Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C18T8 Lonicera japonica HOM05D002831 ORTHO05D004341 1.6e-71 273.1 185 100.0
Actinidia34155 Actinidia chinensis HOM05D002831 ORTHO05D004341 3.4e-13 79.3 213 44.1
Peaxi162Scf00444g00016 Petunia axillaris HOM05D002831 ORTHO05D004341 4.4e-13 79.0 212 44.8
Nitab4.5_0000572g0140 Nicotiana tabacum HOM05D002831 ORTHO05D004341 3.7e-12 75.9 212 42.9
Dinv28390 Davidia involucrata HOM05D002831 ORTHO05D004341 1.1e-11 74.3 213 41.8
CAN.G126.12 Capsicum annuum HOM05D002831 ORTHO05D004341 1.4e-11 73.9 213 43.2
Nitab4.5_0000084g0400 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.4e-11 73.9 212 42.0
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 5.4e-11 72.0 204 43.1
Lj1P1004T73 Lonicera japonica HOM05D002831 ORTHO05D004341 5.4e-11 72.0 204 36.8
CSS0004722 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 7.0e-11 71.6 213 36.6
CSS0021117 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 7.0e-11 71.6 213 36.6
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 3.5e-10 69.3 209 40.2
Actinidia08576 Actinidia chinensis HOM05D002831 ORTHO05D004341 5.9e-10 68.6 211 41.7
SalBow4G1512 Salvia bowleyana HOM05D002831 ORTHO05D004341 7.7e-10 68.2 50 82.0
CSS0012099 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 1.0e-09 67.8 214 38.8
CSS0034926 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 1.0e-09 67.8 214 38.8
Cc02_g02420 Coffea canephora HOM05D002831 ORTHO05D004341 1.7e-09 67.0 215 41.9
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 2.3e-09 66.6 194 41.8
Sopen03g003930 Solanum pennellii HOM05D002831 ORTHO05D004341 2.3e-09 66.6 153 48.4
MSTRG.27090 Avicennia marina HOM05D002831 ORTHO05D004341 2.9e-09 66.2 50 82.0
Rhsim09G0200400 Rhododendron simsii HOM05D002831 ORTHO05D004341 2.9e-09 66.2 50 80.0
Peaxi162Scf00618g00748 Petunia axillaris HOM05D001680 ORTHO05D004341 5.0e-09 65.5 214 39.3
Cpa.g.sc107.104 Carica papaya HOM05D002831 ORTHO05D004341 6.5e-09 65.1 204 41.2
SGA_v2.0_scaffold113G31691 Striga asiatica HOM05D002831 ORTHO05D008967 8.6e-09 64.7 50 82.0
Gohir.D09G177200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.1e-08 64.3 40 92.5
PGSC0003DMG400028898 Solanum tuberosum HOM05D002831 ORTHO05D004341 1.1e-08 64.3 211 41.2
Oeu060465.1 Olea europaea HOM05D002831 ORTHO05D004341 1.9e-08 63.5 50 78.0
CAN.G204.16 Capsicum annuum HOM05D002831 ORTHO05D004341 2.5e-08 63.2 50 78.0
Migut.F01087 Erythranthe guttata HOM05D002831 ORTHO05D004341 2.5e-08 63.2 50 74.0
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 2.5e-08 63.2 50 78.0
Sopen06g012030 Solanum pennellii HOM05D002831 ORTHO05D004341 4.2e-08 62.4 211 41.2
PGSC0003DMG400010167 Solanum tuberosum HOM05D002831 ORTHO05D004341 4.2e-08 62.4 152 48.0
COL.COLO4_10060 Corchorus olitorius HOM05D002831 ORTHO05D004341 5.5e-08 62.0 202 40.6
Gohir.A12G255500 Gossypium hirsutum HOM05D002831 ORTHO05D004341 5.5e-08 62.0 198 42.4
SEGI_15574 Sequoiadendron giganteum HOM05D002831 ORTHO05D004341 5.5e-08 62.0 44 79.5
Actinidia31838 Actinidia chinensis HOM05D002831 ORTHO05D004341 7.2e-08 61.6 50 76.0
MSTRG.74 Avicennia marina HOM05D002831 ORTHO05D004341 7.2e-08 61.6 50 78.0
Duzib084G1013 Durio zibethinus HOM05D002831 ORTHO05D004341 7.2e-08 61.6 202 41.1
unitig_0.g2470 Utricularia gibba HOM05D002831 ORTHO05D004341 7.2e-08 61.6 49 75.5
Gohir.A11G011900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 9.5e-08 61.2 42 88.1
Gohir.D11G011100 Gossypium hirsutum HOM05D002831 ORTHO05D004341 9.5e-08 61.2 42 88.1
Gorai.007G012600 Gossypium raimondii HOM05D002831 ORTHO05D004341 9.5e-08 61.2 42 88.1
Gohir.D12G256900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.2e-07 60.8 197 41.6
Gorai.008G275100 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.2e-07 60.8 197 41.6
Sabra17G0120100 Salix brachista HOM05D002831 ORTHO05D004341 1.2e-07 60.8 204 41.7
TAR374G0609 Trochodendron aralioides HOM05D002831 ORTHO05D004341 1.2e-07 60.8 149 47.0
PSO478G4817 Papaver somniferum HOM05D002831 ORTHO05D004341 2.1e-07 60.1 181 35.9
Potri.017G143215 Populus trichocarpa HOM05D002831 ORTHO05D004341 2.1e-07 60.1 202 40.6
Thecc.03G183700 Theobroma cacao HOM05D002831 ORTHO05D004341 2.1e-07 60.1 201 40.8
Gohir.A09G182600 Gossypium hirsutum HOM05D002831 ORTHO05D004341 2.8e-07 59.7 40 90.0
Gorai.006G199200 Gossypium raimondii HOM05D002831 ORTHO05D004341 2.8e-07 59.7 40 90.0
Nitab4.5_0003825g0080 Nicotiana tabacum HOM05D002831 ORTHO05D004341 2.8e-07 59.7 213 39.4
unitig_37.g11969 Utricularia gibba HOM05D002831 ORTHO05D004341 2.8e-07 59.7 50 76.0
DCAR_020268 Daucus carota HOM05D002831 ORTHO05D004341 3.6e-07 59.3 214 32.2
Potri.004G079900 Populus trichocarpa HOM05D002831 ORTHO05D004341 3.6e-07 59.3 203 39.9
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 3.6e-07 59.3 198 41.9
Atru.chr1.379 Acer truncatum HOM05D002831 ORTHO05D004341 4.7e-07 58.9 41 87.8
Atru.ctg97_1.16 Acer truncatum HOM05D002831 ORTHO05D004341 4.7e-07 58.9 41 87.8
Duzib068G1050 Durio zibethinus HOM05D002831 ORTHO05D004341 4.7e-07 58.9 201 40.3
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 4.7e-07 58.9 50 74.0
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 4.7e-07 58.9 41 87.8
TWI23G0387 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 4.7e-07 58.9 204 34.3
Thhalv10027473m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 6.1e-07 58.5 181 34.3
PSO782G2858 Papaver somniferum HOM05D002831 ORTHO05D004341 8.0e-07 58.2 196 34.2
Duzib205G1365 Durio zibethinus HOM05D002831 ORTHO05D004341 1.0e-06 57.8 198 40.4
Glyma.09G132500 Glycine max HOM05D002831 ORTHO05D004341 1.0e-06 57.8 40 87.5
THA.LOC104800271 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 1.0e-06 57.8 48 70.8
Lalb_Chr02g0141231 Lupinus albus HOM05D002831 ORTHO05D004341 1.8e-06 57.0 41 85.4
TWI14G0525 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 1.8e-06 57.0 41 85.4
Aqoxy7G00243 Aquilegia oxysepala HOM05D002831 ORTHO05D004341 2.3e-06 56.6 202 42.6
EL10Ac3g05428 Beta vulgaris HOM05D002831 ORTHO05D004341 2.3e-06 56.6 41 82.9
AUR62021127 Chenopodium quinoa HOM05D002831 ORTHO05D004341 2.3e-06 56.6 41 82.9
AUR62031417 Chenopodium quinoa HOM05D002831 ORTHO05D004341 2.3e-06 56.6 41 82.9
DCAR_009393 Daucus carota HOM05D002831 ORTHO05D004341 2.3e-06 56.6 50 74.0
Oeu036905.1 Olea europaea HOM05D002831 ORTHO05D004341 2.3e-06 56.6 215 39.5
Sc19g0001290 Simmondsia chinensis HOM05D002831 ORTHO05D004341 2.3e-06 56.6 41 82.9
Ah.13g069150 Amaranthus hybridus HOM05D002831 ORTHO05D004341 4.0e-06 55.8 50 76.0
AL8G27020 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 4.0e-06 55.8 41 80.5
Carub.0008s1268 Capsella rubella HOM05D002831 ORTHO05D004341 4.0e-06 55.8 41 80.5
TWI39G0102 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 4.0e-06 55.8 42 88.1
Ciclev10005857m.g Citrus clementina HOM05D002831 ORTHO05D004341 5.2e-06 55.5 202 39.1
Nn1g01625 Nelumbo nucifera HOM05D002831 ORTHO05D004341 5.2e-06 55.5 50 72.0
THA.LOC104811959 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 5.2e-06 55.5 40 85.0


User provided reference genes

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