Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 4.5e-158 561.2 287 100.0
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 2.0e-145 519.2 329 84.8
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 1.7e-109 399.8 308 68.5
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 6.2e-107 391.3 323 64.1
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 1.4e-106 390.2 303 66.7
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 3.0e-101 372.5 337 61.4
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 2.5e-100 369.4 309 62.5
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 6.2e-99 364.8 317 61.2
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 3.1e-98 362.5 323 60.4
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 1.5e-97 360.1 325 61.8
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 3.4e-97 359.0 310 61.0
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 7.6e-97 357.8 318 60.4
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 2.2e-96 356.3 293 63.1
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 2.4e-95 352.8 299 62.2
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 3.2e-95 352.4 307 60.6
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 3.2e-95 352.4 307 60.6
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 4.2e-95 352.1 324 57.4
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 9.3e-95 350.9 313 58.5
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 1.6e-94 350.1 319 56.4
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 2.7e-94 349.4 330 57.0
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 2.3e-93 346.3 336 55.4
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 3.9e-93 345.5 307 60.3
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 5.1e-93 345.1 314 59.2
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 5.1e-93 345.1 320 56.9
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 8.7e-93 344.4 329 57.1
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 8.7e-93 344.4 313 59.4
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 1.1e-92 344.0 299 60.5
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 1.1e-92 344.0 341 56.3
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 1.1e-92 344.0 319 57.1
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 3.3e-92 342.4 307 60.3
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 7.3e-92 341.3 331 55.6
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 3.6e-91 339.0 324 57.1
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 4.8e-91 338.6 310 57.7
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 6.2e-91 338.2 321 57.0
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 8.1e-91 337.8 267 64.8
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 8.1e-91 337.8 300 59.3
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 1.8e-90 336.7 303 57.4
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 2.4e-90 336.3 324 57.1
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 2.4e-90 336.3 315 56.8
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 3.1e-90 335.9 321 55.8
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 4.0e-90 335.5 320 55.0
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 5.3e-90 335.1 332 53.6
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 5.3e-90 335.1 323 57.0
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 6.9e-90 334.7 315 56.8
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 9.0e-90 334.3 398 49.2
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.5e-89 333.6 316 57.0
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 2.0e-89 333.2 330 56.4
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 2.0e-89 333.2 314 56.1
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 2.0e-89 333.2 310 57.7
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 7.6e-89 331.3 322 55.6
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 9.9e-89 330.9 313 56.9
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 9.9e-89 330.9 323 55.4
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 1.7e-88 330.1 337 54.9
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 3.8e-88 328.9 298 58.1
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 6.4e-88 328.2 338 55.3
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 8.4e-88 327.8 316 56.0
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 1.4e-87 327.0 337 55.2
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 1.9e-87 326.6 292 58.6
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 1.9e-87 326.6 291 61.9
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 1.9e-87 326.6 291 61.9
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 2.4e-87 326.2 307 58.3
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 1.2e-86 323.9 282 59.6
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 2.1e-86 323.2 292 57.9
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 6.0e-86 321.6 298 55.7
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 6.0e-86 321.6 325 54.2
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 7.9e-86 321.2 299 57.2
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 1.8e-85 320.1 301 56.5
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 1.8e-85 320.1 301 56.5
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 3.0e-85 319.3 334 53.6
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 3.9e-85 318.9 301 56.1
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 5.1e-85 318.5 304 54.3
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 8.7e-85 317.8 306 56.2
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 1.9e-84 316.6 294 56.5
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 2.5e-84 316.2 295 56.3
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 5.6e-84 315.1 309 54.4
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 5.6e-84 315.1 309 54.4
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 9.6e-84 314.3 308 53.2
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 6.2e-83 311.6 326 50.9
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 8.1e-83 311.2 301 54.8
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 1.5e-81 307.0 310 54.2
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 4.5e-81 305.4 261 64.0
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 8.4e-80 301.2 187 80.7
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 1.2e-78 297.4 323 49.8
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 1.6e-75 287.0 296 51.7
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 4.8e-75 285.4 267 57.3
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 4.8e-75 285.4 260 57.3
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 8.2e-75 284.6 336 48.5
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 8.2e-75 284.6 155 95.5
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 1.4e-74 283.9 180 76.7
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 1.4e-74 283.9 180 76.7
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 1.2e-73 280.8 269 56.1
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 1.5e-73 280.4 188 75.0
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 5.8e-73 278.5 361 45.2
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.1e-71 274.2 247 55.9
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 3.2e-71 272.7 187 70.6
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 1.2e-70 270.8 295 49.8
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 3.0e-69 266.2 311 48.2
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 1.9e-68 263.5 319 46.1
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 4.3e-68 262.3 292 50.3
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 1.6e-67 260.4 303 46.5
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 5.5e-63 245.4 331 44.1
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 4.6e-62 242.3 239 55.6
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 1.2e-57 227.6 246 49.2
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 2.9e-56 223.0 215 58.6
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 1.2e-54 217.6 163 66.9
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 2.7e-54 216.5 323 42.1
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 2.0e-49 200.3 162 61.7
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 8.5e-48 194.9 298 38.3
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 2.8e-43 179.9 141 62.4
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 2.5e-39 166.8 310 36.8
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 4.1e-34 149.4 408 28.9
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 1.4e-29 134.4 133 59.4
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 8.3e-27 125.2 150 48.7
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 2.0e-25 120.6 122 51.6
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 2.3e-24 117.1 348 28.4
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.1e-23 114.8 77 75.3
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 7.2e-23 112.1 146 43.8
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 1.4e-21 107.8 57 93.0
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 2.6e-20 103.6 79 60.8
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 8.3e-19 98.6 72 68.1
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 1.3e-16 91.3 118 44.9
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 3.1e-13 80.1 160 35.6
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 3.1e-13 80.1 52 71.2
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.2e-12 78.2 80 55.0
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 2.6e-12 77.0 48 75.0
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 3.4e-12 76.6 40 95.0
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 5.8e-12 75.9 63 61.9
Rhsim04G0176300 Rhododendron simsii HOM05D006103 ORTHO05D007468 9.2e-10 68.6 53 66.0


User provided reference genes

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