Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C255T7 Lonicera japonica HOM05D004508 ORTHO05D005180 4.7e-230 800.8 397 100.0
Dinv37763 Davidia involucrata HOM05D004508 ORTHO05D005180 7.9e-169 597.4 395 74.7
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 3.8e-163 578.6 383 74.4
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 4.9e-163 578.2 394 72.1
CSS0042805 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 7.1e-162 574.3 395 72.2
Rhsim07G0101600 Rhododendron simsii HOM05D004508 ORTHO05D005180 6.7e-160 567.8 381 70.6
Actinidia27434 Actinidia chinensis HOM05D004508 ORTHO05D005180 2.5e-159 565.8 388 70.4
CSS0027133 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 4.8e-158 561.6 372 74.5
vmacro14042 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 1.4e-157 560.1 394 70.1
TAR374G1167 Trochodendron aralioides HOM05D004508 ORTHO05D005180 6.9e-157 557.8 373 73.5
CiPaw.11G147500 Carya illinoinensis HOM05D004508 ORTHO05D005180 2.6e-156 555.8 381 71.9
ClCG10G003140 Citrullus lanatus HOM05D004508 ORTHO05D005180 7.1e-154 547.7 382 71.2
MSTRG.12061 Avicennia marina HOM05D004508 ORTHO05D005180 9.3e-154 547.4 386 69.4
Cpa.g.sc29.91 Carica papaya HOM05D004508 ORTHO05D005180 9.3e-154 547.4 381 70.6
RcHm_v2.0_Chr4g0419741 Rosa chinensis HOM05D004508 ORTHO05D005180 2.7e-153 545.8 387 69.0
RcHm_v2.0_Chr7g0201591 Rosa chinensis HOM05D004508 ORTHO05D005180 4.6e-153 545.0 387 69.3
QL12p014971 Quercus lobata HOM05D004508 ORTHO05D005180 7.9e-153 544.3 387 69.5
Prupe.5G079500 Prunus persica HOM05D004508 ORTHO05D005180 1.8e-152 543.1 381 70.3
Hund14651 Selenicereus undatus HOM05D004508 ORTHO05D005180 3.9e-152 542.0 380 69.7
Atru.chr9.1431 Acer truncatum HOM05D004508 ORTHO05D005180 1.9e-151 539.7 384 70.3
Sc07g0009440 Simmondsia chinensis HOM05D004508 ORTHO05D005180 2.5e-151 539.3 391 67.0
CANSAT21G2188 Cannabis sativa HOM05D004508 ORTHO05D005180 3.3e-151 538.9 382 69.1
Manes.01G073700 Manihot esculenta HOM05D004508 ORTHO05D005180 7.4e-151 537.7 391 69.1
Thecc.03G261800 Theobroma cacao HOM05D004508 ORTHO05D005180 7.4e-151 537.7 383 69.2
FAN08G3098 Fragaria x ananassa HOM05D004508 ORTHO05D005180 1.6e-150 536.6 382 68.3
Lsat_1_v5_gn_3_3920 Lactuca sativa HOM05D004508 ORTHO05D005180 1.6e-150 536.6 381 69.3
Nitab4.5_0003534g0110 Nicotiana tabacum HOM05D004508 ORTHO05D005180 2.8e-150 535.8 384 69.3
FvH4_5g00670 Fragaria vesca HOM05D004508 ORTHO05D005180 4.8e-150 535.0 382 68.3
EL10Ac5g12616 Beta vulgaris HOM05D004508 ORTHO05D005180 6.3e-150 534.6 373 69.2
HanXRQChr17g0549071 Helianthus annuus HOM05D004508 ORTHO05D005180 6.3e-150 534.6 383 69.5
SGA_v2.0_scaffold25G11118 Striga asiatica HOM05D004508 ORTHO05D005180 6.3e-150 534.6 374 70.3
SGA_v2.0_scaffold146G36178 Striga asiatica HOM05D004508 ORTHO05D005180 8.2e-150 534.3 374 70.3
Ciclev10020216m.g Citrus clementina HOM05D004508 ORTHO05D005180 1.8e-149 533.1 413 65.1
Haze_02980 Corylus avellana HOM05D004508 ORTHO05D005180 2.4e-149 532.7 407 66.8
Duzib205G1463 Durio zibethinus HOM05D004508 ORTHO05D005180 2.4e-149 532.7 380 70.3
Potri.001G117700 Populus trichocarpa HOM05D004508 ORTHO05D005180 2.4e-149 532.7 382 69.9
FAN13G3174 Fragaria x ananassa HOM05D004508 ORTHO05D005180 3.1e-149 532.3 382 67.8
MD04G1079500 Malus domestica HOM05D004508 ORTHO05D005180 3.1e-149 532.3 382 68.6
FAN18G1402 Fragaria x ananassa HOM05D004508 ORTHO05D005180 4.1e-149 531.9 382 68.1
Aa31LG11G5140 Aethionema arabicum HOM05D004508 ORTHO05D005180 6.9e-149 531.2 383 68.1
Solyc08g079470.3 Solanum lycopersicum HOM05D004508 ORTHO05D005180 9.0e-149 530.8 390 68.5
Aa31LG9G10340 Aethionema arabicum HOM05D004508 ORTHO05D005180 1.2e-148 530.4 383 67.9
Gohir.A12G221000 Gossypium hirsutum HOM05D004508 ORTHO05D005180 2.0e-148 529.6 379 69.1
GSVIVG01004911001 Vitis vinifera HOM05D004508 ORTHO05D005180 2.0e-148 529.6 373 71.0
Eucgr.D01989 Eucalyptus grandis HOM05D004508 ORTHO05D005180 7.7e-148 527.7 381 66.9
Gohir.D12G223300 Gossypium hirsutum HOM05D004508 ORTHO05D005180 7.7e-148 527.7 379 69.1
Nitab4.5_0005465g0020 Nicotiana tabacum HOM05D004508 ORTHO05D005180 7.7e-148 527.7 384 68.8
PGR031G2216 Punica granatum HOM05D004508 ORTHO05D005180 1.7e-147 526.6 381 67.5
CsaV3_3G003200 Cucumis sativus L. HOM05D004508 ORTHO05D005180 2.2e-147 526.2 376 68.6
SalBow5G3960 Salvia bowleyana HOM05D004508 ORTHO05D005180 2.2e-147 526.2 387 67.2
Aa31LG11G5170 Aethionema arabicum HOM05D004508 ORTHO05D005180 2.9e-147 525.8 395 66.3
FAN04G0404 Fragaria x ananassa HOM05D004508 ORTHO05D005180 2.9e-147 525.8 375 68.0
Gorai.008G239600 Gossypium raimondii HOM05D004508 ORTHO05D005180 2.9e-147 525.8 379 68.9
Ah.12g058230 Amaranthus hybridus HOM05D004508 ORTHO05D005180 5.0e-147 525.0 375 68.8
SalBow5G2183 Salvia bowleyana HOM05D004508 ORTHO05D005180 6.5e-147 524.6 387 67.2
Lj2g0024595 Lotus japonicus HOM05D004508 ORTHO05D005180 3.2e-146 522.3 385 66.5
Nitab4.5_0007591g0010 Nicotiana tabacum HOM05D004508 ORTHO05D005180 4.2e-146 521.9 384 68.0
CARHR254050 Cardamine hirsuta HOM05D004508 ORTHO05D005180 1.6e-145 520.0 383 66.6
PSO782G0229 Papaver somniferum HOM05D004508 ORTHO05D005180 1.6e-145 520.0 372 68.0
PGSC0003DMG400003935 Solanum tuberosum HOM05D004508 ORTHO05D005180 1.6e-145 520.0 372 69.6
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea HOM05D004508 ORTHO05D005180 3.6e-145 518.8 393 65.6
Sopen08g027840 Solanum pennellii HOM05D004508 ORTHO05D005180 3.6e-145 518.8 372 69.9
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea HOM05D004508 ORTHO05D005180 1.0e-144 517.3 393 65.4
Ca_16218_v3 Cicer arietinum L. HOM05D004508 ORTHO05D005180 3.9e-144 515.4 383 66.1
Cc08_g13230 Coffea canephora HOM05D004508 ORTHO05D005180 5.1e-144 515.0 370 67.6
CAN.G630.82 Capsicum annuum HOM05D004508 ORTHO05D005180 6.7e-144 514.6 388 65.2
Sp6g05370 Schrenkiella parvula HOM05D004508 ORTHO05D005180 6.7e-144 514.6 383 66.1
Thhalv10028714m.g Eutrema salsugineum HOM05D004508 ORTHO05D005180 1.1e-143 513.8 383 65.3
Glyma.11G029800 Glycine max HOM05D004508 ORTHO05D005180 3.3e-143 512.3 382 66.2
BcaC04g21205 Brassica carinata HOM05D004508 ORTHO05D005180 9.7e-143 510.8 384 65.6
C09p34340 Brassica napus HOM05D004508 ORTHO05D005180 9.7e-143 510.8 384 65.6
Sed0020035 Sechium edule HOM05D004508 ORTHO05D005180 2.8e-142 509.2 367 68.4
AT4G12130 Arabidopsis thaliana HOM05D004508 ORTHO05D005180 3.7e-142 508.8 383 65.3
AL6G47050 Arabidopsis lyrata HOM05D004508 ORTHO05D005180 4.8e-142 508.4 383 65.5
BolC9t56277H Brassica oleracea HOM05D004508 ORTHO05D005180 4.8e-142 508.4 382 65.4
BraA03t12150Z Brassica rapa HOM05D004508 ORTHO05D005180 4.8e-142 508.4 371 67.1
Medtr3g078637 Medicago truncatula HOM05D004508 ORTHO05D005180 4.8e-142 508.4 382 64.4
Phvul.002G060100 Phaseolus vulgaris HOM05D004508 ORTHO05D005180 4.8e-142 508.4 382 65.2
TWI81G0341 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 6.3e-142 508.1 395 65.6
Carub.0006s3132 Capsella rubella HOM05D004508 ORTHO05D005180 1.8e-141 506.5 383 65.0
BcaB01g01727 Brassica carinata HOM05D004508 ORTHO05D005180 2.4e-141 506.1 383 65.0
TWI60G0362 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 2.6e-140 502.7 379 65.4
A09p27030 Brassica napus HOM05D004508 ORTHO05D005180 3.4e-140 502.3 384 65.4
BraA09t38274Z Brassica rapa HOM05D004508 ORTHO05D005180 3.4e-140 502.3 384 65.4
Gorai.003G166400 Gossypium raimondii HOM05D004508 ORTHO05D005180 1.0e-139 500.7 378 68.0
BcaB01g02657 Brassica carinata HOM05D004508 ORTHO05D005180 6.5e-139 498.0 371 66.0
Peaxi162Scf00271g00023 Petunia axillaris HOM05D004508 ORTHO05D005180 5.5e-138 495.0 387 64.9
BcaC01g04604 Brassica carinata HOM05D004508 ORTHO05D005180 2.1e-137 493.0 380 64.5
BolC3t15891H Brassica oleracea HOM05D004508 ORTHO05D005180 2.1e-137 493.0 368 66.0
ECA246G1898 Erigeron canadensis HOM05D004508 ORTHO05D005180 5.1e-136 488.4 396 61.4
PSO478G4546 Papaver somniferum HOM05D004508 ORTHO05D005180 5.1e-136 488.4 442 57.7
Lj4g0011407 Lotus japonicus HOM05D004508 ORTHO05D005180 2.6e-135 486.1 374 65.0
ECA234G2416 Erigeron canadensis HOM05D004508 ORTHO05D005180 1.7e-134 483.4 373 64.6
AUR62010510 Chenopodium quinoa HOM05D004508 ORTHO05D005180 1.1e-133 480.7 380 62.9
VMungo1215G0237 Vigna mungo HOM05D004508 ORTHO05D005180 1.2e-132 477.2 356 65.4
Lalb_Chr25g0283101 Lupinus albus HOM05D004508 ORTHO05D005180 3.5e-132 475.7 393 60.3
ATR0757G012 Amborella trichopoda HOM05D004508 ORTHO05D005180 7.7e-132 474.6 378 62.2
COL.COLO4_23880 Corchorus olitorius HOM05D004508 ORTHO05D005180 1.1e-130 470.7 383 62.7
CDE04G2826 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 3.2e-130 469.2 376 60.9
HPP92_014982 Vanilla planifolia HOM05D004508 ORTHO05D005180 2.7e-129 466.1 400 58.8
HPP92_014947 Vanilla planifolia HOM05D004508 ORTHO05D005180 3.6e-129 465.7 400 58.8
Sabra01G0090400 Salix brachista HOM05D004508 ORTHO05D005180 1.0e-128 464.2 384 63.3
Oeu016511.2 Olea europaea HOM05D004508 ORTHO05D005180 3.1e-125 452.6 394 59.6
C03p35810 Brassica napus HOM05D004508 ORTHO05D005180 2.0e-124 449.9 345 66.1
unitig_8.g3903 Utricularia gibba HOM05D004508 ORTHO05D005180 3.5e-124 449.1 364 59.9
SEGI_30484 Sequoiadendron giganteum HOM05D004508 ORTHO05D005180 4.5e-124 448.7 383 56.4
Zm00001eb377920 Zea mays HOM05D004508 ORTHO05D005180 2.7e-121 439.5 382 57.3
Os06g0134800 Oryza sativa ssp. japonica HOM05D004508 ORTHO05D005180 4.7e-121 438.7 386 56.7
Nn2g12338 Nelumbo nucifera HOM05D004508 ORTHO05D005180 7.0e-117 424.9 293 71.0
Pp3c14_15790 Physcomitrium patens HOM05D004508 ORTHO05D005180 6.1e-113 411.8 377 54.9
Pp3c2_10920 Physcomitrium patens HOM05D004508 ORTHO05D005180 1.4e-112 410.6 383 53.8
CiPaw.12G105000 Carya illinoinensis HOM05D004508 ORTHO05D005180 4.8e-110 402.1 381 56.4
Psat1g081320 Pisum sativum HOM05D004508 ORTHO05D005180 2.4e-109 399.8 283 68.2
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis HOM05D004508 ORTHO05D005180 3.1e-109 399.4 383 53.8
Psat5g109880 Pisum sativum HOM05D004508 ORTHO05D005180 3.1e-109 399.4 283 67.8
Dinv39078 Davidia involucrata HOM05D004508 ORTHO05D005180 3.5e-108 396.0 372 57.8
MBI04_g30221_MAGBIO Magnolia biondii HOM05D004508 ORTHO05D005180 1.9e-106 390.2 617 40.4
SMO165G0061 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 3.3e-106 389.4 372 53.8
Mapoly0014s0047 Marchantia polymorpha HOM05D004508 ORTHO05D005180 1.2e-103 380.9 384 50.0
Glyma.01G212000 Glycine max HOM05D004508 ORTHO05D005180 8.3e-102 374.8 262 69.1
C07p28450 Brassica napus HOM05D004508 ORTHO05D005180 2.3e-99 366.7 261 66.7
VMungo1215G2974 Vigna mungo HOM05D004508 ORTHO05D005180 6.6e-99 365.2 256 68.0
SMO230G0075 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 2.6e-95 353.2 364 48.6
AUR62017391 Chenopodium quinoa HOM05D004508 ORTHO05D005180 5.8e-95 352.1 237 70.5
Oeu022318.1 Olea europaea HOM05D004508 ORTHO05D005180 2.2e-94 350.1 256 67.6
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis HOM05D004508 ORTHO05D005180 5.4e-93 345.5 383 50.1
PSO017G0573 Papaver somniferum HOM05D004508 ORTHO05D005180 5.4e-93 345.5 246 67.9
A03p29560 Brassica napus HOM05D004508 ORTHO05D005180 4.6e-92 342.4 253 64.8
BcaC06g34438 Brassica carinata HOM05D004508 ORTHO05D005180 9.5e-90 334.7 242 64.9
Migut.A00834 Erythranthe guttata HOM05D004508 ORTHO05D005180 9.5e-90 334.7 252 65.9
BolC7t43385H Brassica oleracea HOM05D004508 ORTHO05D005180 1.2e-89 334.3 241 64.7
CBR_g46688 Chara braunii HOM05D004508 ORTHO05D005180 1.9e-85 320.5 408 43.6
Gohir.D03G157900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 8.6e-83 311.6 247 66.0
Eucgr.D02019 Eucalyptus grandis HOM05D004508 ORTHO05D005180 3.7e-78 296.2 360 45.8
MELO3C013985.2 Cucumis melo HOM05D004508 ORTHO05D005180 3.2e-77 293.1 193 72.0
TPR.G214 Trifolium pratense HOM05D004508 ORTHO05D005180 8.7e-59 231.9 155 70.3
Gohir.A03G011900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 2.1e-57 227.3 272 51.1
Lsat_1_v5_gn_3_76480 Lactuca sativa HOM05D004508 ORTHO05D005180 1.1e-53 214.9 216 56.5
AagrBONN_evm.TU.Sc2ySwM_344.731 Anthoceros agrestis HOM05D004508 ORTHO05D005180 4.8e-49 199.5 216 46.8
vmacro17466 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 2.2e-46 190.7 132 68.9
MELO3C021762.2 Cucumis melo HOM05D004508 ORTHO05D005180 4.5e-39 166.4 115 68.7
CSS0024785 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 6.5e-38 162.5 105 74.3
MCO07G558 Micromonas commoda HOM05D004508 ORTHO05D005180 7.1e-37 159.1 403 32.5
VMungo1215G1224 Vigna mungo HOM05D004508 ORTHO05D005180 7.1e-37 159.1 130 61.5
Duzib084G0179 Durio zibethinus HOM05D004508 ORTHO05D005180 4.8e-33 146.4 169 48.5
Nn8g40647 Nelumbo nucifera HOM05D004508 ORTHO05D005180 9.0e-32 142.1 174 48.9
PRCOL_00002067 Prasinoderma coloniale HOM05D004508 ORTHO05D005180 3.8e-30 136.7 367 30.0
Cre10.g459000 Chlamydomonas reinhardtii HOM05D004508 ORTHO05D005180 4.8e-25 119.8 282 30.1
BolC6t40022H Brassica oleracea HOM05D004508 ORTHO05D005180 5.5e-21 106.3 99 55.6
Cfa023844 Carpinus fangiana HOM05D004508 ORTHO05D005180 2.3e-19 100.9 292 28.4
SGA_v2.0_scaffold120G32815 Striga asiatica HOM05D004508 ORTHO05D005180 6.7e-19 99.4 79 58.2
BcaC06g35234 Brassica carinata HOM05D004508 ORTHO05D005180 1.1e-18 98.6 70 61.4
BolC7t43387H Brassica oleracea HOM05D004508 ORTHO05D005180 2.8e-17 94.0 93 53.8
C03p35830 Brassica napus HOM05D004508 ORTHO05D005180 3.1e-16 90.5 93 51.6
C07p28470 Brassica napus HOM05D004508 ORTHO05D005180 3.5e-15 87.0 93 50.5
BolC3t15893H Brassica oleracea HOM05D004508 ORTHO05D005180 1.1e-08 65.5 43 58.1
CDE04G3100 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 7.0e-08 62.8 59 49.2
BolC3t15892H Brassica oleracea HOM05D004508 ORTHO05D005180 4.5e-07 60.1 52 53.8
BcaC06g34436 Brassica carinata HOM05D004508 ORTHO05D005180 5.0e-06 56.6 55 49.1


User provided reference genes

Program Settings