Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 1.3e-263 912.9 596 100.0
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 5.5e-150 535.4 577 68.3
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 4.1e-145 519.2 600 64.7
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 1.0e-143 514.6 577 64.8
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 4.0e-140 502.7 570 64.6
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 5.7e-139 498.8 572 62.1
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 8.3e-138 495.0 594 65.3
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 1.6e-136 490.7 577 63.8
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 2.0e-136 490.3 574 63.9
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 3.8e-135 486.1 573 66.0
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 1.9e-134 483.8 596 51.2
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 1.9e-134 483.8 574 66.4
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 7.2e-134 481.9 571 65.3
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 3.4e-131 473.0 573 60.2
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 6.3e-130 468.8 590 57.8
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 1.2e-128 464.5 570 62.6
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 2.9e-127 459.9 604 60.3
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 6.6e-127 458.8 598 51.3
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 8.6e-127 458.4 608 58.9
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.1e-126 458.0 590 54.4
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.9e-126 457.2 570 63.0
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 2.3e-124 450.3 570 60.7
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 5.2e-124 449.1 573 55.7
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 8.9e-124 448.4 602 51.3
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 8.9e-124 448.4 573 62.0
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 1.5e-123 447.6 573 61.4
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 1.5e-123 447.6 569 62.9
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.6e-123 446.8 587 48.7
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 9.8e-123 444.9 575 56.0
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 1.7e-122 444.1 611 56.1
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 1.8e-121 440.7 600 59.8
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 4.1e-121 439.5 547 58.7
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.2e-120 438.0 591 43.1
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 2.0e-120 437.2 599 52.1
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 3.5e-120 436.4 577 61.2
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 4.5e-120 436.0 627 54.2
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 3.9e-119 433.0 580 61.0
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 3.9e-119 433.0 575 60.3
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 3.9e-119 433.0 610 55.7
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 1.5e-118 431.0 571 57.1
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 4.3e-118 429.5 571 62.2
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 2.1e-117 427.2 592 50.3
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 2.3e-116 423.7 549 63.0
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 1.2e-115 421.4 577 60.3
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 1.5e-115 421.0 571 52.4
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 2.6e-115 420.2 577 59.8
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 3.4e-115 419.9 582 58.9
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 4.9e-114 416.0 590 59.2
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 6.4e-114 415.6 571 58.5
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 2.4e-113 413.7 569 47.1
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 3.2e-113 413.3 489 68.7
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.0e-111 408.3 598 49.2
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 4.3e-110 402.9 587 55.5
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 5.6e-110 402.5 597 57.8
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 2.1e-109 400.6 591 58.0
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 4.0e-108 396.4 576 59.0
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 5.2e-108 396.0 572 50.0
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.5e-107 394.4 518 64.3
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 3.7e-106 389.8 585 50.4
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 3.7e-106 389.8 581 53.4
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 8.3e-106 388.7 360 68.9
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 7.3e-102 375.6 541 55.1
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 1.1e-100 371.7 519 54.3
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 1.8e-100 370.9 609 48.4
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 8.9e-100 368.6 584 55.5
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 1.3e-98 364.8 504 59.3
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 5.4e-97 359.4 581 54.4
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 5.4e-97 359.4 581 54.4
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 6.0e-96 355.9 582 54.5
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 5.1e-95 352.8 584 54.3
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 5.1e-95 352.8 584 54.3
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 6.6e-95 352.4 580 55.9
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 1.9e-94 350.9 584 54.1
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 1.9e-94 350.9 499 57.3
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 2.1e-93 347.4 582 54.0
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 1.1e-92 345.1 586 54.3
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.5e-91 341.3 397 59.2
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 2.0e-91 340.9 582 54.5
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 4.4e-91 339.7 590 53.9
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 1.4e-89 334.7 570 52.6
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 2.1e-88 330.9 597 46.6
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 2.3e-87 327.4 570 52.6
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 1.3e-82 311.6 551 46.5
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 2.1e-80 304.3 539 57.0
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.6e-77 294.7 581 41.0
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.6e-77 294.7 581 41.0
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 6.2e-77 292.7 467 60.0
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 2.4e-73 280.8 579 49.4
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 9.3e-73 278.9 578 51.2
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 1.3e-71 275.0 615 29.9
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 6.7e-71 272.7 579 48.2
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 1.6e-69 268.1 572 42.3
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 2.1e-69 267.7 576 49.7
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 1.5e-67 261.5 369 58.3
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 2.6e-67 260.8 574 48.3
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 1.0e-66 258.8 582 49.8
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 1.7e-66 258.1 595 42.2
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 1.4e-65 255.0 576 49.1
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 2.1e-64 251.1 492 45.3
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 4.6e-64 250.0 521 46.6
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 1.8e-63 248.1 524 51.5
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 1.1e-60 238.8 585 38.8
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 2.5e-57 227.6 594 46.3
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 8.2e-37 159.5 334 51.2
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.6e-35 154.5 306 33.3
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 3.3e-30 137.5 200 54.0
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.2e-27 129.0 154 50.6
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 5.0e-26 123.6 158 45.6
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.8e-18 97.4 204 55.9
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 1.8e-12 78.6 473 35.3
HanXRQChr09g0272151 Helianthus annuus HOM05D006572 ORTHO05D008181 6.6e-10 70.1 51 74.5
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 3.3e-09 67.8 52 63.5
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 9.5e-09 66.2 52 61.5
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 4.7e-08 63.9 46 69.6
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 1.0e-07 62.8 46 69.6
Hma1.2p1_0082F.1_g042550 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 1.4e-07 62.4 46 71.7
Actinidia27580 Actinidia chinensis HOM05D006572 ORTHO05D008181 1.5e-06 58.9 118 35.6
Medtr0050s0150 Medicago truncatula HOM05D006572 ORTHO05D008181 9.8e-06 56.2 106 38.7


User provided reference genes

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