Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C151T6 Lonicera japonica HOM05D008023 ORTHO05D010897 9.8e-185 650.2 380 100.0
Lj1A833T49 Lonicera japonica HOM05D008023 ORTHO05D002944 5.2e-45 186.0 505 34.7
Dinv14970 Davidia involucrata HOM05D008023 ORTHO05D002944 3.9e-32 143.3 221 42.5
Actinidia18792 Actinidia chinensis HOM05D008023 ORTHO05D002944 5.6e-31 139.4 522 29.3
Cfa019590 Carpinus fangiana HOM05D008023 ORTHO05D002944 1.3e-24 118.2 508 27.8
vmacro09501 Vaccinium macrocarpon HOM05D008023 ORTHO05D002944 1.3e-24 118.2 512 28.5
Rhsim04G0024700 Rhododendron simsii HOM05D008023 ORTHO05D002944 6.6e-24 115.9 506 27.7
Actinidia35220 Actinidia chinensis HOM05D008023 ORTHO05D002944 8.7e-24 115.5 517 27.9
CSS0035750 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 1.9e-23 114.4 244 36.1
Cc05_g11360 Coffea canephora HOM05D008023 ORTHO05D002944 2.8e-22 110.5 278 33.5
Glyma.06G231200 Glycine max HOM05D008023 ORTHO05D002944 3.6e-22 110.2 244 32.8
GSVIVG01014227001 Vitis vinifera HOM05D008023 ORTHO05D002944 2.6e-20 104.0 256 33.2
Cc01_g02410 Coffea canephora HOM05D008023 ORTHO05D002944 7.6e-20 102.4 244 33.6
Potri.001G376800 Populus trichocarpa HOM05D008023 ORTHO05D002944 1.3e-19 101.7 185 39.5
Manes.15G092100 Manihot esculenta HOM05D008023 ORTHO05D002944 5.4e-18 96.3 176 37.5
Atru.chr2.2242 Acer truncatum HOM05D008023 ORTHO05D002944 7.1e-18 95.9 507 27.2
Ciclev10008068m.g Citrus clementina HOM05D008023 ORTHO05D002944 1.2e-17 95.1 512 25.2
Lj3g0002978 Lotus japonicus HOM05D008023 ORTHO05D002944 3.5e-17 93.6 476 25.2
Gohir.D11G306100 Gossypium hirsutum HOM05D008023 ORTHO05D002944 4.6e-17 93.2 155 41.3
SGA_v2.0_scaffold73G24197 Striga asiatica HOM05D008023 ORTHO05D002944 4.6e-17 93.2 430 26.3
Lsat_1_v5_gn_9_99560 Lactuca sativa HOM05D029722 ORTHO05D002944 7.9e-17 92.4 278 32.0
QL08p026875 Quercus lobata HOM05D008023 ORTHO05D002944 1.0e-16 92.0 236 32.6
Sabra16G0248200 Salix brachista HOM05D008023 ORTHO05D002944 1.8e-16 91.3 502 25.9
MSTRG.14955 Avicennia marina HOM05D008023 ORTHO05D002944 6.7e-16 89.4 210 34.3
Prupe.4G170200 Prunus persica HOM05D008023 ORTHO05D002944 1.1e-15 88.6 150 40.7
CiPaw.11G162800 Carya illinoinensis HOM05D008023 ORTHO05D002944 1.9e-15 87.8 428 26.9
Duzib213G0674 Durio zibethinus HOM05D008023 ORTHO05D002944 2.5e-15 87.4 214 33.6
CAN.G162.20 Capsicum annuum HOM05D018586 ORTHO05D002944 3.3e-15 87.0 95 46.3
Nitab4.5_0000246g0140 Nicotiana tabacum HOM05D018586 ORTHO05D002944 3.3e-15 87.0 112 42.9
Nitab4.5_0006539g0020 Nicotiana tabacum HOM05D018586 ORTHO05D002944 4.3e-15 86.7 112 42.0
PGSC0003DMG400012394 Solanum tuberosum HOM05D018586 ORTHO05D002944 4.3e-15 86.7 117 41.9
Thecc.07G105200 Theobroma cacao HOM05D008023 ORTHO05D002944 4.3e-15 86.7 120 46.7
ClCG11G017550 Citrullus lanatus HOM05D008023 ORTHO05D002944 7.4e-15 85.9 114 45.6
Manes.03G103000 Manihot esculenta HOM05D008023 ORTHO05D002944 9.6e-15 85.5 194 33.5
Solyc07g062640.3 Solanum lycopersicum HOM05D018586 ORTHO05D002944 9.6e-15 85.5 117 41.0
Sopen07g030870 Solanum pennellii HOM05D018586 ORTHO05D002944 9.6e-15 85.5 117 41.0
Lalb_Chr19g0133891 Lupinus albus HOM05D008023 ORTHO05D002944 1.6e-14 84.7 133 42.9
CiPaw.12G114700 Carya illinoinensis HOM05D008023 ORTHO05D002944 2.8e-14 84.0 471 24.0
Oeu051114.4 Olea europaea HOM05D008023 ORTHO05D002944 4.8e-14 83.2 222 32.0
Duzib170G0431 Durio zibethinus HOM05D008023 ORTHO05D002944 6.2e-14 82.8 117 44.4
MELO3C025631.2 Cucumis melo HOM05D008023 ORTHO05D002944 8.1e-14 82.4 140 37.9
Psat4g175400 Pisum sativum HOM05D008023 ORTHO05D002944 8.1e-14 82.4 212 30.7
TWI39G0037 Tripterygium wilfordii HOM05D008023 ORTHO05D002944 8.1e-14 82.4 204 32.4
CANSAT35G0556 Cannabis sativa HOM05D008023 ORTHO05D010897 1.1e-13 82.0 149 38.9
VMungo1127G0722 Vigna mungo HOM05D008023 ORTHO05D002944 1.1e-13 82.0 260 30.0
Peaxi162Scf00069g02022 Petunia axillaris HOM05D018586 ORTHO05D002944 3.1e-13 80.5 117 39.3
CsaV3_4G033230 Cucumis sativus L. HOM05D008023 ORTHO05D010897 9.0e-13 79.0 137 38.7
Gohir.A11G287000 Gossypium hirsutum HOM05D008023 ORTHO05D002944 1.5e-12 78.2 120 41.7
RcHm_v2.0_Chr5g0031461 Rosa chinensis HOM05D008023 ORTHO05D002944 2.0e-12 77.8 150 38.7
FvH4_3g18640 Fragaria vesca HOM05D008023 ORTHO05D002944 5.8e-12 76.3 193 33.7
FAN11G0626 Fragaria x ananassa HOM05D008023 ORTHO05D002944 5.8e-12 76.3 193 33.7
Phvul.011G159200 Phaseolus vulgaris HOM05D008023 ORTHO05D002944 7.6e-12 75.9 258 31.8
Gorai.009G372300 Gossypium raimondii HOM05D008023 ORTHO05D002944 1.3e-11 75.1 158 35.4
DCAR_013145 Daucus carota HOM05D008023 ORTHO05D002944 1.7e-11 74.7 114 43.0
FAN21G3564 Fragaria x ananassa HOM05D008023 ORTHO05D002944 2.9e-11 73.9 116 41.4
TPR.G12029 Trifolium pratense HOM05D008023 ORTHO05D002944 2.9e-11 73.9 267 28.1
Cpa.g.sc131.62 Carica papaya HOM05D008023 ORTHO05D002944 3.8e-11 73.6 229 31.0
FAN16G2995 Fragaria x ananassa HOM05D008023 ORTHO05D002944 4.9e-11 73.2 116 42.2
MD03G1240400 Malus domestica HOM05D008023 ORTHO05D002944 6.5e-11 72.8 263 29.3
MD11G1259700 Malus domestica HOM05D008023 ORTHO05D002944 6.5e-11 72.8 127 41.7
CSS0022203 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 8.4e-11 72.4 89 48.3
FAN25G1709 Fragaria x ananassa HOM05D008023 ORTHO05D002944 8.4e-11 72.4 116 41.4
CSS0041377 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 3.2e-10 70.5 89 47.2
Haze_09349 Corylus avellana HOM05D008023 ORTHO05D002944 4.2e-10 70.1 449 25.4
Medtr8g463800 Medicago truncatula HOM05D008023 ORTHO05D002944 7.1e-10 69.3 265 29.1
PGR083G0067 Punica granatum HOM05D008023 ORTHO05D010897 7.1e-10 69.3 219 31.1
Sp1g15860 Schrenkiella parvula HOM05D009038 ORTHO05D010897 7.1e-10 69.3 144 38.2
CARHR018390 Cardamine hirsuta HOM05D009038 ORTHO05D010897 1.2e-09 68.6 270 28.9
Gohir.D05G344300 Gossypium hirsutum HOM05D008023 ORTHO05D002944 1.2e-09 68.6 251 29.5
Gorai.007G325900 Gossypium raimondii HOM05D008023 ORTHO05D002944 1.6e-09 68.2 155 35.5
Eucgr.L01514 Eucalyptus grandis HOM05D008023 ORTHO05D010897 2.1e-09 67.8 93 43.0
AL1G30140 Arabidopsis lyrata HOM05D009038 ORTHO05D010897 7.9e-09 65.9 131 35.9
Carub.0001s1751 Capsella rubella HOM05D009038 ORTHO05D010897 7.9e-09 65.9 247 26.3
TAR626G0818 Trochodendron aralioides HOM05D008023 ORTHO05D002944 7.9e-09 65.9 133 39.1
Aqoxy4G00427 Aquilegia oxysepala HOM05D004563 ORTHO05D002944 1.0e-08 65.5 456 24.8
Eucgr.F01214 Eucalyptus grandis HOM05D008023 ORTHO05D010897 1.0e-08 65.5 273 25.3
SalBow8G1085 Salvia bowleyana HOM05D008023 ORTHO05D002944 1.0e-08 65.5 273 26.0
TAR624G1329 Trochodendron aralioides HOM05D004563 ORTHO05D002944 1.0e-08 65.5 454 24.0
FvH4_3g25880 Fragaria vesca HOM05D008023 ORTHO05D010897 1.3e-08 65.1 87 43.7
CSS0038794 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 1.8e-08 64.7 235 30.6
HanXRQChr17g0548881 Helianthus annuus HOM05D029722 ORTHO05D035124 3.0e-08 63.9 301 26.6
Ca_23071_v3 Cicer arietinum L. HOM05D008023 ORTHO05D002944 3.9e-08 63.5 180 30.0
BraA08t35004Z Brassica rapa HOM05D009038 ORTHO05D010897 6.7e-08 62.8 172 33.1
A08p30740 Brassica napus HOM05D009038 ORTHO05D010897 8.7e-08 62.4 174 34.5
C08p18180 Brassica napus HOM05D009038 ORTHO05D010897 2.5e-07 60.8 144 35.4
BolC8t49453H Brassica oleracea HOM05D009038 ORTHO05D010897 2.5e-07 60.8 144 35.4
Gohir.A04G038800 Gossypium hirsutum HOM05D008023 ORTHO05D002944 2.5e-07 60.8 215 30.2
BcaC07g38888 Brassica carinata HOM05D009038 ORTHO05D010897 3.3e-07 60.5 144 35.4
ECA240G4386 Erigeron canadensis HOM05D029722 ORTHO05D035124 3.3e-07 60.5 180 33.3
Haze_13348 Corylus avellana HOM05D004563 ORTHO05D002944 4.3e-07 60.1 93 39.8
TAR626G0367 Trochodendron aralioides HOM05D004563 ORTHO05D002944 4.3e-07 60.1 89 44.9
AT2G16575 Arabidopsis thaliana HOM05D009038 ORTHO05D010897 5.7e-07 59.7 161 31.7
HanXRQChr17g0548871 Helianthus annuus HOM05D029722 ORTHO05D035124 5.7e-07 59.7 301 25.2
THA.LOC104823260 Tarenaya hassleriana HOM05D009038 ORTHO05D010897 9.6e-07 58.9 115 36.5
AT1G17780 Arabidopsis thaliana HOM05D009038 ORTHO05D010897 2.8e-06 57.4 123 35.8
TAR629G2655 Trochodendron aralioides HOM05D004563 ORTHO05D002944 2.8e-06 57.4 116 41.4
Migut.M00743 Erythranthe guttata HOM05D008023 ORTHO05D002944 3.7e-06 57.0 242 26.9
Aa31LG4G3400 Aethionema arabicum HOM05D009038 ORTHO05D010897 6.2e-06 56.2 84 36.9
CAN.G456.28 Capsicum annuum HOM05D004563 ORTHO05D002944 6.2e-06 56.2 109 36.7
Dinv14971 Davidia involucrata HOM05D000845 ORTHO05D003813 6.2e-06 56.2 83 44.6


User provided reference genes

Program Settings