Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C237T7 Lonicera japonica HOM05D005348 ORTHO05D006635 0.0e+00 1121.3 542 100.0
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 8.2e-193 677.6 608 60.9
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 2.1e-188 662.9 605 57.9
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 1.8e-187 659.8 394 79.9
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 2.8e-185 652.5 614 57.2
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 1.2e-183 647.1 451 71.2
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 2.2e-182 642.9 606 56.9
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 2.5e-178 629.4 390 75.9
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 5.7e-178 628.2 467 66.6
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 5.7e-178 628.2 396 75.0
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 1.7e-177 626.7 468 66.7
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 3.7e-177 625.5 407 74.9
Potri.001G109000 Populus trichocarpa HOM05D005348 ORTHO05D006635 6.3e-177 624.8 397 74.6
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 1.1e-176 624.0 405 72.6
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 1.1e-176 624.0 393 75.3
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 4.5e-175 618.6 386 76.9
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 7.7e-175 617.8 390 74.9
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 1.3e-174 617.1 397 73.8
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 1.7e-174 616.7 400 73.5
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 2.9e-174 615.9 389 74.0
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 1.1e-173 614.0 398 74.1
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 1.9e-173 613.2 386 75.9
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 7.2e-173 611.3 391 73.7
Peaxi162Scf00714g00430 Petunia axillaris HOM05D005348 ORTHO05D006635 2.1e-172 609.8 376 78.2
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 2.7e-172 609.4 426 68.5
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 2.7e-172 609.4 384 74.7
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 1.0e-171 607.4 391 73.7
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 1.8e-171 606.7 395 71.6
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 2.0e-170 603.2 390 73.3
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 2.6e-170 602.8 537 58.8
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 3.3e-170 602.4 426 67.6
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 5.7e-170 601.7 612 53.4
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 5.7e-170 601.7 386 75.9
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 5.7e-170 601.7 396 71.7
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 1.7e-169 600.1 370 78.1
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 2.8e-169 599.4 393 71.5
MELO3C005635.2 Cucumis melo HOM05D005348 ORTHO05D006635 3.7e-169 599.0 447 66.2
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 1.4e-168 597.0 395 70.4
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 1.4e-168 597.0 393 70.7
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 2.4e-168 596.3 393 71.8
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 3.1e-168 595.9 393 71.2
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 1.6e-167 593.6 465 64.1
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 1.6e-167 593.6 387 71.1
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 1.6e-167 593.6 406 70.4
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 3.5e-167 592.4 413 67.8
Glyma.09G081600 Glycine max HOM05D005348 ORTHO05D006635 1.7e-166 590.1 391 70.8
Glyma.15G240000 Glycine max HOM05D005348 ORTHO05D006635 1.7e-166 590.1 391 70.8
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 2.9e-166 589.3 395 68.9
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 3.8e-166 589.0 453 64.2
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 6.5e-166 588.2 423 68.6
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 5.5e-165 585.1 398 69.3
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 9.4e-165 584.3 391 70.1
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 9.4e-165 584.3 398 69.6
Glyma.11G026100 Glycine max HOM05D005348 ORTHO05D006635 1.2e-164 583.9 391 70.1
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 2.1e-164 583.2 391 69.8
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 3.6e-164 582.4 398 68.8
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 8.0e-164 581.3 395 70.1
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 8.0e-164 581.3 398 68.8
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 1.1e-162 577.4 398 68.8
Solyc08g080450.3 Solanum lycopersicum HOM05D005348 ORTHO05D006635 2.6e-162 576.2 438 66.4
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 3.3e-162 575.9 398 68.6
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 6.3e-161 571.6 398 67.3
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.4e-160 570.5 398 68.3
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 1.4e-160 570.5 426 65.3
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 3.1e-160 569.3 397 68.8
AUR62000200 Chenopodium quinoa HOM05D005348 ORTHO05D006635 4.1e-160 568.9 396 68.7
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 7.0e-160 568.2 426 64.8
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 7.0e-160 568.2 395 69.1
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 1.2e-159 567.4 752 45.2
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 5.9e-159 565.1 426 64.8
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 5.9e-159 565.1 426 64.8
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 1.3e-158 563.9 397 67.0
FAN18G1071 Fragaria x ananassa HOM05D005348 ORTHO05D006635 2.2e-158 563.1 477 60.6
AUR62006548 Chenopodium quinoa HOM05D005348 ORTHO05D006635 2.9e-158 562.8 436 63.1
CsaV3_5G003200 Cucumis sativus L. HOM05D005348 ORTHO05D006635 6.5e-158 561.6 406 68.2
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 2.3e-155 553.1 437 63.6
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.2e-154 550.8 391 69.1
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 3.5e-151 539.3 616 49.8
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 1.7e-150 537.0 393 65.4
AUR62037708 Chenopodium quinoa HOM05D005348 ORTHO05D006635 4.2e-149 532.3 376 68.6
Atru.chr9.1551 Acer truncatum HOM05D005348 ORTHO05D006635 2.3e-147 526.6 355 73.2
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 8.6e-142 508.1 397 63.0
Gohir.A11G021400 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.0e-139 501.1 330 72.7
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 4.0e-139 499.2 388 65.7
Gohir.D11G021100 Gossypium hirsutum HOM05D005348 ORTHO05D006635 7.5e-138 495.0 330 71.5
FvH4_5g01650 Fragaria vesca HOM05D005348 ORTHO05D006635 7.3e-133 478.4 372 64.5
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 6.2e-132 475.3 352 67.3
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 4.0e-131 472.6 446 54.0
Os09g0525700 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 2.0e-127 460.3 420 56.2
VMungo1215G1946 Vigna mungo HOM05D005348 ORTHO05D006635 4.6e-127 459.1 286 73.1
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 6.0e-127 458.8 347 66.0
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 8.1e-124 448.4 292 72.6
Ca_06657_v3 Cicer arietinum L. HOM05D005348 ORTHO05D006635 2.8e-116 423.3 364 59.3
COL.COLO4_05261 Corchorus olitorius HOM05D005348 ORTHO05D006635 8.4e-113 411.8 394 54.6
Nitab4.5_0002853g0050 Nicotiana tabacum HOM05D005348 ORTHO05D006635 1.1e-112 411.4 425 55.1
Zm00001eb103180 Zea mays HOM05D005348 ORTHO05D006635 6.4e-97 359.0 266 60.9
AUR62000197 Chenopodium quinoa HOM05D005348 ORTHO05D006635 5.5e-88 329.3 279 60.2
ATR0757G099 Amborella trichopoda HOM05D005348 ORTHO05D006635 1.5e-85 321.2 227 65.6
Cpa.g.sc29.190 Carica papaya HOM05D005348 ORTHO05D006635 1.6e-84 317.8 222 66.2
unitig_26.g9696 Utricularia gibba HOM05D005348 ORTHO05D006635 1.7e-81 307.8 361 50.1
HPP92_004952 Vanilla planifolia HOM05D005348 ORTHO05D006635 1.3e-68 265.0 210 64.3
Glyma.09G081420 Glycine max HOM05D005348 ORTHO05D006635 8.8e-62 242.3 132 78.0
FAN04G2632 Fragaria x ananassa HOM05D005348 ORTHO05D006635 6.5e-41 172.9 101 76.2
Prupe.8G039500 Prunus persica HOM05D005348 ORTHO05D006635 3.2e-40 170.6 209 45.0
Hund02677 Selenicereus undatus HOM05D005348 ORTHO05D006635 3.0e-38 164.1 91 82.4
Glyma.11G176306 Glycine max HOM05D005348 ORTHO05D006635 2.6e-37 161.0 109 68.8
HanXRQChr02g0035411 Helianthus annuus HOM05D005348 ORTHO05D006635 1.4e-35 155.2 126 56.3
Glyma.01G216933 Glycine max HOM05D005348 ORTHO05D006635 7.0e-35 152.9 133 58.6
VMungo1215G1628 Vigna mungo HOM05D005348 ORTHO05D006635 1.5e-29 135.2 81 76.5
Hund02678 Selenicereus undatus HOM05D005348 ORTHO05D006635 2.8e-28 131.0 109 62.4
Cre16.g674852 Chlamydomonas reinhardtii HOM05D005348 ORTHO05D006635 1.6e-26 125.2 408 27.2
Pp3c25_15230 Physcomitrium patens HOM05D005348 ORTHO05D006635 1.6e-26 125.2 342 27.5
Prupe.8G039400 Prunus persica HOM05D005348 ORTHO05D006635 2.7e-26 124.4 79 74.7
Mapoly0066s0032 Marchantia polymorpha HOM05D005348 ORTHO05D006635 7.3e-24 116.3 384 24.7
FAN04G3017 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.6e-23 114.0 80 68.8
CBR_g19301 Chara braunii HOM05D005348 ORTHO05D006635 6.4e-20 103.2 380 22.6
arahy.Tifrunner.gnm1.ann1.AXGL4F Arachis hypogaea HOM05D005348 ORTHO05D006635 7.8e-18 96.3 58 75.9
Mapoly0035s0066 Marchantia polymorpha HOM05D005348 ORTHO05D006635 9.5e-16 89.4 378 23.3
Cfa012113 Carpinus fangiana HOM05D005348 ORTHO05D006635 4.1e-11 73.9 87 44.8
AagrBONN_evm.TU.Sc2ySwM_368.2662 Anthoceros agrestis HOM05D005348 ORTHO05D006635 6.0e-10 70.1 323 22.6


User provided reference genes

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