Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 0.0e+00 1077.8 587 100.0
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 8.5e-196 687.6 595 70.4
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 1.2e-184 650.6 585 67.4
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 3.4e-176 622.5 551 67.7
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 3.2e-174 615.9 561 62.7
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 3.0e-164 582.8 568 61.6
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 5.1e-164 582.0 564 60.8
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.5e-163 580.5 553 66.0
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 9.9e-160 567.8 522 62.8
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 6.0e-157 558.5 597 60.1
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 8.6e-156 554.7 523 61.2
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 3.3e-155 552.7 553 63.8
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 3.3e-155 552.7 566 58.0
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 2.0e-152 543.5 521 61.8
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 3.4e-152 542.7 595 57.5
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 8.4e-151 538.1 566 57.1
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 3.2e-150 536.2 517 61.3
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 7.1e-150 535.0 553 63.3
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 2.7e-149 533.1 566 56.7
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 1.7e-148 530.4 524 60.9
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.1e-147 527.7 594 58.1
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 2.8e-146 523.1 585 58.5
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 4.0e-145 519.2 584 55.7
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 2.6e-144 516.5 573 55.8
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 9.9e-144 514.6 524 60.1
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 3.8e-143 512.7 524 59.7
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 8.4e-143 511.5 519 58.4
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 6.0e-141 505.4 527 57.7
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 1.6e-138 497.3 554 58.7
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 6.2e-138 495.4 554 58.7
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 1.4e-137 494.2 521 56.6
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 5.3e-137 492.3 679 51.7
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 1.5e-136 490.7 519 57.4
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 3.4e-136 489.6 559 58.9
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 7.6e-136 488.4 566 54.4
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 3.8e-135 486.1 574 53.0
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.1e-134 484.6 584 53.6
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.1e-134 484.6 584 53.6
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 2.4e-134 483.4 556 59.2
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 4.2e-134 482.6 585 53.7
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 4.6e-133 479.2 527 56.5
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 6.0e-133 478.8 520 55.6
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 3.0e-132 476.5 533 56.3
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.1e-131 474.6 522 56.3
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 6.2e-130 468.8 522 55.9
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 4.5e-128 462.6 572 53.1
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 5.8e-128 462.2 525 57.3
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 2.9e-127 459.9 446 65.9
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 1.1e-126 458.0 522 54.6
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 3.0e-124 449.9 494 56.1
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 1.5e-123 447.6 523 54.5
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 1.3e-119 434.5 450 62.7
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 8.4e-119 431.8 553 53.7
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 2.5e-118 430.3 421 59.9
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 9.3e-118 428.3 513 52.4
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 1.6e-117 427.6 559 53.8
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 1.6e-117 427.6 559 53.8
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 2.3e-116 423.7 525 53.0
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 5.1e-116 422.5 420 61.2
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 8.7e-116 421.8 557 54.0
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 1.5e-115 421.0 531 52.5
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 9.7e-115 418.3 524 52.1
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 1.4e-113 414.5 557 53.1
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 3.1e-113 413.3 524 51.5
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 7.2e-110 402.1 559 48.3
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 1.0e-108 398.3 525 50.7
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 2.3e-108 397.1 523 50.3
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 2.3e-108 397.1 529 55.6
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 3.3e-107 393.3 521 49.3
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 9.4e-102 375.2 355 60.8
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 2.7e-101 373.6 373 61.7
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 9.7e-99 365.2 424 54.7
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 1.4e-97 361.3 407 56.0
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 2.4e-97 360.5 521 45.7
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 7.0e-97 359.0 524 46.0
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 1.3e-95 354.8 420 54.5
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 1.0e-92 345.1 525 45.5
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 1.1e-78 298.5 422 47.4
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 8.0e-77 292.4 316 57.0
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 4.1e-73 280.0 281 59.8
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 8.6e-63 245.7 322 50.3
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 5.8e-59 233.0 312 50.3
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 3.4e-43 180.6 229 48.5
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.2e-35 155.6 109 72.5
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 3.5e-32 144.1 311 36.3
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 2.4e-25 121.3 158 50.6
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 4.2e-25 120.6 194 41.2
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 9.3e-25 119.4 109 78.9
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 8.7e-23 112.8 565 28.8
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 5.6e-22 110.2 76 77.6
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 2.1e-21 108.2 236 37.3
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 3.7e-21 107.5 71 80.3
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 1.1e-17 95.9 75 64.0
CSS0039429 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 3.2e-17 94.4 83 65.1
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 7.1e-17 93.2 67 67.2
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.2e-16 92.4 53 90.6
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 1.6e-16 92.0 747 26.1
CSS0030533 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 6.0e-16 90.1 83 62.7
CSS0027374 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 5.1e-15 87.0 83 61.4
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 3.7e-13 80.9 292 31.2
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 6.9e-12 76.6 44 88.6
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 4.5e-11 73.9 40 92.5
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 8.4e-10 69.7 67 58.2
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 4.6e-08 63.9 62 56.5
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 4.6e-08 63.9 62 56.5
FvH4_5g27461 Fragaria vesca HOM05D007238 ORTHO05D009206 5.1e-07 60.5 83 47.0
HanXRQChr07g0192461 Helianthus annuus HOM05D007238 ORTHO05D009206 1.9e-06 58.5 36 80.6
FvH4_5g27460 Fragaria vesca HOM05D007238 ORTHO05D009206 9.7e-06 56.2 46 63.0


User provided reference genes

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