T5 Lonicera japonica HOM05D034148 ORTHO05D000167 3.8e-60 234.6 114 100.0
Lj4C842T3 Lonicera japonica HOM05D000003 ORTHO05D000167 4.9e-31 137.9 111 60.4
Lj4C411T5 Lonicera japonica HOM05D000003 ORTHO05D000167 4.4e-24 114.8 78 69.2
Lj5P248T56 Lonicera japonica HOM05D000003 ORTHO05D000167 4.2e-22 108.2 89 51.7
Lj9C481T2 Lonicera japonica HOM05D000003 ORTHO05D000004 2.1e-21 105.9 75 64.0
Lj4C877T10 Lonicera japonica HOM05D000003 ORTHO05D000167 2.1e-13 79.3 96 36.5
Lj8C245T10 Lonicera japonica HOM05D000003 ORTHO05D000167 6.0e-13 77.8 49 71.4
Lj9P2T15 Lonicera japonica HOM05D000003 ORTHO05D000167 2.3e-12 75.9 96 35.4
Lj1P809T7 Lonicera japonica HOM05D000003 ORTHO05D000167 3.0e-12 75.5 90 38.9
Manes.17G011401 Manihot esculenta HOM05D000003 ORTHO05D000167 6.7e-12 74.3 107 34.6
CANSAT35G0754 Cannabis sativa HOM05D000003 ORTHO05D000167 5.6e-11 71.2 104 37.5
CANSAT64G1867 Cannabis sativa HOM05D000003 ORTHO05D000167 5.6e-11 71.2 106 32.1
CANSAT64G2339 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-10 69.3 107 37.4
CANSAT54G1690 Cannabis sativa HOM05D000003 ORTHO05D000004 3.6e-10 68.6 94 40.4
Lj6A31G15 Lonicera japonica HOM05D000071 ORTHO05D000029 6.2e-10 67.8 97 33.0
Lj5P393T10 Lonicera japonica HOM05D034148 ORTHO05D000167 1.4e-09 66.6 62 45.2
CANSAT56G4436 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-09 65.9 116 31.0
Manes.12G143650 Manihot esculenta HOM05D000003 ORTHO05D000167 2.4e-09 65.9 95 34.7
CANSAT54G0904 Cannabis sativa HOM05D000003 ORTHO05D000167 5.3e-09 64.7 95 32.6
CANSAT56G2961 Cannabis sativa HOM05D000003 ORTHO05D000167 5.3e-09 64.7 94 34.0
CANSAT64G0538 Cannabis sativa HOM05D000003 ORTHO05D000167 5.3e-09 64.7 95 31.6
CANSAT64G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-09 64.7 90 34.4
CANSAT01G1815 Cannabis sativa HOM05D000003 ORTHO05D000167 6.9e-09 64.3 95 32.6
CANSAT56G1507 Cannabis sativa HOM05D000003 ORTHO05D000167 9.0e-09 63.9 101 32.7
CANSAT78G0561 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-08 63.5 94 40.4
CANSAT21G2373 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-08 63.2 110 31.8
CANSAT56G2867 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-08 63.2 109 33.0
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 2.0e-08 62.8 99 30.3
CANSAT01G1104 Cannabis sativa HOM05D000003 ORTHO05D000167 2.6e-08 62.4 89 31.5
CANSAT01G2797 Cannabis sativa HOM05D000003 ORTHO05D000167 2.6e-08 62.4 98 28.6
CANSAT21G1723 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-08 62.4 89 34.8
CANSAT25G0508 Cannabis sativa HOM05D000003 ORTHO05D000167 3.4e-08 62.0 89 32.6
CANSAT01G3218 Cannabis sativa HOM05D000003 ORTHO05D000004 5.8e-08 61.2 95 37.9
CANSAT78G1445 Cannabis sativa HOM05D000003 ORTHO05D000167 5.8e-08 61.2 110 33.6
CANSAT54G1259 Cannabis sativa HOM05D000003 ORTHO05D000004 7.6e-08 60.8 107 33.6
CANSAT11G2606 Cannabis sativa HOM05D000003 ORTHO05D000167 9.9e-08 60.5 105 30.5
Lj5P173T26 Lonicera japonica HOM05D034148 ORTHO05D000167 9.9e-08 60.5 68 41.2
CANSAT01G0864 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-07 60.1 95 31.6
CANSAT64G1939 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-07 59.7 107 33.6
Lj1A1011T54 Lonicera japonica HOM05D000003 ORTHO05D000167 1.7e-07 59.7 70 38.6
CANSAT35G0331 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-07 59.3 107 30.8
CANSAT64G2698 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-07 59.3 108 32.4
Manes.07G069794 Manihot esculenta HOM05D000003 ORTHO05D000167 2.2e-07 59.3 102 34.3
Nn1g09365 Nelumbo nucifera HOM05D000003 ORTHO05D000004 2.9e-07 58.9 104 26.0
CANSAT11G0460 Cannabis sativa HOM05D000003 ORTHO05D000167 3.8e-07 58.5 90 31.1
CANSAT11G1768 Cannabis sativa HOM05D000003 ORTHO05D000167 3.8e-07 58.5 98 33.7
CANSAT56G2299 Cannabis sativa HOM05D000003 ORTHO05D000004 3.8e-07 58.5 89 30.3
CANSAT11G0573 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-07 58.2 96 31.2
CANSAT78G2124 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-07 58.2 100 34.0
CANSAT01G1093 Cannabis sativa HOM05D000003 ORTHO05D000167 6.4e-07 57.8 94 33.0
CANSAT56G0533 Cannabis sativa HOM05D000003 ORTHO05D000004 6.4e-07 57.8 94 34.0
CANSAT25G1969 Cannabis sativa HOM05D000003 ORTHO05D000004 8.4e-07 57.4 100 34.0
CANSAT54G2591 Cannabis sativa HOM05D000003 ORTHO05D000167 8.4e-07 57.4 94 28.7
CANSAT11G1919 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 57.0 95 31.6
CANSAT56G2110 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 57.0 89 31.5
CANSAT64G1116 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.0 99 33.3
CANSAT80G2317 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 57.0 99 30.3
Manes.06G029901 Manihot esculenta HOM05D000003 ORTHO05D000167 1.1e-06 57.0 97 30.9
Manes.10G073737 Manihot esculenta HOM05D000003 ORTHO05D000004 1.1e-06 57.0 99 32.3
CANSAT64G2778 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-06 56.6 94 31.9
CANSAT78G0193 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-06 56.6 108 32.4
Medtr0130s0050 Medicago truncatula HOM05D030283 ORTHO05D025843 1.4e-06 56.6 93 29.0
CANSAT25G0043 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-06 56.2 97 32.0
CANSAT35G0956 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-06 56.2 108 30.6
CANSAT54G1953 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-06 56.2 89 36.0
Manes.06G094851 Manihot esculenta HOM05D000003 ORTHO05D000004 1.9e-06 56.2 102 33.3
CANSAT01G1250 Cannabis sativa HOM05D000003 ORTHO05D000167 2.4e-06 55.8 96 33.3
CANSAT54G2762 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 55.8 93 32.3
CANSAT64G0360 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 55.8 100 31.0
Manes.10G063301 Manihot esculenta HOM05D000003 ORTHO05D000167 2.4e-06 55.8 96 28.1
Medtr4g131210 Medicago truncatula HOM05D020360 ORTHO05D019224 2.4e-06 55.8 88 33.0
CANSAT25G2465 Cannabis sativa HOM05D000003 ORTHO05D000167 3.2e-06 55.5 93 34.4
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-06 55.5 93 32.3
CANSAT64G1882 Cannabis sativa HOM05D000003 ORTHO05D000167 3.2e-06 55.5 97 32.0
CANSAT25G2167 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-06 55.1 93 33.3
CANSAT25G2489 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-06 55.1 86 30.2
CANSAT56G2145 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-06 55.1 86 32.6
CANSAT56G2204 Cannabis sativa HOM05D000003 ORTHO05D000004 4.2e-06 55.1 104 28.8
CANSAT56G3606 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-06 55.1 93 32.3
CANSAT56G4021 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-06 55.1 120 27.5
CANSAT80G2199 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-06 55.1 99 28.3
Peaxi162Scf00139g10014 Petunia axillaris HOM05D000003 ORTHO05D000167 4.2e-06 55.1 93 26.9
CANSAT01G0905 Cannabis sativa HOM05D000003 ORTHO05D000167 5.5e-06 54.7 99 29.3
CANSAT80G2601 Cannabis sativa HOM05D000003 ORTHO05D000004 5.5e-06 54.7 97 33.0
Solyc03g078170.1 Solanum lycopersicum HOM05D000003 ORTHO05D000167 5.5e-06 54.7 90 31.1
CANSAT01G1615 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-06 54.3 88 30.7
CANSAT25G3689 Cannabis sativa HOM05D000003 ORTHO05D000167 7.1e-06 54.3 105 29.5
CANSAT64G2653 Cannabis sativa HOM05D000003 ORTHO05D000167 7.1e-06 54.3 120 27.5
Manes.12G101201 Manihot esculenta HOM05D000003 ORTHO05D000004 7.1e-06 54.3 99 31.3
Manes.14G123021 Manihot esculenta HOM05D000003 ORTHO05D000167 7.1e-06 54.3 95 33.7
CANSAT01G0458 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-06 53.9 99 30.3
CANSAT11G0809 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-06 53.9 99 31.3
CANSAT11G1690 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-06 53.9 104 26.9
CANSAT21G1802 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-06 53.9 95 30.5
CANSAT56G0362 Cannabis sativa HOM05D000003 ORTHO05D000004 9.3e-06 53.9 92 32.6
CANSAT56G0876 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-06 53.9 88 29.5
Nn8g41081 Nelumbo nucifera HOM05D000003 ORTHO05D000004 9.3e-06 53.9 104 25.0


User provided reference genes

Program Settings