Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 1.0e-128 463.4 229 100.0
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 4.6e-89 331.6 255 68.2
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 7.4e-87 324.3 259 63.3
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 9.7e-87 323.9 260 66.2
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 2.2e-86 322.8 260 66.5
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 1.4e-85 320.1 254 63.8
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 1.8e-85 319.7 255 64.3
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 1.3e-83 313.5 251 66.5
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 5.0e-83 311.6 255 64.3
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 5.0e-83 311.6 266 63.2
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 6.5e-83 311.2 253 64.8
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 1.9e-82 309.7 253 64.4
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 1.9e-82 309.7 256 65.2
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 2.5e-82 309.3 252 64.7
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 3.2e-82 308.9 258 64.3
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 4.2e-82 308.5 247 66.4
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 2.1e-81 306.2 258 64.0
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 2.7e-81 305.8 256 62.1
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 4.7e-81 305.1 257 66.1
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 6.1e-81 304.7 201 74.6
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 1.4e-80 303.5 253 62.8
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 3.0e-80 302.4 257 61.1
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 8.8e-80 300.8 256 64.1
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 1.1e-79 300.4 253 63.2
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 9.7e-79 297.4 258 60.5
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 1.3e-78 297.0 286 58.4
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 1.7e-78 296.6 255 61.2
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 2.2e-78 296.2 265 61.1
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 1.1e-77 293.9 256 59.8
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 1.4e-77 293.5 256 61.7
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 1.8e-77 293.1 256 59.8
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 4.1e-77 292.0 259 61.4
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 4.1e-77 292.0 259 61.0
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 1.5e-76 290.0 268 57.8
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 1.5e-76 290.0 259 60.6
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 2.0e-76 289.7 255 59.2
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 4.5e-76 288.5 259 59.5
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 7.7e-76 287.7 255 58.8
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 2.2e-75 286.2 261 59.4
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 5.0e-75 285.0 254 59.4
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 6.5e-75 284.6 254 58.3
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 8.5e-75 284.3 257 58.8
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 1.9e-74 283.1 259 57.1
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.9e-74 283.1 254 58.3
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 1.9e-74 283.1 262 58.4
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 3.2e-74 282.3 254 59.8
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 4.2e-74 282.0 254 59.4
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 4.2e-74 282.0 254 60.6
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 5.5e-74 281.6 254 57.9
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 5.5e-74 281.6 253 60.9
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 7.2e-74 281.2 259 59.5
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 7.2e-74 281.2 262 58.0
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 9.4e-74 280.8 255 60.0
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 9.4e-74 280.8 261 57.1
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 2.1e-73 279.6 255 60.0
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 8.0e-73 277.7 246 61.8
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 1.0e-72 277.3 262 57.3
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 1.4e-72 276.9 252 59.9
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 2.3e-72 276.2 279 55.2
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 3.0e-72 275.8 254 59.1
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 3.9e-72 275.4 254 59.4
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 6.7e-72 274.6 262 56.9
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 1.1e-71 273.9 259 55.2
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 2.6e-71 272.7 256 59.0
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 4.4e-71 271.9 262 55.7
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 7.4e-71 271.2 257 57.6
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 2.2e-70 269.6 256 59.0
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 4.8e-70 268.5 257 57.6
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 1.4e-69 266.9 255 57.6
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 1.4e-69 266.9 259 56.8
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 1.8e-69 266.5 268 54.9
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 9.1e-69 264.2 268 54.5
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 2.0e-68 263.1 277 54.5
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 7.7e-68 261.2 279 53.8
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 7.7e-68 261.2 255 55.3
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 3.8e-67 258.8 254 55.1
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 1.9e-66 256.5 257 54.1
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 5.5e-66 255.0 259 56.4
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 9.4e-66 254.2 252 54.0
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 9.4e-66 254.2 261 53.6
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 1.6e-65 253.4 251 52.6
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 2.7e-65 252.7 263 51.3
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 6.1e-65 251.5 252 54.0
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 6.1e-65 251.5 250 54.4
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 1.2e-63 247.3 268 51.5
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 3.4e-63 245.7 251 49.8
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 4.4e-63 245.4 261 53.3
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 4.8e-62 241.9 251 50.6
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 1.1e-61 240.7 256 51.2
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 2.0e-60 236.5 207 57.5
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 2.9e-59 232.6 195 66.7
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 1.8e-56 223.4 263 47.5
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 3.0e-56 222.6 301 46.2
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 5.2e-56 221.9 214 57.5
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 7.7e-52 208.0 154 65.6
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 6.6e-51 204.9 252 46.8
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 1.5e-50 203.8 247 46.6
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 1.6e-41 173.7 171 51.5
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 2.3e-40 169.9 157 61.1
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 6.6e-35 151.8 187 43.9
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 2.1e-25 120.2 139 48.9
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 8.9e-24 114.8 242 35.1
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 2.6e-23 113.2 234 34.6
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 1.2e-20 104.4 90 55.6
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 3.1e-16 89.7 64 56.2
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 4.4e-15 85.9 130 44.6
Aa31sc72G10 Aethionema arabicum HOM05D002897 ORTHO05D008718 5.1e-11 72.4 129 35.7
BolC6t39233H Brassica oleracea HOM05D002897 ORTHO05D008718 1.4e-08 64.3 44 63.6


User provided reference genes

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