Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C331T9 Lonicera japonica HOM05D004914 ORTHO05D006512 0.0e+00 1196.4 612 100.0
Dinv37416 Davidia involucrata HOM05D004914 ORTHO05D006512 1.8e-276 955.7 706 73.5
CSS0043328 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 6.5e-271 937.2 685 74.0
TAR375G1103 Trochodendron aralioides HOM05D004914 ORTHO05D006512 4.2e-270 934.5 704 71.2
CSS0049486 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 5.5e-270 934.1 698 72.9
ECA240G3397 Erigeron canadensis HOM05D004914 ORTHO05D006512 1.0e-268 929.9 699 72.1
CSS0032490 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.3e-268 929.5 698 72.6
HanXRQChr13g0411091 Helianthus annuus HOM05D004914 ORTHO05D006512 3.0e-268 928.3 699 72.1
Potri.003G104000 Populus trichocarpa HOM05D004914 ORTHO05D006512 1.9e-267 925.6 699 72.1
Aqoxy7G00885 Aquilegia oxysepala HOM05D004914 ORTHO05D006512 9.6e-267 923.3 709 69.8
Ciclev10000444m.g Citrus clementina HOM05D004914 ORTHO05D006512 2.8e-266 921.8 698 71.5
GSVIVG01022810001 Vitis vinifera HOM05D004914 ORTHO05D006512 8.2e-266 920.2 698 70.3
Oeu046797.1 Olea europaea HOM05D004914 ORTHO05D006512 1.4e-265 919.5 704 70.9
CANSAT35G0949 Cannabis sativa HOM05D004914 ORTHO05D006512 2.4e-265 918.7 696 71.1
Nn1g02045 Nelumbo nucifera HOM05D004914 ORTHO05D006512 5.3e-265 917.5 699 70.4
FvH4_5g24140 Fragaria vesca HOM05D004914 ORTHO05D006512 1.2e-264 916.4 698 71.9
RcHm_v2.0_Chr7g0213811 Rosa chinensis HOM05D004914 ORTHO05D006512 1.5e-264 916.0 698 72.2
Atru.chr6.2105 Acer truncatum HOM05D004914 ORTHO05D006512 3.4e-264 914.8 702 71.4
Cc08_g05310 Coffea canephora HOM05D004914 ORTHO05D006512 7.6e-264 913.7 696 71.3
RcHm_v2.0_Chr7g0213721 Rosa chinensis HOM05D004914 ORTHO05D006512 7.6e-264 913.7 696 71.8
Medtr5g026640 Medicago truncatula HOM05D004914 ORTHO05D006512 1.0e-263 913.3 695 70.5
CiPaw.13G121600 Carya illinoinensis HOM05D004914 ORTHO05D006512 1.3e-263 912.9 693 71.3
MD06G1017300 Malus domestica HOM05D004914 ORTHO05D006512 5.0e-263 911.0 698 70.8
Eucgr.E01217 Eucalyptus grandis HOM05D004914 ORTHO05D006512 8.4e-263 910.2 697 70.2
MSTRG.25735 Avicennia marina HOM05D004914 ORTHO05D006512 1.1e-262 909.8 696 70.7
Lsat_1_v5_gn_5_55660 Lactuca sativa HOM05D004914 ORTHO05D006512 1.1e-262 909.8 699 70.4
TPR.G17253 Trifolium pratense HOM05D004914 ORTHO05D006512 1.4e-262 909.4 696 70.4
Lj2g0015407 Lotus japonicus HOM05D004914 ORTHO05D006512 2.5e-262 908.7 696 70.8
Prupe.5G019100 Prunus persica HOM05D004914 ORTHO05D006512 2.5e-262 908.7 706 69.7
PGR042G1968 Punica granatum HOM05D004914 ORTHO05D006512 2.5e-262 908.7 699 70.0
Peaxi162Scf00053g00525 Petunia axillaris HOM05D004914 ORTHO05D006512 5.5e-262 907.5 698 70.8
Solyc08g075570.4 Solanum lycopersicum HOM05D004914 ORTHO05D006512 2.7e-261 905.2 698 70.6
Sopen08g024250 Solanum pennellii HOM05D004914 ORTHO05D006512 7.9e-261 903.7 697 70.4
CSS0023780 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.0e-260 903.3 685 72.4
Psat2g142640 Pisum sativum HOM05D004914 ORTHO05D006512 1.3e-260 902.9 696 69.4
Sabra03G0071100 Salix brachista HOM05D004914 ORTHO05D006512 1.8e-260 902.5 727 68.5
Nn3g19257 Nelumbo nucifera HOM05D004914 ORTHO05D006512 5.1e-260 901.0 697 69.7
VMungo1215G3133 Vigna mungo HOM05D004914 ORTHO05D006512 5.7e-259 897.5 708 68.9
Duzib205G0746 Durio zibethinus HOM05D004914 ORTHO05D006512 2.2e-258 895.6 695 69.6
Glyma.04G123700 Glycine max HOM05D004914 ORTHO05D006512 2.8e-258 895.2 700 69.4
Phvul.002G127200 Phaseolus vulgaris HOM05D004914 ORTHO05D006512 3.7e-258 894.8 708 68.8
Thecc.03G324700 Theobroma cacao HOM05D004914 ORTHO05D006512 3.7e-258 894.8 692 70.2
TWI12G0750 Tripterygium wilfordii HOM05D004914 ORTHO05D006512 4.8e-258 894.4 695 69.5
Manes.17G007000 Manihot esculenta HOM05D004914 ORTHO05D006512 6.3e-258 894.0 703 68.6
ATR0829G119 Amborella trichopoda HOM05D004914 ORTHO05D006512 1.1e-257 893.3 702 68.7
DCAR_006313 Daucus carota HOM05D004914 ORTHO05D006512 1.1e-257 893.3 694 70.7
RcHm_v2.0_Chr4g0401521 Rosa chinensis HOM05D004914 ORTHO05D006512 1.8e-257 892.5 698 70.2
Eucgr.E01215 Eucalyptus grandis HOM05D004914 ORTHO05D006512 8.5e-255 883.6 697 68.4
RcHm_v2.0_Chr4g0401421 Rosa chinensis HOM05D004914 ORTHO05D006512 1.9e-254 882.5 698 69.1
arahy.Tifrunner.gnm1.ann1.AE6EEZ Arachis hypogaea HOM05D004914 ORTHO05D006512 3.2e-254 881.7 691 69.5
arahy.Tifrunner.gnm1.ann1.Q0IN0Q Arachis hypogaea HOM05D004914 ORTHO05D006512 3.2e-254 881.7 691 69.5
MELO3C013790.2 Cucumis melo HOM05D004914 ORTHO05D006512 7.2e-254 880.6 697 66.6
CsaV3_3G001000 Cucumis sativus L. HOM05D004914 ORTHO05D006512 6.1e-253 877.5 697 66.4
Rhsim11G0034500 Rhododendron simsii HOM05D004914 ORTHO05D006512 1.0e-252 876.7 697 70.0
HPP92_015125 Vanilla planifolia HOM05D004914 ORTHO05D006512 1.0e-252 876.7 707 67.5
Gorai.005G228700 Gossypium raimondii HOM05D004914 ORTHO05D006512 1.8e-252 875.9 693 67.7
vmacro00075 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 3.3e-251 871.7 700 68.7
SalBow4G0569 Salvia bowleyana HOM05D004914 ORTHO05D006512 6.3e-250 867.5 695 68.3
Sed0010004 Sechium edule HOM05D004914 ORTHO05D006512 2.4e-249 865.5 697 66.0
CSS0040630 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 5.3e-249 864.4 714 67.8
Lalb_Chr05g0215361 Lupinus albus HOM05D004914 ORTHO05D006512 3.4e-248 861.7 683 68.2
ClCG10G000930 Citrullus lanatus HOM05D004914 ORTHO05D006512 1.9e-246 855.9 693 65.5
Gohir.D02G202952 Gossypium hirsutum HOM05D004914 ORTHO05D006512 3.2e-246 855.1 693 66.2
Carub.0008s0273 Capsella rubella HOM05D004914 ORTHO05D006512 6.7e-244 847.4 702 65.1
Actinidia01258 Actinidia chinensis HOM05D004914 ORTHO05D006512 1.1e-243 846.7 706 67.3
QL12p001913 Quercus lobata HOM05D004914 ORTHO05D006512 3.3e-243 845.1 690 67.0
AL8G13420 Arabidopsis lyrata HOM05D004914 ORTHO05D006512 7.4e-243 844.0 677 66.9
Aa31LG9G7630 Aethionema arabicum HOM05D004914 ORTHO05D006512 1.7e-242 842.8 700 65.4
BraA09t37776Z Brassica rapa HOM05D004914 ORTHO05D006512 1.8e-241 839.3 702 65.0
A09p21740 Brassica napus HOM05D004914 ORTHO05D006512 2.4e-241 839.0 702 64.8
FAN13G2505 Fragaria x ananassa HOM05D004914 ORTHO05D006512 2.4e-241 839.0 715 66.2
BcaB07g30888 Brassica carinata HOM05D004914 ORTHO05D006512 7.0e-241 837.4 702 65.1
CARHR176690 Cardamine hirsuta HOM05D004914 ORTHO05D006512 1.6e-240 836.3 703 64.7
BcaC04g21765 Brassica carinata HOM05D004914 ORTHO05D006512 2.6e-240 835.5 702 64.7
BolC9t55648H Brassica oleracea HOM05D004914 ORTHO05D006512 2.6e-240 835.5 702 64.7
AT5G45380 Arabidopsis thaliana HOM05D004914 ORTHO05D006512 4.5e-240 834.7 703 64.3
C09p27840 Brassica napus HOM05D004914 ORTHO05D006512 1.7e-239 832.8 702 64.5
CSS0001315 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.2e-239 832.4 675 68.9
A02p29100 Brassica napus HOM05D004914 ORTHO05D006512 5.0e-239 831.2 701 64.3
BcaB07g30458 Brassica carinata HOM05D004914 ORTHO05D006512 6.5e-239 830.9 699 63.9
Thhalv10000803m.g Eutrema salsugineum HOM05D004914 ORTHO05D006512 6.5e-239 830.9 701 63.9
BcaC03g16746 Brassica carinata HOM05D004914 ORTHO05D006512 1.1e-238 830.1 701 64.3
C02p46180 Brassica napus HOM05D004914 ORTHO05D006512 1.1e-238 830.1 701 64.3
BolC2t10674H Brassica oleracea HOM05D004914 ORTHO05D006512 1.1e-238 830.1 701 64.3
BraA02t07943Z Brassica rapa HOM05D004914 ORTHO05D006512 1.5e-238 829.7 701 64.2
Sp2g10330 Schrenkiella parvula HOM05D004914 ORTHO05D006512 1.5e-238 829.7 702 64.2
CAN.G1731.1 Capsicum annuum HOM05D004914 ORTHO05D006512 4.2e-238 828.2 695 66.0
SEGI_38788 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 5.5e-238 827.8 698 64.8
PSO717G0130 Papaver somniferum HOM05D004914 ORTHO05D006512 9.4e-238 827.0 693 66.5
CDE12G0485 Ceratophyllum demersum HOM05D004914 ORTHO05D006512 3.5e-232 808.5 693 63.1
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 1.1e-230 803.5 656 66.8
FAN04G0884 Fragaria x ananassa HOM05D004914 ORTHO05D006512 1.4e-228 796.6 685 65.8
QL12p001923 Quercus lobata HOM05D004914 ORTHO05D006512 1.2e-227 793.5 666 66.1
EL10Ac5g11909 Beta vulgaris HOM05D004914 ORTHO05D006512 6.3e-226 787.7 704 62.2
Zm00001eb279810 Zea mays HOM05D004914 ORTHO05D006512 1.1e-225 786.9 709 62.6
Eucgr.E01216 Eucalyptus grandis HOM05D004914 ORTHO05D006512 4.5e-224 781.6 616 68.8
SGA_v2.0_scaffold96G29079 Striga asiatica HOM05D004914 ORTHO05D006512 1.5e-222 776.5 700 63.4
SMO134G0146 Selaginella moellendorffii HOM05D004914 ORTHO05D006512 7.2e-222 774.2 656 65.7
Ca_25087_v3 Cicer arietinum L. HOM05D004914 ORTHO05D006512 1.2e-221 773.5 612 69.1
Os10g0580400 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D006512 2.7e-221 772.3 687 62.9
Mapoly0022s0194 Marchantia polymorpha HOM05D004914 ORTHO05D006512 1.2e-219 766.9 712 61.0
Pp3c1_21890 Physcomitrium patens HOM05D004914 ORTHO05D006512 2.0e-219 766.1 693 61.2
Migut.A00542 Erythranthe guttata HOM05D004914 ORTHO05D006512 1.1e-217 760.4 654 64.7
unitig_92.g28131 Utricularia gibba HOM05D004914 ORTHO05D006512 3.6e-213 745.3 694 60.5
AUR62027313 Chenopodium quinoa HOM05D004914 ORTHO05D006512 7.0e-209 731.1 693 59.3
Pp3c14_7160 Physcomitrium patens HOM05D004914 ORTHO05D006512 4.6e-208 728.4 644 62.1
Gohir.A03G179800 Gossypium hirsutum HOM05D004914 ORTHO05D006512 5.8e-203 711.4 583 67.2
FAN18G4324 Fragaria x ananassa HOM05D004914 ORTHO05D006512 3.7e-202 708.8 568 69.0
PGSC0003DMG401007615 Solanum tuberosum HOM05D004914 ORTHO05D006512 3.5e-192 675.6 395 90.1
Nitab4.5_0016045g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 1.7e-191 673.3 541 69.7
SEGI_09515 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 1.3e-186 657.1 409 83.4
SEGI_28013 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 8.4e-186 654.4 393 86.3
vmacro00050 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 7.6e-179 631.3 720 53.3
CDE01G0684 Ceratophyllum demersum HOM05D004914 ORTHO05D006512 6.2e-173 611.7 696 52.2
Mapoly0244s0005 Marchantia polymorpha HOM05D004914 ORTHO05D006512 9.0e-172 607.8 524 66.0
AagrBONN_evm.TU.Sc2ySwM_344.881 Anthoceros agrestis HOM05D004914 ORTHO05D006512 7.9e-168 594.7 566 59.4
AUR62007419 Chenopodium quinoa HOM05D004914 ORTHO05D006512 1.8e-164 583.6 524 61.8
CSS0048600 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 3.3e-158 562.8 392 78.1
MCO16G134 Micromonas commoda HOM05D004914 ORTHO05D006512 8.7e-151 538.1 705 45.8
CSS0015562 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.5e-150 537.3 511 61.6
Nitab4.5_0011552g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 1.3e-141 507.7 461 63.3
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 1.8e-135 487.3 610 46.2
COL.COLO4_37234 Corchorus olitorius HOM05D004914 ORTHO05D006512 3.8e-130 469.5 609 48.4
Oeu046798.1 Olea europaea HOM05D004914 ORTHO05D006512 7.0e-124 448.7 610 46.2
Cre08.g360200 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 1.9e-121 440.7 645 40.9
Cre08.g360250 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 4.4e-118 429.5 660 40.2
Cre17.g703800 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 6.1e-112 409.1 661 38.3
Mapoly0006s0303 Marchantia polymorpha HOM05D004914 ORTHO05D006512 4.4e-102 376.3 635 35.9
Mapoly0339s0001 Marchantia polymorpha HOM05D004914 ORTHO05D006512 2.0e-99 367.5 249 79.1
AagrBONN_evm.TU.Sc2ySwM_117.1801 Anthoceros agrestis HOM05D004914 ORTHO05D006512 2.9e-98 363.6 630 37.3
AagrBONN_evm.TU.Sc2ySwM_228.2050 Anthoceros agrestis HOM05D004914 ORTHO05D006512 4.4e-94 349.7 622 37.3
AagrBONN_evm.TU.Sc2ySwM_117.1769 Anthoceros agrestis HOM05D004914 ORTHO05D006512 1.3e-93 348.2 643 34.1
AagrBONN_evm.TU.Sc2ySwM_228.2053 Anthoceros agrestis HOM05D004914 ORTHO05D006512 1.7e-93 347.8 372 51.1
CSS0040069 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.6e-86 323.9 344 58.7
SEGI_16876 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 5.1e-66 256.5 221 64.7
PGSC0003DMG402007615 Solanum tuberosum HOM05D004914 ORTHO05D006512 1.8e-63 248.1 215 57.7
SEGI_18257 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 3.9e-58 230.3 225 53.3
CSS0006727 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 3.3e-57 227.3 171 74.9
FAN18G1875 Fragaria x ananassa HOM05D004914 ORTHO05D006512 4.6e-51 206.8 115 88.7
Mapoly1910s0001 Marchantia polymorpha HOM05D004914 ORTHO05D006512 6.5e-37 159.8 147 55.8
AagrBONN_evm.TU.Sc2ySwM_117.1738 Anthoceros agrestis HOM05D004914 ORTHO05D038447 1.1e-28 132.5 101 67.3
CSS0011428 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 3.9e-26 124.0 78 79.5
CBR_g12519 Chara braunii HOM05D004914 ORTHO05D006512 2.5e-25 121.3 92 64.1
arahy.Tifrunner.gnm1.ann1.N8W4DB Arachis hypogaea HOM05D004914 ORTHO05D000389 6.3e-24 116.7 62 85.5
arahy.Tifrunner.gnm1.ann1.3D8EL1 Arachis hypogaea HOM05D004914 ORTHO05D000389 1.8e-23 115.2 59 88.1
Os02g0689066 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D038447 9.7e-17 92.8 56 78.6
CSS0022246 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D112219 2.9e-13 81.3 58 69.0
CSS0001366 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D112087 3.2e-12 77.8 55 69.1
CSS0009431 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D113607 3.2e-12 77.8 55 69.1
CSS0040812 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D111646 6.1e-11 73.6 52 69.2
CSS0022754 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D109566 3.9e-10 70.9 52 67.3


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